Result : Q5L549
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 50S ribosomal protein L36 |
| NCBI Accession ID | CR848038.1 |
| Organism | Chlamydia abortus (strain DSM 27085 / S26/3) (Chlamydophila abortus) |
| Left | 932656 |
| Right | 932793 |
| Strand | - |
| Nucleotide Sequence | ATGAAAGTGAGTTCATCTATTAAAGCAGATCCTTCAAAGGGAGATAAGCTTGTTCGTCGTAAAGGGCGTCTTTATGTTATCAATAAGATAGACCCCAATCGTAAGCAACGTCAAGCAGGGCCTGCGCGTAAAAAATAA |
| Sequence | MKVSSSIKADPSKGDKLVRRKGRLYVINKIDPNRKQRQAGPARKK |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl00380. Profile Description: Ribosomal protein L36. 50S ribosomal protein L36; Validated |
| Pubmed ID | 15837807 |
| Domain | CDD:412345 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q5L549 |
| ORF Length (Amino Acid) | 45 |
++ More..
| Conservation Analysis |
No. of Species: 428
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 959721 | 959858 | - | NC_017287.1 | Chlamydia psittaci 6BC |
| 2 | 959234 | 959371 | - | NC_003361.3 | Chlamydia caviae GPIC |
| 3 | 211621 | 211758 | + | NC_007899.1 | Chlamydia felis Fe/C-56 |
| 4 | 901478 | 901615 | - | NC_022439.1 | Chlamydia pecorum PV3056/3 |
| 5 | 224347 | 224484 | - | NZ_CP015840.1 | Chlamydia gallinacea 08-1274/3 |
| 6 | 1066686 | 1066823 | + | NC_005043.1 | Chlamydia pneumoniae TW-183 |
| 7 | 921655 | 921792 | + | NC_000117.1 | Chlamydia trachomatis D/UW-3/CX |
| 8 | 981155 | 981292 | + | NZ_LS398098.1 | Chlamydia suis |
| 9 | 201167 | 201304 | + | NC_002620.2 | Chlamydia muridarum str. Nigg |
| 10 | 873367 | 873504 | - | NC_014225.1 | Waddlia chondrophila WSU 86-1044 |
| 11 | 1914917 | 1915054 | - | NC_015713.1 | Simkania negevensis Z |
| 12 | 2106285 | 2106422 | + | NC_015702.1 | Parachlamydia acanthamoebae UV-7 |
| 13 | 3585838 | 3585963 | - | NZ_CP031356.1 | Brachybacterium saurashtrense |
| 14 | 1505135 | 1505251 | + | NZ_CP006828.1 | Ornithobacterium rhinotracheale ORT-UMN 88 |
| 15 | 977339 | 977455 | + | NC_013501.1 | Rhodothermus marinus DSM 4252 |
| 16 | 1114648 | 1114764 | - | NZ_CP013355.1 | Lutibacter profundi |
| 17 | 3279109 | 3279225 | + | NZ_CP017478.1 | Urechidicola croceus |
| 18 | 2808547 | 2808663 | - | NZ_CP014224.1 | Wenyingzhuangia fucanilytica |
| 19 | 1474348 | 1474464 | + | NC_013222.1 | Robiginitalea biformata HTCC2501 |
| 20 | 2434941 | 2435057 | + | NC_015167.1 | Cellulophaga lytica DSM 7489 |
| 21 | 879893 | 880009 | - | NZ_CP030104.1 | Flagellimonas maritima |
| 22 | 212679 | 212795 | - | NZ_CP034930.1 | Apibacter raozihei |
| 23 | 504948 | 505073 | + | NZ_CP024201.1 | Caulobacter mirabilis |
| 24 | 1069375 | 1069491 | - | NC_018721.1 | Psychroflexus torquis ATCC 700755 |
| 25 | 830953 | 831069 | + | NZ_CP053348.1 | Winogradskyella forsetii |
| 26 | 1601593 | 1601709 | + | NZ_CP053352.1 | Winogradskyella helgolandensis |
| 27 | 801455 | 801571 | + | NZ_CP053351.1 | Winogradskyella schleiferi |
| 28 | 1305803 | 1305919 | + | NC_011026.1 | Chloroherpeton thalassium ATCC 35110 |
| 29 | 422664 | 422780 | - | NC_015501.1 | Porphyromonas asaccharolytica DSM 20707 |
| 30 | 3229444 | 3229560 | + | NZ_CP042476.1 | Antarcticibacterium arcticum |
| 31 | 1692309 | 1692425 | - | NZ_CP040812.1 | Antarcticibacterium flavum |
| 32 | 3714699 | 3714824 | - | NZ_CP041690.1 | Youhaiella tibetensis |
| 33 | 2502995 | 2503120 | + | NZ_CP068983.1 | Paradevosia shaoguanensis |
| 34 | 1536573 | 1536689 | - | NZ_AP018042.1 | Labilibaculum antarcticum |
| 35 | 769939 | 770055 | - | NZ_CP011071.1 | Muricauda lutaonensis |
| 36 | 3405929 | 3406045 | + | NZ_CP037933.1 | Flavobacterium nackdongense |
| 37 | 1672497 | 1672613 | - | NZ_CP011390.1 | Flavisolibacter tropicus |
| 38 | 5574649 | 5574765 | - | NC_016609.1 | Niastella koreensis GR20-10 |
| 39 | 75522 | 75638 | + | NZ_CP018155.1 | Tenacibaculum todarodis |
| 40 | 2731741 | 2731857 | - | NZ_CP034549.1 | Nonlabens ponticola |
| 41 | 588142 | 588258 | - | NC_020156.1 | Nonlabens dokdonensis DSW-6 |
| 42 | 919056 | 919172 | - | NZ_CP016359.1 | Gramella flava JLT2011 |
| 43 | 1309766 | 1309882 | + | NC_014230.1 | Croceibacter atlanticus HTCC2559 |
| 44 | 2809892 | 2810008 | + | NZ_CP018153.1 | Gramella salexigens |
| 45 | 1970570 | 1970686 | + | NZ_CP061703.1 | Mesoflavibacter profundi |
| 46 | 2933171 | 2933287 | - | NC_008571.1 | Gramella forsetii KT0803 |
| 47 | 714837 | 714953 | - | NC_015945.1 | Muricauda ruestringensis DSM 13258 |
| 48 | 413156 | 413272 | - | NZ_CP028136.1 | Gramella fulva |
| 49 | 810004 | 810120 | - | NZ_CP022957.1 | Maribacter cobaltidurans |
| 50 | 4160303 | 4160419 | - | NC_014041.1 | Zunongwangia profunda SM-A87 |
| 51 | 8108869 | 8108985 | + | NZ_CP032157.1 | Paraflavitalea soli |
| 52 | 2267331 | 2267447 | - | NZ_CP019288.1 | Kordia antarctica |
| 53 | 28935 | 29051 | + | NZ_CP034562.1 | Flammeovirga pectinis |
| 54 | 1340083 | 1340199 | - | NZ_LR134506.1 | Porphyromonas cangingivalis |
| 55 | 1457490 | 1457606 | + | NZ_CP015125.1 | Dokdonia donghaensis DSW-1 |
| 56 | 1381993 | 1382109 | + | NC_013162.1 | Capnocytophaga ochracea DSM 7271 |
| 57 | 2062973 | 2063089 | + | NZ_CP022379.1 | Capnocytophaga sputigena |
| 58 | 3305885 | 3306001 | - | NZ_CP022022.1 | Capnocytophaga endodontalis |
| 59 | 381690 | 381806 | - | NZ_LS483447.1 | Porphyromonas crevioricanis |
| 60 | 3698418 | 3698534 | + | NZ_CP013118.1 | Salinivirga cyanobacteriivorans |
| 61 | 3101732 | 3101848 | + | NZ_CP015402.2 | Muribaculum intestinale |
| 62 | 1726506 | 1726622 | - | NZ_CP061813.1 | Polaribacter haliotis |
| 63 | 3589927 | 3590043 | + | NZ_CP017477.1 | Polaribacter vadi |
| 64 | 333137 | 333253 | - | NZ_CP019419.1 | Polaribacter reichenbachii |
| 65 | 1135639 | 1135755 | - | NC_017045.1 | Riemerella anatipestifer ATCC 11845 = DSM 15868 |
| 66 | 1631442 | 1631558 | - | NZ_LR134404.1 | Weeksella virosa |
| 67 | 103997 | 104113 | + | NZ_CP053698.1 | Empedobacter stercoris |
| 68 | 471640 | 471756 | + | NZ_CP040908.1 | Empedobacter falsenii |
| 69 | 45423 | 45539 | - | NZ_CP013210.1 | Empedobacter brevis |
| 70 | 2541733 | 2541849 | - | NZ_CP015067.2 | Elizabethkingia anophelis |
| 71 | 4178512 | 4178628 | + | NZ_CP014337.1 | Elizabethkingia bruuniana |
| 72 | 2067093 | 2067209 | + | NC_018013.1 | Aequorivita sublithincola DSM 14238 |
| 73 | 1190445 | 1190561 | - | NZ_CP021904.1 | Alkalitalea saponilacus |
| 74 | 2389527 | 2389643 | + | NZ_CP037755.1 | Pseudocnuella soli |
| 75 | 2987077 | 2987193 | + | NC_015844.1 | Zobellia galactanivorans |
| 76 | 226538 | 226654 | - | NZ_CP007202.1 | Siansivirga zeaxanthinifaciens CC-SAMT-1 |
| 77 | 2686412 | 2686528 | + | NZ_CP058595.1 | Costertonia aggregata |
| 78 | 1699840 | 1699956 | + | NZ_CP041637.1 | Formosa sediminum |
| 79 | 3386867 | 3386983 | + | NZ_CP012898.1 | Algibacter alginicilyticus |
| 80 | 788857 | 788973 | - | NZ_CP025938.1 | Tamlana carrageenivorans |
| 81 | 3984597 | 3984713 | - | NZ_CP032050.1 | Euzebyella marina |
| 82 | 2518873 | 2518998 | - | NZ_CP042304.1 | Devosia ginsengisoli |
| 83 | 4434801 | 4434917 | - | NZ_CP060723.1 | Pedobacter roseus |
| 84 | 1185091 | 1185207 | + | NZ_CP017688.1 | Flavobacterium crassostreae |
| 85 | 3353239 | 3353364 | + | NZ_CP023564.1 | Brachybacterium ginsengisoli |
| 86 | 2072591 | 2072707 | - | NC_010729.1 | Porphyromonas gingivalis ATCC 33277 |
| 87 | 361369 | 361485 | + | NZ_CP019342.1 | Nonlabens tegetincola |
| 88 | 3799995 | 3800111 | - | NZ_LT899436.1 | Tenacibaculum jejuense |
| 89 | 241525 | 241641 | - | NZ_CP009976.1 | Cellulophaga baltica 18 |
| 90 | 702671 | 702787 | - | NC_014934.1 | Cellulophaga algicola DSM 14237 |
| 91 | 4166743 | 4166859 | + | NZ_CP025791.1 | Flavivirga eckloniae |
| 92 | 2738096 | 2738212 | - | NZ_CP041345.1 | Tenuifilum thalassicum |
| 93 | 3236492 | 3236617 | + | NC_012982.1 | Hirschia baltica ATCC 49814 |
| 94 | 2125191 | 2125307 | + | NZ_CP042433.1 | Flavisolibacter ginsenosidimutans |
| 95 | 3039336 | 3039461 | + | NZ_HG938353.1 | Neorhizobium galegae bv. orientalis str. HAMBI 540 |
| 96 | 1487162 | 1487287 | - | NZ_LN849456.1 | Devriesea agamarum |
| 97 | 5269505 | 5269621 | + | NZ_CP048222.1 | Rhodocytophaga rosea |
| 98 | 1797956 | 1798072 | + | NZ_CP020105.1 | Spirosoma rigui |
| 99 | 450426 | 450542 | - | NZ_CP020104.1 | Spirosoma aerolatum |
| 100 | 734002 | 734118 | + | NC_013061.1 | Pedobacter heparinus DSM 2366 |
| 101 | 5055687 | 5055803 | + | NZ_CP024091.1 | Pedobacter ginsengisoli |
| 102 | 3214003 | 3214119 | - | NZ_CP054012.1 | Parabacteroides distasonis |
| 103 | 876410 | 876526 | + | NZ_CP019352.1 | Lacinutrix venerupis |
| 104 | 834830 | 834946 | - | NZ_CP039456.1 | Changchengzhania lutea |
| 105 | 2349419 | 2349541 | + | NZ_LT906453.1 | Dermatophilus congolensis |
| 106 | 2174692 | 2174808 | - | NZ_CP020822.1 | Tenacibaculum maritimum |
| 107 | 1594078 | 1594200 | - | NZ_LS483427.1 | Arcanobacterium haemolyticum |
| 108 | 860722 | 860838 | - | NZ_CP054494.1 | Flavobacterium columnare |
| 109 | 3546190 | 3546315 | - | NC_011144.1 | Phenylobacterium zucineum HLK1 |
| 110 | 2846766 | 2846882 | - | NZ_LT608328.1 | Petrimonas mucosa |
| 111 | 3041943 | 3042068 | + | NZ_CP016094.1 | Lacunisphaera limnophila |
| 112 | 1023447 | 1023563 | + | NZ_LT605205.1 | Proteiniphilum saccharofermentans |
| 113 | 4615323 | 4615448 | - | NZ_CP020330.1 | Martelella mediterranea DSM 17316 |
| 114 | 1352553 | 1352669 | + | NZ_CP038810.1 | Flavobacterium sangjuense |
| 115 | 2989414 | 2989530 | + | NC_014734.1 | Paludibacter propionicigenes WB4 |
| 116 | 3653577 | 3653693 | + | NZ_CP047897.1 | Nibribacter ruber |
| 117 | 283458 | 283574 | + | NZ_CP010777.1 | Rufibacter radiotolerans |
| 118 | 2883947 | 2884063 | + | NZ_CP012643.1 | Rufibacter tibetensis |
| 119 | 1982961 | 1983077 | + | NZ_CP009621.1 | Pontibacter korlensis |
| 120 | 5135183 | 5135299 | - | NZ_CP055153.1 | Adhaeribacter radiodurans |
| 121 | 505124 | 505249 | - | NZ_CP010803.1 | Martelella endophytica |
| 122 | 1259301 | 1259417 | + | NZ_CP012836.1 | Algoriphagus sanaruensis |
| 123 | 1908391 | 1908507 | - | NC_015703.1 | Runella slithyformis DSM 19594 |
| 124 | 4499693 | 4499809 | + | NZ_CP021235.1 | Pontibacter actiniarum |
| 125 | 1090728 | 1090844 | + | NZ_AP014564.1 | Ichthyobacterium seriolicida |
| 126 | 2484807 | 2484923 | - | NC_015177.1 | Pseudopedobacter saltans DSM 12145 |
| 127 | 1444355 | 1444471 | - | NZ_CP032382.1 | Chryseolinea soli |
| 128 | 247761 | 247877 | - | NC_019904.1 | Echinicola vietnamensis DSM 17526 |
| 129 | 245304 | 245420 | - | NZ_CP040106.1 | Echinicola rosea |
| 130 | 3044689 | 3044805 | + | NC_015914.1 | Cyclobacterium marinum DSM 745 |
| 131 | 169178 | 169294 | - | NZ_CP028811.1 | Flavobacterium magnum |
| 132 | 160764 | 160880 | - | NZ_CP029187.1 | Flavobacterium pallidum |
| 133 | 671521 | 671637 | + | NC_017025.1 | Flavobacterium indicum GPTSA100-9 = DSM 17447 |
| 134 | 809570 | 809686 | - | NZ_CP029463.1 | Flavobacterium sediminis |
| 135 | 2984472 | 2984588 | - | NC_016001.1 | Flavobacterium branchiophilum FL-15 |
| 136 | 2051411 | 2051527 | + | NZ_CP039934.1 | Myroides fluvii |
| 137 | 824376 | 824492 | - | NZ_CP017774.1 | Flavobacterium commune |
| 138 | 255105 | 255221 | - | NZ_CP029186.1 | Flavobacterium album |
| 139 | 1678816 | 1678932 | + | NZ_CP042831.1 | Flavobacterium alkalisoli |
| 140 | 3465706 | 3465822 | - | NZ_CP010817.1 | Myroides profundi |
| 141 | 1732269 | 1732385 | + | NZ_CP020918.1 | Flavobacterium faecale |
| 142 | 2436984 | 2437100 | + | NZ_CP016907.1 | Flavobacterium anhuiense |
| 143 | 2355788 | 2355904 | + | NZ_CP043612.1 | Flavobacterium nitrogenifigens |
| 144 | 404430 | 404546 | - | NZ_CP029255.1 | Flavobacterium crocinum |
| 145 | 396894 | 397010 | - | NC_009441.1 | Flavobacterium johnsoniae UW101 |
| 146 | 2499996 | 2500121 | - | NC_007626.1 | Magnetospirillum magneticum AMB-1 |
| 147 | 41504 | 41638 | - | NZ_CP032091.1 | Pseudoalteromonas donghaensis |
| 148 | 1113877 | 1113993 | + | NZ_AP017313.1 | Mucilaginibacter gotjawali |
| 149 | 4038910 | 4039026 | - | NZ_CP007145.1 | Hymenobacter swuensis DY53 |
| 150 | 718252 | 718377 | + | NZ_CP023344.1 | Nibricoccus aquaticus |
| 151 | 3055533 | 3055649 | + | NZ_CP012040.1 | Cyclobacterium amurskyense |
| 152 | 2025197 | 2025313 | - | NZ_CP030041.1 | Echinicola strongylocentroti |
| 153 | 357203 | 357328 | + | NZ_CP015318.1 | Mesorhizobium amorphae CCNWGS0123 |
| 154 | 1513635 | 1513751 | + | NZ_AP017422.1 | Filimonas lacunae |
| 155 | 3774874 | 3774990 | + | NZ_CP032317.1 | Hymenobacter oligotrophus |
| 156 | 1845730 | 1845846 | - | NZ_CP050954.1 | Hymenobacter sp. BT18 |
| 157 | 3375030 | 3375152 | - | NZ_CP022521.1 | Actinoalloteichus hoggarensis |
| 158 | 2857041 | 2857157 | - | NZ_CP029145.1 | Hymenobacter nivis |
| 159 | 913716 | 913838 | - | NZ_AP012331.1 | Bifidobacterium scardovii JCM 12489 = DSM 13734 |
| 160 | 5660001 | 5660126 | + | NZ_CP015064.1 | Mesorhizobium ciceri biovar biserrulae |
| 161 | 3259976 | 3260092 | - | NZ_CP032489.1 | Arachidicoccus soli |
| 162 | 367646 | 367768 | + | NC_022438.1 | Leifsonia xyli subsp. cynodontis DSM 46306 |
| 163 | 2018311 | 2018436 | - | NZ_CP049241.1 | Rhizobium pseudoryzae |
| 164 | 2738255 | 2738380 | + | NZ_LR723670.1 | Pseudorhizobium flavum |
| 165 | 2619431 | 2619556 | + | NZ_FO082820.1 | Pseudorhizobium banfieldiae |
| 166 | 189462 | 189578 | - | NZ_CP017479.1 | Flavobacterium gilvum |
| 167 | 2114279 | 2114395 | + | NZ_CP022389.1 | Capnocytophaga canimorsus |
| 168 | 1938396 | 1938512 | + | NZ_CP013909.1 | Hymenobacter sedentarius |
| 169 | 1998586 | 1998702 | + | NZ_CP007034.1 | Barnesiella viscericola DSM 18177 |
| 170 | 3290864 | 3290980 | + | NZ_CP047984.1 | Pontibacter russatus |
| 171 | 1087723 | 1087839 | - | NZ_CP063145.1 | Cruoricaptor ignavus |
| 172 | 3453065 | 3453181 | + | NC_016599.1 | Owenweeksia hongkongensis DSM 17368 |
| 173 | 1904087 | 1904203 | - | NC_014655.1 | Leadbetterella byssophila DSM 17132 |
| 174 | 3054415 | 3054531 | + | NZ_CP007451.1 | Draconibacterium orientale |
| 175 | 331943 | 332068 | + | NZ_CP018171.1 | Mesorhizobium oceanicum |
| 176 | 1377186 | 1377302 | - | NZ_CP027231.1 | Bacteroides zoogleoformans |
| 177 | 1523382 | 1523498 | - | NZ_CP027234.1 | Bacteroides heparinolyticus |
| 178 | 1367718 | 1367834 | + | NC_014933.1 | Bacteroides helcogenes P 36-108 |
| 179 | 3253902 | 3254018 | - | NZ_CP069440.1 | Phocaeicola coprophilus |
| 180 | 3837664 | 3837780 | - | NZ_CP015401.2 | Bacteroides caecimuris |
| 181 | 1089913 | 1090029 | - | NC_009614.1 | Phocaeicola vulgatus ATCC 8482 |
| 182 | 4676436 | 4676552 | - | NZ_LN877293.1 | Bacteroides fragilis |
| 183 | 1094375 | 1094491 | - | NZ_LR699004.1 | Phocaeicola dorei |
| 184 | 669656 | 669772 | - | NZ_CP040530.1 | Bacteroides thetaiotaomicron |
| 185 | 3400403 | 3400519 | - | NZ_CP012938.1 | Bacteroides ovatus |
| 186 | 1947344 | 1947460 | + | NZ_LT906449.1 | Capnocytophaga haemolytica |
| 187 | 2944817 | 2944933 | + | NZ_CP045696.1 | Sodaliphilus pleomorphus |
| 188 | 2681996 | 2682112 | - | NZ_CP007035.1 | Niabella soli DSM 19437 |
| 189 | 591710 | 591826 | - | NZ_CP031188.1 | Flavobacterium arcticum |
| 190 | 772151 | 772276 | + | NZ_CP053857.1 | Rhizobium pusense |
| 191 | 850805 | 850930 | + | NZ_CP061004.1 | Agrobacterium tumefaciens |
| 192 | 1039790 | 1039912 | - | NZ_CP016895.1 | Acinetobacter larvae |
| 193 | 2522358 | 2522474 | + | NZ_CP014766.1 | Pontibacter akesuensis |
| 194 | 681624 | 681740 | + | NZ_CP037922.1 | Hymenobacter radiodurans |
| 195 | 2856801 | 2856917 | + | NZ_CP040896.1 | Hymenobacter jejuensis |
| 196 | 513229 | 513345 | - | NZ_CP055156.1 | Adhaeribacter swui |
| 197 | 215017 | 215133 | + | NZ_CP015772.1 | Niabella ginsenosidivorans |
| 198 | 5281475 | 5281591 | + | NC_013037.1 | Dyadobacter fermentans DSM 18053 |
| 199 | 1492375 | 1492491 | - | NZ_CP022386.1 | Capnocytophaga gingivalis |
| 200 | 1438920 | 1439045 | - | NC_019973.1 | Mesorhizobium australicum WSM2073 |
| 201 | 1875219 | 1875335 | - | NZ_CP042435.1 | Panacibacter ginsenosidivorans |
| 202 | 3150694 | 3150810 | + | NZ_CP042434.1 | Arachidicoccus ginsenosidivorans |
| 203 | 2009524 | 2009640 | + | NZ_CP020919.1 | Flavobacterium kingsejongi |
| 204 | 1003529 | 1003654 | - | NZ_CP047045.1 | Terricaulis silvestris |
| 205 | 6023899 | 6024015 | + | NC_015510.1 | Haliscomenobacter hydrossis DSM 1100 |
| 206 | 3754182 | 3754298 | - | NZ_CP025096.1 | Spirosoma pollinicola |
| 207 | 1447536 | 1447652 | - | NZ_CP037899.1 | Methylacidiphilum kamchatkense Kam1 |
| 208 | 1691174 | 1691290 | - | NZ_CP042437.1 | Mucilaginibacter ginsenosidivorax |
| 209 | 5539308 | 5539424 | + | NZ_CP014263.1 | Spirosoma montaniterrae |
| 210 | 369570 | 369686 | + | NZ_CP034120.1 | Glaciecola amylolytica |
| 211 | 6245116 | 6245232 | + | NZ_CP010429.1 | Spirosoma radiotolerans |
| 212 | 1537116 | 1537238 | + | NZ_CP009312.1 | Lawsonella clevelandensis |
| 213 | 1260423 | 1260539 | - | NZ_LR884459.1 | Psychrobacter arenosus |
| 214 | 2147714 | 2147836 | - | NZ_AP012326.1 | Bifidobacterium dentium JCM 1195 = DSM 20436 |
| 215 | 2130918 | 2131034 | - | NZ_CP066775.1 | Mucilaginibacter ginkgonis |
| 216 | 5079679 | 5079795 | - | NZ_CP042436.1 | Mucilaginibacter ginsenosidivorans |
| 217 | 3976767 | 3976883 | - | NZ_CP054139.1 | Mucilaginibacter mali |
| 218 | 6722210 | 6722326 | + | NZ_CP032869.1 | Mucilaginibacter celer |
| 219 | 3752394 | 3752510 | - | NZ_CP071878.1 | Mucilaginibacter gossypii |
| 220 | 1616009 | 1616131 | + | NZ_CP020468.1 | Actinomyces gaoshouyii |
| 221 | 86702 | 86818 | + | NZ_CP053435.1 | Spirosoma taeanense |
| 222 | 165905 | 166021 | - | NZ_CP050063.1 | Spirosoma aureum |
| 223 | 3548021 | 3548137 | - | NC_017770.1 | Solitalea canadensis DSM 3403 |
| 224 | 1547820 | 1547936 | + | NZ_CP036299.1 | Planctopirus ephydatiae |
| 225 | 616600 | 616716 | + | NC_014148.1 | Planctopirus limnophila DSM 3776 |
| 226 | 2310161 | 2310277 | - | NC_015164.1 | Phocaeicola salanitronis DSM 18170 |
| 227 | 4564660 | 4564785 | - | NZ_CP042906.1 | Hypericibacter terrae |
| 228 | 2132496 | 2132621 | - | NZ_CP029479.1 | Phenylobacterium parvum |
| 229 | 2742890 | 2743006 | - | NZ_CP023049.2 | Chryseobacterium piperi |
| 230 | 3602245 | 3602361 | + | NC_014759.1 | Marivirga tractuosa DSM 4126 |
| 231 | 1508568 | 1508684 | - | NZ_CP015199.1 | Chryseobacterium glaciei |
| 232 | 4199792 | 4199917 | - | NZ_AP019700.1 | Stella humosa |
| 233 | 1982589 | 1982705 | + | NZ_LT906465.1 | Chryseobacterium taklimakanense |
| 234 | 2752407 | 2752523 | + | NZ_LR134441.1 | Kaistella antarctica |
| 235 | 3256831 | 3256947 | - | NZ_CP034161.1 | Epilithonimonas vandammei |
| 236 | 1715416 | 1715532 | - | NZ_LR134503.1 | Kaistella jeonii |
| 237 | 1876523 | 1876639 | - | NZ_LR215974.1 | Chryseobacterium taihuense |
| 238 | 754277 | 754393 | + | NZ_CP033929.1 | Chryseobacterium indoltheticum |
| 239 | 2736101 | 2736217 | - | NZ_CP050995.1 | Chryseobacterium gallinarum |
| 240 | 4022885 | 4023001 | - | NZ_CP033914.1 | Chryseobacterium shandongense |
| 241 | 3686752 | 3686868 | + | NZ_CP033926.1 | Chryseobacterium joostei |
| 242 | 1706242 | 1706358 | + | NZ_CP033932.1 | Chryseobacterium bernardetii |
| 243 | 808675 | 808791 | - | NZ_CP033920.1 | Chryseobacterium carnipullorum |
| 244 | 706248 | 706364 | + | NZ_LR134386.1 | Chryseobacterium nakagawai |
| 245 | 4050783 | 4050899 | + | NZ_LR134289.1 | Chryseobacterium gleum |
| 246 | 1841842 | 1841958 | + | NZ_CP033924.1 | Chryseobacterium lactis |
| 247 | 871695 | 871811 | - | NC_015321.1 | Fluviicola taffensis DSM 16823 |
| 248 | 314745 | 314867 | + | NZ_LT906473.1 | Corynebacterium cystitidis |
| 249 | 375523 | 375639 | - | NZ_CP044285.1 | Hymenobacter baengnokdamensis |
| 250 | 4477899 | 4478024 | - | NZ_CP042582.1 | Hypericibacter adhaerens |
| 251 | 1842131 | 1842247 | - | NC_016940.1 | Saprospira grandis str. Lewin |
| 252 | 417829 | 417954 | + | NZ_CP013002.1 | Caulobacter henricii |
| 253 | 763242 | 763367 | + | NZ_CP029426.1 | Bradyrhizobium amphicarpaeae |
| 254 | 6377653 | 6377778 | - | NC_017082.1 | Bradyrhizobium cosmicum |
| 255 | 3659399 | 3659524 | + | NZ_CP029425.1 | Bradyrhizobium ottawaense |
| 256 | 1552464 | 1552589 | + | NZ_CP022221.1 | Bradyrhizobium zhanjiangense |
| 257 | 1830863 | 1830979 | + | NC_018010.1 | Belliella baltica DSM 15883 |
| 258 | 3183458 | 3183574 | + | NZ_CP022986.1 | Chryseobacterium camelliae |
| 259 | 595939 | 596052 | + | NZ_LT859958.1 | Brevefilum fermentans |
| 260 | 794654 | 794779 | + | NZ_LR588407.1 | Brevundimonas vancanneytii |
| 261 | 4568838 | 4568954 | - | NZ_CP022743.1 | Mucilaginibacter xinganensis |
| 262 | 4751242 | 4751367 | - | NZ_CP048815.1 | Caulobacter rhizosphaerae |
| 263 | 1356121 | 1356237 | + | NZ_CP049246.1 | Sphingobacterium lactis |
| 264 | 524965 | 525081 | + | NZ_CP038029.1 | Sphingobacterium psychroaquaticum |
| 265 | 843872 | 843988 | + | NZ_CP030848.1 | Sphingobacterium hotanense |
| 266 | 3964089 | 3964205 | - | NZ_LR590470.1 | Sphingobacterium daejeonense |
| 267 | 1116884 | 1117000 | - | NZ_LR590484.1 | Sphingobacterium thalpophilum |
| 268 | 4289876 | 4290001 | + | NC_020908.1 | Octadecabacter arcticus 238 |
| 269 | 2185504 | 2185629 | - | NZ_CP044543.1 | Bradyrhizobium betae |
| 270 | 1291036 | 1291158 | - | NZ_CP007519.1 | Trueperella pyogenes |
| 271 | 2186813 | 2186935 | - | NZ_CP009247.1 | Corynebacterium frankenforstense DSM 45800 |
| 272 | 5174550 | 5174672 | + | NC_009142.1 | Saccharopolyspora erythraea NRRL 2338 |
| 273 | 2321725 | 2321841 | + | NZ_CP023777.1 | Chitinophaga caeni |
| 274 | 1861828 | 1861950 | + | NZ_CP035806.1 | Leucobacter triazinivorans |
| 275 | 1192082 | 1192204 | + | NZ_CP015961.1 | Dietzia timorensis |
| 276 | 529278 | 529400 | + | NZ_CP014209.1 | Isoptericola dokdonensis DS-3 |
| 277 | 2446879 | 2446995 | + | NC_015174.1 | Rubinisphaera brasiliensis DSM 5305 |
| 278 | 1671967 | 1672092 | + | NC_014816.1 | Asticcacaulis excentricus CB 48 |
| 279 | 1822269 | 1822391 | - | NZ_CP033897.1 | Corynebacterium gerontici |
| 280 | 92872 | 92997 | - | NZ_CP041636.1 | Ferrovibrio terrae |
| 281 | 6673664 | 6673789 | - | NZ_CP030051.1 | Bradyrhizobium guangdongense |
| 282 | 856528 | 856644 | - | NZ_AP023049.1 | Alistipes indistinctus |
| 283 | 2799339 | 2799455 | - | NZ_CP048106.1 | Pontibacter pudoricolor |
| 284 | 1679257 | 1679382 | + | NC_010103.1 | Brucella canis ATCC 23365 |
| 285 | 1681255 | 1681380 | + | NC_004310.3 | Brucella suis 1330 |
| 286 | 1687857 | 1687982 | + | NC_009505.1 | Brucella ovis ATCC 25840 |
| 287 | 1688783 | 1688908 | + | NC_013119.1 | Brucella microti CCM 4915 |
| 288 | 307873 | 307998 | - | NC_003317.1 | Brucella melitensis bv. 1 str. 16M |
| 289 | 305997 | 306122 | - | NC_022905.1 | Brucella ceti TE10759-12 |
| 290 | 1695333 | 1695458 | + | NC_007618.1 | Brucella abortus 2308 |
| 291 | 1000345 | 1000470 | - | NZ_LT605585.1 | Brucella inopinata |
| 292 | 2173017 | 2173133 | - | NZ_LR215980.1 | Paraprevotella xylaniphila YIT 11841 |
| 293 | 2144120 | 2144242 | - | NZ_CP035495.1 | Xylanimonas allomyrinae |
| 294 | 1064688 | 1064813 | + | NZ_CP044117.1 | Roseomonas mucosa |
| 295 | 8266598 | 8266723 | - | NZ_CP058354.1 | Bradyrhizobium japonicum |
| 296 | 4599969 | 4600094 | - | NZ_CP058907.1 | Rhodopseudomonas palustris |
| 297 | 5597630 | 5597752 | - | NZ_CP033972.1 | Gordonia insulae |
| 298 | 1044356 | 1044481 | + | NZ_LS398110.1 | Bradyrhizobium vignae |
| 299 | 8909436 | 8909561 | - | NZ_CP030050.1 | Bradyrhizobium arachidis |
| 300 | 2005238 | 2005363 | + | NZ_CP022604.1 | [Ochrobactrum] quorumnocens |
| 301 | 1347577 | 1347693 | - | NC_010794.1 | Methylacidiphilum infernorum V4 |
| 302 | 4325595 | 4325711 | + | NZ_CP043930.1 | Gimesia benthica |
| 303 | 1836525 | 1836647 | - | NC_017301.2 | Corynebacterium pseudotuberculosis C231 |
| 304 | 602982 | 603107 | + | NZ_CP022219.1 | Bradyrhizobium guangxiense |
| 305 | 1849225 | 1849350 | - | NC_016026.1 | Micavibrio aeruginosavorus ARL-13 |
| 306 | 1915741 | 1915863 | - | NZ_LR738855.1 | Corynebacterium rouxii |
| 307 | 1880652 | 1880774 | - | NZ_LN831026.1 | Corynebacterium diphtheriae |
| 308 | 606433 | 606549 | + | NC_007204.1 | Psychrobacter arcticus 273-4 |
| 309 | 572457 | 572579 | + | NZ_CP046883.1 | Corynebacterium anserum |
| 310 | 479606 | 479728 | + | NZ_CP033898.1 | Corynebacterium pseudopelargi |
| 311 | 513629 | 513751 | + | NZ_CP035299.1 | Corynebacterium pelargi |
| 312 | 2785861 | 2785983 | - | NZ_CP011542.1 | Corynebacterium mustelae |
| 313 | 1879381 | 1879506 | - | NZ_CP026100.1 | Caulobacter flavus |
| 314 | 972917 | 973039 | - | NZ_CP039292.1 | Actinomyces procaprae |
| 315 | 1124275 | 1124397 | + | NZ_CP015453.1 | Dietzia psychralcaliphila |
| 316 | 625989 | 626105 | + | NZ_CP004387.1 | Alcanivorax pacificus W11-5 |
| 317 | 938484 | 938606 | - | NZ_LT906443.1 | Corynebacterium ulcerans |
| 318 | 5561689 | 5561805 | + | NZ_CP036275.1 | Maioricimonas rarisocia |
| 319 | 2333663 | 2333785 | - | NZ_CP009245.1 | Corynebacterium aquilae DSM 44791 |
| 320 | 1077822 | 1077947 | + | NC_007406.1 | Nitrobacter winogradskyi Nb-255 |
| 321 | 7826763 | 7826879 | - | NZ_CP017641.1 | Fuerstia marisgermanicae |
| 322 | 1002559 | 1002675 | - | NZ_LR215050.1 | Acholeplasma hippikon |
| 323 | 785664 | 785780 | - | NZ_CP022378.1 | Capnocytophaga cynodegmi |
| 324 | 25956 | 26078 | + | NZ_CP069485.1 | Corynebacterium glucuronolyticum |
| 325 | 5876861 | 5876977 | + | NZ_CP048113.1 | Chitinophaga agri |
| 326 | 1977287 | 1977403 | + | NC_013132.1 | Chitinophaga pinensis DSM 2588 |
| 327 | 2772478 | 2772621 | + | NZ_CP037951.1 | Parashewanella tropica |
| 328 | 1034973 | 1035116 | - | NZ_CP037951.1 | Parashewanella tropica |
| 329 | 2625636 | 2625752 | - | NZ_CP029480.1 | Arcticibacterium luteifluviistationis |
| 330 | 747606 | 747728 | - | NZ_CP066802.1 | Actinomyces weissii |
| 331 | 774852 | 774974 | - | NZ_CP025227.1 | Actinomyces wuliandei |
| 332 | 96157 | 96273 | + | NC_010163.1 | Acholeplasma laidlawii PG-8A |
| 333 | 1045081 | 1045203 | - | NZ_LT906481.1 | Corynebacterium urealyticum |
| 334 | 2085683 | 2085805 | - | NZ_CP019688.1 | Corynebacterium glaucum |
| 335 | 494419 | 494541 | + | NC_015673.1 | Corynebacterium resistens DSM 45100 |
| 336 | 741647 | 741769 | + | NC_021663.1 | Corynebacterium terpenotabidum Y-11 |
| 337 | 1141151 | 1141267 | - | NZ_CP012074.1 | Prevotella fusca JCM 17724 |
| 338 | 443901 | 444017 | + | NZ_CP023863.1 | Prevotella jejuni |
| 339 | 121482 | 121598 | - | NZ_CP069450.1 | Butyricimonas virosa |
| 340 | 3503456 | 3503572 | + | NZ_CP032819.1 | Butyricimonas faecalis |
| 341 | 2094167 | 2094292 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 342 | 243169 | 243285 | + | NC_016621.1 | Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu |
| 343 | 247105 | 247221 | + | NZ_CP029844.1 | Blattabacterium clevelandi |
| 344 | 1992058 | 1992174 | + | NZ_CP022387.1 | Capnocytophaga stomatis |
| 345 | 3630529 | 3630645 | + | NC_018018.1 | Bernardetia litoralis DSM 6794 |
| 346 | 453727 | 453843 | + | NC_014370.1 | Prevotella melaninogenica ATCC 25845 |
| 347 | 6742635 | 6742751 | - | NZ_CP036276.1 | Symmachiella dynata |
| 348 | 1249794 | 1249916 | + | NZ_CP038157.1 | Corynebacterium sanguinis |
| 349 | 1687870 | 1687992 | + | NZ_CP048813.1 | Rhodococcus triatomae |
| 350 | 4541980 | 4542096 | - | NZ_CP036281.1 | Polystyrenella longa |
| 351 | 700033 | 700161 | - | NC_013532.1 | Anaplasma centrale str. Israel |
| 352 | 513549 | 513674 | + | NZ_CP006954.1 | Bibersteinia trehalosi USDA-ARS-USMARC-188 |
| 353 | 1404195 | 1404311 | + | NZ_LR027382.1 | Alistipes megaguti |
| 354 | 1250194 | 1250310 | - | NZ_AP019735.1 | Alistipes communis |
| 355 | 1793744 | 1793860 | + | NZ_AP019736.1 | Alistipes dispar |
| 356 | 1824813 | 1824935 | - | NZ_CP009215.1 | Corynebacterium ureicelerivorans |
| 357 | 3619000 | 3619116 | - | NZ_AP014545.1 | Amphritea japonica ATCC BAA-1530 |
| 358 | 1934856 | 1934972 | + | NC_018011.1 | Alistipes finegoldii DSM 17242 |
| 359 | 1181805 | 1181927 | + | NZ_CP015449.1 | Dietzia lutea |
| 360 | 571207 | 571335 | + | NC_007354.1 | Ehrlichia canis str. Jake |
| 361 | 524200 | 524328 | + | NC_023063.1 | Ehrlichia muris AS145 |
| 362 | 460170 | 460286 | + | NZ_LR215048.1 | Acholeplasma axanthum |
| 363 | 65392 | 65508 | - | NZ_CP024727.1 | Prevotella intermedia |
| 364 | 680600 | 680722 | - | NZ_CP053642.1 | Actinomyces marmotae |
| 365 | 540230 | 540358 | + | NC_012026.1 | Anaplasma marginale str. Florida |
| 366 | 512036 | 512164 | + | NZ_CP015994.1 | Anaplasma ovis str. Haibei |
| 367 | 1821849 | 1821971 | - | NZ_CP014228.1 | Actinomyces radicidentis |
| 368 | 2823767 | 2823883 | - | NZ_LR134384.1 | Prevotella oris |
| 369 | 3587084 | 3587200 | - | NC_008255.1 | Cytophaga hutchinsonii ATCC 33406 |
| 370 | 3412586 | 3412711 | + | NZ_CP021112.1 | Pseudorhodoplanes sinuspersici |
| 371 | 663958 | 664086 | - | NZ_CP007480.1 | Ehrlichia chaffeensis str. West Paces |
| 372 | 684901 | 685029 | + | NZ_CP040111.1 | Ehrlichia ruminantium |
| 373 | 2710489 | 2710614 | - | NC_014313.1 | Hyphomicrobium denitrificans ATCC 51888 |
| 374 | 2524797 | 2524913 | - | NC_014033.1 | Prevotella ruminicola 23 |
| 375 | 1255297 | 1255413 | + | NC_007912.1 | Saccharophagus degradans 2-40 |
| 376 | 630384 | 630509 | - | NZ_CP031962.1 | Pseudoalteromonas tunicata |
| 377 | 2770963 | 2771079 | - | NZ_LT906459.1 | Odoribacter splanchnicus |
| 378 | 1852337 | 1852489 | - | NZ_CP036298.1 | Aureliella helgolandensis |
| 379 | 2986271 | 2986396 | + | NC_014008.1 | Coraliomargarita akajimensis DSM 45221 |
| 380 | 7333560 | 7333682 | + | NZ_CP023703.1 | Streptomyces galilaeus |
| 381 | 3895028 | 3895150 | - | NZ_CP041146.1 | Nocardioides humi |
| 382 | 843859 | 843984 | + | NZ_CP012946.1 | Blastochloris viridis |
| 383 | 8740003 | 8740125 | + | NZ_CP034687.1 | Streptomyces griseoviridis |
| 384 | 1129191 | 1129304 | + | NC_014960.1 | Anaerolinea thermophila UNI-1 |
| 385 | 2943241 | 2943354 | - | NC_014212.1 | Meiothermus silvanus DSM 9946 |
| 386 | 1391048 | 1391161 | + | NZ_CP018477.1 | Thermogutta terrifontis |
| 387 | 604835 | 604951 | + | NZ_CP014864.1 | Microbulbifer thermotolerans |
| 388 | 2891276 | 2891389 | - | NZ_AP018437.1 | Pelolinea submarina |
| 389 | 264239 | 264355 | + | NZ_CP060084.1 | Teredinibacter haidensis |
| 390 | 3645313 | 3645429 | - | NZ_CP019791.1 | Anaerohalosphaera lusitana |
| 391 | 4846808 | 4846924 | - | NZ_CP011807.3 | Pandoraea faecigallinarum |
| 392 | 5008820 | 5008936 | - | NC_023018.2 | Pandoraea pnomenusa |
| 393 | 366972 | 367088 | + | NZ_CP013481.2 | Pandoraea apista |
| 394 | 1159547 | 1159663 | + | NZ_CP047385.1 | Pandoraea fibrosis |
| 395 | 5243818 | 5243934 | - | NZ_CP010897.2 | Pandoraea vervacti |
| 396 | 5365256 | 5365372 | - | NZ_LT906435.1 | Pandoraea sputorum |
| 397 | 5482940 | 5483056 | - | NZ_CP010310.2 | Pandoraea pulmonicola |
| 398 | 192004 | 192117 | + | NC_014378.1 | Acetohalobium arabaticum DSM 5501 |
| 399 | 209779 | 209892 | + | NC_019978.1 | Halobacteroides halobius DSM 5150 |
| 400 | 1583188 | 1583304 | + | NZ_CP014143.1 | Microbulbifer aggregans |
| 401 | 3436635 | 3436751 | - | NZ_CP047491.1 | Microbulbifer hydrolyticus |
| 402 | 3507887 | 3508003 | - | NZ_CP019650.1 | Microbulbifer agarilyticus |
| 403 | 4407622 | 4407738 | - | NZ_CP060092.1 | Teredinibacter purpureus |
| 404 | 366918 | 367058 | + | NZ_CP019706.1 | Pantoea alhagi |
| 405 | 1633961 | 1634074 | - | NC_014761.1 | Oceanithermus profundus DSM 14977 |
| 406 | 1579136 | 1579249 | - | NC_006461.1 | Thermus thermophilus HB8 |
| 407 | 421012 | 421125 | + | NZ_CP014141.1 | Thermus parvatiensis |
| 408 | 3094951 | 3095067 | - | NZ_CP019646.1 | Limihaloglobus sulfuriphilus |
| 409 | 1713713 | 1713826 | - | NC_015387.1 | Marinithermus hydrothermalis DSM 14884 |
| 410 | 2145552 | 2145668 | - | NZ_CP012047.1 | Tetragenococcus halophilus |
| 411 | 269813 | 269926 | + | NC_019386.1 | Thermus oshimai JL-2 |
| 412 | 500703 | 500816 | - | NC_017079.1 | Caldilinea aerophila DSM 14535 = NBRC 104270 |
| 413 | 4489551 | 4489664 | - | NC_016627.1 | Acetivibrio clariflavus DSM 19732 |
| 414 | 1442082 | 1442198 | - | NC_022538.1 | Acholeplasma palmae J233 |
| 415 | 1674685 | 1674798 | + | NZ_CP049889.1 | Jeotgalibaca porci |
| 416 | 515406 | 515519 | + | NZ_CP016502.1 | Acetivibrio thermocellus DSM 2360 |
| 417 | 3361384 | 3361497 | - | NZ_CP025197.1 | Acetivibrio saccincola |
| 418 | 331281 | 331394 | + | NZ_CP010822.1 | Thermus aquaticus Y51MC23 |
| 419 | 535387 | 535509 | - | NZ_CP022295.1 | Nocardioides aromaticivorans |
| 420 | 1085436 | 1085549 | - | NC_017096.1 | Caldisericum exile AZM16c01 |
| 421 | 1554534 | 1554647 | - | NZ_CP038452.1 | Thermus caldilimi |
| 422 | 345388 | 345501 | + | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 423 | 1622291 | 1622416 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
| 424 | 3907248 | 3907364 | + | NZ_CP022203.1 | Corallococcus macrosporus DSM 14697 |
| 425 | 4589128 | 4589244 | - | NZ_CP012109.1 | Myxococcus hansupus |
| 426 | 5955343 | 5955459 | - | NC_020126.1 | Myxococcus stipitatus DSM 14675 |
| 427 | 1028936 | 1029049 | - | NZ_CP008796.1 | Thermodesulfobacterium commune DSM 2178 |
| 428 | 278571 | 278684 | - | NC_022575.1 | Mycoplasma parvum str. Indiana |
| 429 | 328605 | 328718 | + | NC_015153.1 | Mycoplasma suis KI3806 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP006828.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00828.21 | 0.63 | 268 | 1853.0 | same-strand | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A |
| 2 | PF00344.22 | 0.64 | 274 | 502.0 | same-strand | SecY |
| 3 | PF01176.21 | 0.62 | 264 | 18.0 | same-strand | Translation initiation factor 1A / IF-1 |
| 4 | PF00416.24 | 0.61 | 260 | 15.0 | same-strand | Ribosomal protein S13/S18 |
| 5 | PF00411.21 | 0.67 | 287 | 426 | same-strand | Ribosomal protein S11 |
| 6 | PF00163.21 | 0.64 | 272 | 907.0 | same-strand | Ribosomal protein S4/S9 N-terminal domain |
| 7 | PF01479.27 | 0.64 | 272 | 907.0 | same-strand | S4 domain |
| 8 | PF03118.17 | 0.67 | 286 | 1551.0 | same-strand | Bacterial RNA polymerase, alpha chain C terminal domain |
| 9 | PF01193.26 | 0.68 | 289 | 1550 | same-strand | RNA polymerase Rpb3/Rpb11 dimerisation domain |
| 10 | PF01000.28 | 0.68 | 289 | 1550 | same-strand | RNA polymerase Rpb3/RpoA insert domain |
| 11 | PF01196.21 | 0.66 | 284 | 2572.0 | same-strand | Ribosomal protein L17 |
++ More..