ProsmORF-pred
Result : Q5F9I5
Protein Information
Information Type Description
Protein name ATP-dependent Clp protease adapter protein ClpS
NCBI Accession ID AE004969.1
Organism Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
Left 406140
Right 406442
Strand -
Nucleotide Sequence ATGACCGCGCAACACCAATCCGACACGCTTTTGCACCGCCTGAACACCCTGCCGCCGAAACGTTACGGCGTATTTTTATTGAACGACGATTACACCACGATGGAATTTGTCGTTGAAATCCTGACCGAAATCTTTATGCTCGGGCAGGAACAGGCGGTAGCGGTAATGCTCTCGGTTCATCACGAAGGCAAAGGCCTGTGCGGCACTTACACGCGCGATATCGCCCAAACCAAACAGCAACAAGTCATGCAGCGGGCAAAAGCCGAAGGACATCCGCTGCAATGTATTGTCGAGGAGATTTAA
Sequence MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEIFMLGQEQAVAVMLSVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI
Source of smORF Swiss-Prot
Function Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation. {ECO:0000255|HAMAP-Rule:MF_00302}.
Pubmed ID
Domain CDD:412656
Functional Category Others
Uniprot ID Q5F9I5
ORF Length (Amino Acid) 100
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 502
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 1726863 1727165 - NZ_CP012028.1 Neisseria gonorrhoeae
2 483943 484245 - NZ_CP021520.1 Neisseria meningitidis
3 539240 539542 - NZ_CP031253.1 Neisseria lactamica
4 1788095 1788397 - NZ_CP031325.1 Neisseria polysaccharea
5 452431 452742 - NZ_CP072524.1 Neisseria sicca
6 452470 452772 - NZ_LS483369.1 Neisseria cinerea
7 473185 473496 - NZ_CP039886.1 Neisseria flavescens
8 521765 522076 - NZ_CP039887.1 Neisseria subflava
9 2087651 2087965 + NZ_CP022278.1 Neisseria chenwenguii
10 70893 71204 - NZ_CP046027.1 Neisseria brasiliensis
11 1502887 1503198 + NZ_CP031699.1 Neisseria animalis
12 2071057 2071371 + NZ_LT906434.1 Neisseria zoodegmatis
13 2882472 2882735 - NZ_CP060414.1 Neisseria musculi
14 718347 718658 + NZ_LR134516.1 Neisseria animaloris
15 1610627 1610941 + NZ_CP031700.1 Neisseria zalophi
16 1946164 1946478 + NZ_CP059565.1 Neisseria wadsworthii
17 2057922 2058179 + NZ_LR134533.1 Neisseria weaveri
18 1714642 1714956 + NZ_LR134313.1 Neisseria canis
19 2073057 2073362 + NZ_CP031252.1 Neisseria elongata
20 1665059 1665364 + NZ_CP059571.1 Neisseria bacilliformis
21 894924 895226 + NZ_CP059564.1 Alysiella filiformis
22 42417 42719 + NZ_CP059563.1 Conchiformibius steedae
23 1905346 1905651 - NZ_CP059569.1 Kingella oralis
24 1491060 1491371 + NZ_CP059567.1 Neisseria shayeganii
25 1991076 1991348 + NZ_LT906482.1 Eikenella corrodens
26 188805 189107 + NZ_CP019448.1 Simonsiella muelleri ATCC 29453
27 864997 865254 + NZ_CP038018.1 Eikenella exigua
28 1149330 1149641 - NZ_AP018721.1 Sulfuritortus calidifontis
29 949011 949313 - NC_013959.1 Sideroxydans lithotrophicus ES-1
30 971692 971946 + NZ_CP007446.1 Snodgrassella alvi wkB2
31 715805 716113 + NZ_CP058952.1 Chitinibacter fontanus
32 444803 445111 + NZ_CP039731.1 Aquitalea aquatilis
33 512769 513077 - NZ_CP047241.1 Aquitalea denitrificans
34 6744765 6745067 + NZ_CP040017.1 Massilia umbonata
35 4988240 4988542 - NZ_CP036401.1 Massilia albidiflava
36 5597175 5597477 + NZ_CP046904.1 Massilia flava
37 2280905 2281207 + NZ_CP028324.1 Massilia armeniaca
38 2253018 2253260 + NZ_CP016172.1 Bordetella flabilis
39 4272518 4272820 - NZ_HG322949.1 Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628
40 822447 822707 + NZ_AP014568.1 Serpentinomonas raichei
41 2241750 2241992 - NC_010645.1 Bordetella avium 197N
42 1973087 1973389 + NZ_CP023422.1 Janthinobacterium svalbardensis
43 5746387 5746689 + NZ_CP041185.1 Janthinobacterium tructae
44 1744562 1744843 + NZ_CP016440.1 Bordetella pseudohinzii
45 1900627 1900929 + NZ_CP048832.1 Janthinobacterium lividum
46 2582544 2582828 - NZ_CP043146.1 Bordetella holmesii
47 3511553 3511834 + NZ_CP021395.1 Bordetella hinzii
48 5886335 5886637 + NZ_CP019038.1 Massilia putida
49 2431794 2432036 - NZ_CP046913.1 Paraburkholderia acidisoli
50 298605 298931 - NZ_CP068286.1 Ralstonia syzygii subsp. celebesensis
51 951995 952321 - NZ_CP011257.1 Ralstonia mannitolilytica
52 1076574 1076900 - NZ_CP012943.1 Ralstonia solanacearum
53 2794316 2794642 - NZ_CP016022.1 Ralstonia insidiosa
54 1814019 1814267 + NZ_CP003915.1 Advenella mimigardefordensis DPN7
55 1794004 1794264 - NZ_CP031124.1 Ephemeroptericola cinctiostellae
56 1110563 1110874 - NZ_CP041335.1 Chitinolyticbacter meiyuanensis
57 2592603 2592851 - NC_017964.1 Advenella kashmirensis WT001
58 1705205 1705510 - NZ_AP021888.1 Thiosulfativibrio zosterae
59 2794433 2794675 - NC_010170.1 Bordetella petrii
60 3914202 3914444 - NZ_CP017754.1 Cupriavidus malaysiensis
61 3230320 3230562 - NZ_CP024941.1 Paraburkholderia terricola
62 2448139 2448381 - NZ_CP046909.1 Paraburkholderia acidiphila
63 4082931 4083239 + NZ_CP034464.1 Undibacterium parvum
64 2424609 2424917 + NC_014394.1 Gallionella capsiferriformans ES-2
65 2499085 2499327 - NZ_CP049134.1 Paraburkholderia tropica
66 877142 877384 + NC_007651.1 Burkholderia thailandensis E264
67 801248 801490 - NZ_CP009555.1 Burkholderia oklahomensis C6786
68 3477416 3477658 - NZ_CP002580.1 Burkholderia plantarii
69 614375 614635 + NZ_AP014569.1 Serpentinomonas mccroryi
70 1981724 1981966 + NZ_CP017707.1 Chromobacterium vaccinii
71 1283153 1283461 + NZ_CP013236.1 Collimonas pratensis
72 1600179 1600421 - NZ_CP035900.1 Burkholderia glumae
73 2733844 2734086 + NZ_CP043473.1 Chromobacterium paludis
74 1137898 1138206 + NZ_CP013235.1 Collimonas arenae
75 3969550 3969792 + NC_005085.1 Chromobacterium violaceum ATCC 12472
76 685215 685457 + NZ_CP029495.1 Chromobacterium phragmitis
77 612975 613217 + NZ_CP009795.1 Burkholderia dolosa AU0158
78 2836647 2836889 - NZ_CP009832.1 Burkholderia multivorans ATCC BAA-247
79 2799357 2799599 - NZ_CP013398.1 Burkholderia seminalis
80 2869450 2869692 - NZ_CP013401.1 Burkholderia metallica
81 566531 566773 - NZ_CP011503.1 Burkholderia pyrrocinia
82 2872899 2873141 - NZ_CP013450.1 Burkholderia cenocepacia
83 2941661 2941903 - NZ_CP045235.1 Burkholderia cepacia
84 2968352 2968594 - NC_007510.1 Burkholderia lata
85 3013734 3013976 - NZ_CP013459.1 Burkholderia stagnalis
86 2964197 2964439 - NZ_CP020737.1 Paraburkholderia acidophila
87 3182094 3182336 - NZ_CP013414.1 Burkholderia ubonensis
88 4269970 4270278 - NZ_CP013232.1 Collimonas fungivorans
89 3487120 3487362 + NZ_CP066075.1 Paraburkholderia ginsengisoli
90 3198881 3199123 - NZ_CP024934.1 Paraburkholderia graminis
91 1989351 1989593 + NZ_CP022989.1 Paraburkholderia aromaticivorans
92 1319480 1319722 - NZ_CP031467.1 Paraburkholderia caffeinilytica
93 3996130 3996372 - NC_007951.1 Paraburkholderia xenovorans LB400
94 775279 775587 + NZ_AP018738.1 Ferriphaselus amnicola
95 1956171 1956416 + NZ_CP051298.1 Alicycliphilus denitrificans
96 31139 31381 + NZ_CP017561.1 Paraburkholderia sprentiae WSM5005
97 3567453 3567761 + NZ_LT671418.1 Herminiimonas arsenitoxidans
98 2357777 2358019 - NZ_CP029640.1 Paraburkholderia dokdonella
99 3567171 3567413 - NC_010681.1 Paraburkholderia phytofirmans PsJN
100 779547 779798 + NZ_CP022987.1 Pusillimonas thiosulfatoxidans
101 748910 749152 + NC_010554.1 Proteus mirabilis HI4320
102 665016 665258 + NZ_CP026111.1 Paraburkholderia terrae
103 1328582 1328824 - NZ_CP015958.1 Paraburkholderia caribensis
104 2313403 2313669 + NZ_CP060714.1 Diaphorobacter ruginosibacter
105 1232709 1232951 + NZ_CP009727.1 Burkholderia mallei
106 798834 799076 - NZ_CP008781.1 Burkholderia pseudomallei
107 3727609 3727851 - NZ_CP016171.1 Bordetella bronchialis
108 643572 643814 + NC_010622.1 Paraburkholderia phymatum STM815
109 2825405 2825650 - NZ_CP017476.1 Hydrogenophaga crassostreae
110 2622866 2623108 - NZ_CP054626.1 Cupriavidus gilardii
111 2625927 2626169 - NC_008825.1 Methylibium petroleiphilum PM1
112 1629722 1630021 + NZ_CP041406.1 Sulfurimonas paralvinellae
113 1241144 1241452 + NZ_AP022853.1 Sulfurimicrobium lacus
114 3715563 3715805 - NZ_CP062803.1 Cupriavidus basilensis
115 3024853 3025095 - NZ_CP032519.1 Cupriavidus oxalaticus
116 3307169 3307411 - NZ_CP039287.1 Cupriavidus necator H16
117 1933579 1933824 + NZ_CP021359.1 Acidovorax carolinensis
118 4087792 4088034 - NZ_CP011807.3 Pandoraea faecigallinarum
119 4212498 4212740 - NC_023018.2 Pandoraea pnomenusa
120 1274897 1275139 + NZ_CP013481.2 Pandoraea apista
121 1934676 1934918 + NZ_CP047385.1 Pandoraea fibrosis
122 4431077 4431319 - NZ_CP011253.3 Pandoraea oxalativorans
123 4462072 4462314 - NZ_CP010897.2 Pandoraea vervacti
124 4551148 4551390 - NZ_LT906435.1 Pandoraea sputorum
125 4687909 4688151 - NZ_CP010310.2 Pandoraea pulmonicola
126 4997770 4998012 - NZ_CP013480.3 Pandoraea norimbergensis
127 755257 755502 - NZ_CP012362.1 Oblitimonas alkaliphila
128 254736 254978 - NZ_CP037953.1 Permianibacter aggregans
129 2839681 2839923 + NZ_CP026364.1 Proteus hauseri
130 1378694 1378942 - NZ_CP028901.1 Algicoccus marinus
131 2813360 2813605 - NZ_CP037867.1 Hydrogenophaga pseudoflava
132 1554112 1554411 - NZ_AP022826.1 Nitrosophilus labii
133 426943 427242 - NZ_LN907858.1 Helicobacter typhlonius
134 2075055 2075297 + NZ_AP019378.1 Bordetella parapertussis
135 1801799 1802041 + NZ_LR134326.1 Bordetella bronchiseptica
136 513613 513855 + NC_014722.1 Mycetohabitans rhizoxinica HKI 454
137 2487959 2488210 - NZ_HG916765.1 Castellaniella defragrans 65Phen
138 708106 708348 + NC_018518.1 Bordetella pertussis 18323
139 2053170 2053415 + NC_008781.1 Polaromonas naphthalenivorans CJ2
140 375864 376166 - NZ_AP018558.1 Hydrogenophilus thermoluteolus
141 2284947 2285204 - NZ_CP032101.1 Malaciobacter marinus
142 2238248 2238505 - NZ_CP042812.1 Malaciobacter canalis
143 1458499 1458741 + NC_008260.1 Alcanivorax borkumensis SK2
144 2730765 2731034 - NZ_CP040709.1 Inhella inkyongensis
145 893448 893693 + NZ_CP016278.1 Diaphorobacter polyhydroxybutyrativorans
146 3843525 3843767 - NZ_CP043046.1 Pigmentiphaga aceris
147 5277098 5277343 + NZ_CP047650.1 Xylophilus rhododendri
148 1623189 1623434 - NZ_CP044483.1 Acinetobacter schindleri
149 695424 695666 - NC_018868.3 Simiduia agarivorans SA1 = DSM 21679
150 1216302 1216619 + NZ_CP054020.1 Thiomicrorhabdus xiamenensis
151 2243955 2244200 + NC_015138.1 Acidovorax avenae subsp. avenae ATCC 19860
152 2029831 2030079 - NZ_CP051461.1 Polaromonas vacuolata
153 598364 598606 + NC_021287.1 Caballeronia insecticola
154 710841 711137 + NZ_CP007030.1 Thiomicrospira aerophila AL3
155 564356 564598 + NZ_CP011568.3 Pandoraea thiooxydans
156 3270857 3271102 + NZ_CP027669.1 Simplicispira suum
157 1515624 1515869 + NZ_CP049916.1 Acinetobacter lanii
158 1835779 1836024 + NZ_CP027792.1 Pulveribacter suum
159 2134101 2134343 - NZ_CP018845.1 Herbaspirillum robiniae
160 2310330 2310575 - NC_015677.1 Ramlibacter tataouinensis TTB310
161 4070654 4070899 - NZ_CP020038.1 Agarilytica rhodophyticola
162 3917630 3917878 - NZ_CP019343.1 Oceanicoccus sagamiensis
163 1970042 1970287 - NZ_CP035934.2 Acinetobacter cumulans
164 583951 584238 + NZ_LR778301.1 Denitratisoma oestradiolicum
165 1611445 1611690 + NZ_CP032134.1 Acinetobacter chinensis
166 1114348 1114590 - NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H
167 398805 399107 - NC_014212.1 Meiothermus silvanus DSM 9946
168 933582 933923 + NZ_CP031222.1 Aquirhabdus parva
169 2179525 2179767 - NC_008576.1 Magnetococcus marinus MC-1
170 1330419 1330664 + NZ_CP045650.1 Acinetobacter wanghuae
171 1702463 1702708 - NZ_CP029397.2 Acinetobacter defluvii
172 2237289 2237546 - NZ_CP064338.1 Schlegelella thermodepolymerans
173 4958208 4958453 - NC_008786.1 Verminephrobacter eiseniae EF01-2
174 2366298 2366540 + NC_012969.1 Methylovorus glucosetrophus SIP3-4
175 1944246 1944527 - NZ_CP049801.1 Acinetobacter shaoyimingii
176 3633970 3634278 + NZ_CP064781.1 Azospira restricta
177 2118470 2118712 + NC_012968.1 Methylotenera mobilis JLW8
178 1670934 1671230 - NC_018002.1 Sulfurospirillum barnesii SES-3
179 3676924 3677175 + NZ_CP013119.1 Alcaligenes faecalis
180 2172367 2172624 - NZ_CP031218.1 Malaciobacter halophilus
181 1572709 1572951 - NC_013166.1 Kangiella koreensis DSM 16069
182 554812 555120 - NZ_CP013341.1 Nitrosomonas ureae
183 3583493 3583735 - NZ_CP060092.1 Teredinibacter purpureus
184 3572614 3572859 - NC_008752.1 Acidovorax citrulli AAC00-1
185 3203231 3203473 + NZ_CP024645.1 Rhizobacter gummiphilus
186 446202 446501 + NZ_CP036246.2 [Arcobacter] porcinus
187 1732469 1732768 + NC_014506.1 Sulfurimonas autotrophica DSM 16294
188 1801615 1801914 - NC_017187.1 Aliarcobacter butzleri ED-1
189 1900039 1900281 - NC_017310.1 Desulfovibrio vulgaris RCH1
190 4266107 4266352 - NZ_CP014158.1 Pseudomonas citronellolis
191 1469821 1470120 - NZ_AP022847.1 Nitrosophilus alvini
192 1978035 1978277 + NZ_CP022423.1 Vitreoscilla filiformis
193 3128468 3128746 - NC_022997.1 Hyphomicrobium nitrativorans NL23
194 1473217 1473459 - NZ_CP025120.1 Kangiella profundi
195 2546152 2546394 - NC_012691.1 Tolumonas auensis DSM 9187
196 3504368 3504676 + NZ_CP018839.1 Thauera chlorobenzoica
197 1249930 1250187 + NZ_CP035708.1 Sphaerotilus natans subsp. sulfidivorans
198 1261929 1262225 - NC_015581.1 Thiomicrospira cyclica ALM1
199 2048343 2048642 - NZ_CP030944.1 Arcobacter aquimarinus
200 2219290 2219532 + NZ_CP013910.1 Deinococcus actinosclerus
201 1306363 1306644 + NZ_CP035033.1 Hydrogenovibrio thermophilus
202 861755 861997 + NZ_CP011389.1 Deinococcus soli (ex Cha et al. 2016)
203 2781820 2782062 - NZ_CP015839.1 Marinobacterium aestuarii
204 2541068 2541310 - NZ_CP024199.1 Thalassospira marina
205 2512331 2512576 + NZ_CP048878.1 Spartinivicinus ruber
206 3207504 3207746 + NZ_CP020046.1 Thiomonas intermedia
207 2887444 2887689 + NZ_CP019236.1 Rhodoferax koreense
208 2276198 2276443 - NZ_CP035503.1 Rhodoferax sediminis
209 530107 530349 - NC_007947.1 Methylobacillus flagellatus KT
210 1600505 1600786 + NZ_CP024632.1 Acinetobacter junii
211 2162724 2162969 + NZ_AP014630.1 Acinetobacter guillouiae
212 1889432 1889674 - NZ_CP031415.1 Saccharospirillum mangrovi
213 2487220 2487465 + NZ_CP049044.1 Pseudomonas psychrophila
214 1776437 1776682 + NC_014259.1 Acinetobacter oleivorans DR1
215 2098375 2098620 - NZ_CP054840.1 Acidovorax antarcticus
216 1876156 1876404 + NZ_CP014544.1 Zhongshania aliphaticivorans
217 3081540 3081782 + NZ_CP041730.1 Chitinimonas arctica
218 406047 406346 + NZ_CP053837.1 Aliarcobacter faecis
219 2588929 2589171 - NZ_CP004388.1 Thalassospira xiamenensis M-5 = DSM 17429
220 1659235 1659480 + NZ_CP015121.1 Acinetobacter baumannii
221 2460151 2460396 - NZ_LR215729.2 Pseudomonas marincola
222 1022163 1022453 + NZ_CP041970.1 Acinetobacter dispersus
223 1238796 1239038 + NZ_CP047349.1 Proteus terrae subsp. cibarius
224 375102 375347 + NZ_CP011308.1 Sulfurovum lithotrophicum
225 1104094 1104342 + NZ_CP012418.1 Kangiella sediminilitoris
226 5580284 5580568 - NZ_CP018632.1 Granulosicoccus antarcticus IMCC3135
227 300184 300483 + NZ_CP032823.1 Aliarcobacter cryaerophilus ATCC 43158
228 769766 770011 + NZ_CP060790.1 Acidovorax monticola
229 1467112 1467393 + NZ_CP029210.1 Aquabacterium olei
230 1870853 1871152 + NZ_AP023212.1 Hydrogenimonas urashimensis
231 332950 333255 + NC_005090.1 Wolinella succinogenes DSM 1740
232 1129947 1130189 + NC_011753.2 Vibrio atlanticus
233 1721202 1721510 + NZ_CP011025.1 Pseudoalteromonas arctica A 37-1-2
234 3497669 3497977 + NZ_CP019628.1 Pseudoalteromonas aliena
235 2467719 2468027 + NZ_CP028339.1 Thauera aromatica K172
236 860472 860765 - NZ_CP021886.1 Helicobacter apodemus
237 3098340 3098597 + NZ_CP072425.1 Pseudoalteromonas viridis
238 1013004 1013249 + NZ_CP012676.1 Pseudomonas versuta
239 1527148 1527444 - NZ_CP051180.1 Ferrimonas lipolytica
240 1812126 1812371 - NZ_CP029822.1 Entomomonas moraniae
241 3968415 3968657 + NZ_CP052766.1 Alteromonas pelagimontana
242 798250 798558 - NC_022357.1 Sulfuricella denitrificans skB26
243 865467 865748 - NZ_LR134374.1 Legionella spiritensis
244 1330886 1331128 - NZ_CP010028.1 Deinococcus radiopugnans
245 3270392 3270637 - NZ_CP020121.1 Comamonas kerstersii
246 1532071 1532358 + NZ_CP019240.1 Rhodoferax antarcticus
247 2568795 2569037 - NZ_AP018150.1 Mycoavidus cysteinexigens
248 1952395 1952715 - NC_011901.1 Thioalkalivibrio sulfidiphilus HL-EbGr7
249 3049436 3049684 - NC_007908.1 Rhodoferax ferrireducens T118
250 2237130 2237411 - NZ_CP016895.1 Acinetobacter larvae
251 2513366 2513611 + NZ_AP022642.1 Pseudomonas otitidis
252 1115107 1115355 + NZ_CP010975.1 Kangiella geojedonensis
253 2356499 2356756 + NZ_CP072268.1 Xanthomonas euvesicatoria pv. alfalfae
254 2164501 2164758 - NZ_CP032098.1 Malaciobacter molluscorum LMG 25693
255 2336560 2336802 - NZ_CP046268.1 Vibrio spartinae
256 1156405 1156647 + NZ_CP060084.1 Teredinibacter haidensis
257 1992046 1992288 + NZ_CP004387.1 Alcanivorax pacificus W11-5
258 3211233 3211478 - NZ_CP043575.1 Comamonas koreensis
259 1037293 1037535 - NC_012526.1 Deinococcus deserti VCD115
260 948323 948574 + NZ_CP012196.1 Campylobacter gracilis
261 1728407 1728697 + NZ_CP030880.1 Acinetobacter haemolyticus
262 1631096 1631395 - NZ_CP031367.1 Aliarcobacter trophiarum LMG 25534
263 2222928 2223185 - NZ_CP031219.1 Malaciobacter mytili LMG 24559
264 1821887 1822129 - NC_009379.1 Polynucleobacter asymbioticus QLW-P1DMWA-1
265 2547116 2547361 - NZ_CP009533.1 Pseudomonas rhizosphaerae
266 1497586 1497831 - NC_004917.1 Helicobacter hepaticus ATCC 51449
267 1855584 1855826 + NC_017059.1 Pararhodospirillum photometricum DSM 122
268 1846649 1846906 - NZ_CP014671.1 Immundisolibacter cernigliae
269 1603627 1603869 + NZ_CP043869.1 Neptunomonas concharum
270 1006421 1006663 + NZ_CP040021.1 Salinivibrio kushneri
271 1695387 1695629 - NZ_CP007501.1 Polynucleobacter duraquae
272 2655085 2655327 + NZ_LT960614.1 Hartmannibacter diazotrophicus
273 2458668 2458931 - NC_014166.1 Arcobacter nitrofigilis DSM 7299
274 2077823 2078068 + NZ_CP056030.1 Pseudomonas eucalypticola
275 2149428 2149727 - NZ_CP053833.1 Arcobacter cloacae
276 1236269 1236511 + NZ_CP053073.1 Usitatibacter palustris
277 1778245 1778490 + NZ_CP062158.2 Pseudomonas lundensis
278 2528404 2528649 + NZ_CP068551.1 Pseudomonas khazarica
279 3613538 3613783 - NZ_CP047698.1 Pseudomonas knackmussii
280 1907030 1907272 - NZ_AP014545.1 Amphritea japonica ATCC BAA-1530
281 1308685 1308927 - NZ_CP030086.1 Polynucleobacter paneuropaeus
282 1661317 1661580 + NZ_AP018676.1 Helicobacter cinaedi
283 2310746 2311003 - NZ_LT853882.1 Xanthomonas fragariae
284 3137635 3137877 - NZ_CP031555.1 Thalassospira indica
285 2151881 2152123 + NC_018691.1 Alcanivorax dieselolei B5
286 1188648 1188890 - NZ_LT615228.1 Polynucleobacter necessarius
287 4206440 4206685 - NZ_CP035088.1 Pseudomonas viciae
288 4231544 4231789 - NZ_CP034725.1 Pseudomonas brassicacearum
289 2661227 2661472 - NZ_CP013124.1 Pseudomonas mendocina S5.2
290 1389979 1390224 - NZ_CP014262.1 Pseudomonas corrugata
291 1040211 1040453 + NC_002163.1 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
292 860784 861044 + NZ_CP017715.1 Marinobacter salinus
293 1785459 1785770 - NZ_AP019755.1 Nitrosomonas stercoris
294 2154761 2155003 + NC_007912.1 Saccharophagus degradans 2-40
295 863276 863533 - NZ_CP014476.1 Methylomonas denitrificans
296 1373499 1373750 - NZ_CP053923.1 Defluviicoccus vanus
297 4423127 4423372 - NZ_CP014870.1 Pseudomonas silesiensis
298 4479593 4479838 - NZ_CP051487.1 Pseudomonas umsongensis
299 2345228 2345473 + NZ_CP070503.1 Pseudomonas atacamensis
300 3931582 3931827 - NZ_CP029608.1 Pseudomonas kribbensis
301 5032644 5032889 - NZ_CP014205.2 Pseudomonas glycinae
302 4119348 4119593 - NZ_CP062253.1 Pseudomonas gozinkensis
303 3188263 3188508 + NZ_CP048833.1 Pseudomonas multiresinivorans
304 4155024 4155269 - NZ_CP062252.1 Pseudomonas allokribbensis
305 1316612 1316857 - NZ_CP005960.1 Pseudomonas mandelii JR-1
306 2149340 2149606 - NZ_LN614830.1 Tatlockia micdadei
307 6579535 6579780 + NZ_CP048810.1 Pseudomonas bijieensis
308 2964607 2964852 - NC_002516.2 Pseudomonas aeruginosa PAO1
309 767190 767432 - NZ_CP010554.1 Rugosibacter aromaticivorans
310 964115 964366 + NZ_LN614827.1 Legionella fallonii LLAP-10
311 2876253 2876498 - NZ_CP060009.1 Pseudomonas sediminis
312 4675626 4675871 + NZ_CP070505.1 Pseudomonas toyotomiensis
313 1208896 1209138 + NZ_AP018685.1 Vibrio rumoiensis
314 3493841 3494083 - NZ_CP041352.1 Casimicrobium huifangae
315 2163060 2163317 + NC_008344.1 Nitrosomonas eutropha C91
316 3695080 3695325 - NZ_CP042804.1 Pseudomonas amygdali pv. tabaci str. ATCC 11528
317 3626953 3627198 - NZ_CP010896.1 Pseudomonas simiae
318 2944666 2944908 - NZ_CP014143.1 Microbulbifer aggregans
319 2384199 2384444 + NZ_CP068034.2 Pseudomonas syringae
320 4428722 4428967 - NZ_LS999205.1 Pseudomonas protegens CHA0
321 1340612 1340857 - NZ_CP031146.1 Pseudomonas plecoglossicida
322 183492 183737 - NZ_CP021323.1 Kushneria konosiri
323 2027523 2027768 + NC_021505.1 Pseudomonas putida NBRC 14164
324 4320721 4320966 - NZ_CP061079.1 Pseudomonas chlororaphis
325 2376897 2377160 - NZ_CP041070.1 Arcobacter anaerophilus
326 3160899 3161144 + NZ_CP021358.1 Kushneria marisflavi
327 3791593 3791838 - NC_004578.1 Pseudomonas syringae pv. tomato str. DC3000
328 739735 739977 - NZ_CP021081.1 Deinococcus ficus
329 1583726 1583983 - NZ_CP072793.1 Thiothrix unzii
330 2068933 2069178 + NZ_CP007039.1 Pseudomonas cichorii JBC1
331 1834243 1834485 - NZ_CP016176.1 Xenorhabdus hominickii
332 3690551 3690796 - NZ_CP054205.1 Pseudomonas rhodesiae
333 4304783 4305028 - NZ_CP018420.1 Pseudomonas veronii
334 3508588 3508833 - NZ_CP027723.1 Pseudomonas orientalis
335 3814304 3814549 - NZ_CP022562.1 Pseudomonas monteilii
336 3670377 3670622 - NZ_CP023272.1 Pseudomonas lurida
337 3902743 3902988 - NZ_CP027756.1 Pseudomonas synxantha
338 4032201 4032446 - NZ_CP012400.2 Pseudomonas yamanorum
339 1595319 1595624 - NC_013223.1 Desulfohalobium retbaense DSM 5692
340 2601912 2602154 + NC_014207.1 Methylotenera versatilis 301
341 2461589 2461831 - NZ_CP031769.1 Salinimonas sediminis
342 2409630 2409875 + NZ_CP067022.1 Pseudomonas cannabina pv. alisalensis
343 1340945 1341187 + NZ_AP014635.1 Vibrio tritonius
344 2195702 2195947 + NZ_CP071706.1 Pseudomonas donghuensis
345 3784923 3785168 - NZ_CP046621.1 Pseudomonas alkylphenolica
346 2235785 2236027 + NZ_CP043929.1 Methylomonas rhizoryzae
347 2590216 2590497 - NZ_CP028127.1 Xanthomonas vasicola pv. vasculorum
348 826280 826537 + NZ_CP016878.1 Xanthomonas hortorum
349 1332374 1332631 + NZ_CP033040.1 Thiomicrorhabdus indica
350 2377117 2377374 + NZ_CP048044.1 Xanthomonas citri
351 685372 685620 - NC_015161.1 Deinococcus proteolyticus MRP
352 10831 11121 + NZ_CP072133.1 Pseudoalteromonas xiamenensis
353 1361208 1361450 + NZ_CP053069.1 Usitatibacter rugosus
354 703093 703392 + NZ_CP054051.1 Aliarcobacter cibarius
355 2319187 2319432 + NC_008027.1 Pseudomonas entomophila L48
356 1539217 1539462 + NZ_CP031093.1 Hydrocarboniclastica marina
357 1458700 1458942 - NZ_AP018689.1 Vibrio aphrogenes
358 2101929 2102186 + NZ_CP007810.1 Xanthomonas oryzae pv. oryzicola
359 2369826 2370071 - NZ_CP011835.1 Azotobacter chroococcum
360 869048 869326 + NZ_CP029556.1 Lysobacter oculi
361 2000156 2000398 + NZ_CP008849.1 Alteromonas australica
362 3621862 3622104 + NZ_CP011104.1 Photorhabdus thracensis
363 119332 119574 + NZ_CP063079.1 Campylobacter peloridis
364 2394040 2394327 - NZ_CP043420.1 Kushneria phosphatilytica
365 1657769 1658011 - NZ_CP023276.1 Polynucleobacter difficilis
366 1921274 1921516 - NZ_CP017415.1 Acidihalobacter yilgarnenesis
367 2105301 2105546 + NZ_CP024159.1 Pseudomonas mosselii
368 1233003 1233248 + NZ_CP009365.1 Pseudomonas soli
369 1754047 1754289 - NZ_CP053015.1 Sphingomonas lacunae
370 140496 140738 - NZ_CP014525.1 Haematospirillum jordaniae
371 3005016 3005261 - NC_010995.1 Cellvibrio japonicus Ueda107
372 1771940 1772197 + NC_010524.1 Leptothrix cholodnii SP-6
373 2592985 2593242 - NZ_CP058243.1 Xanthomonas campestris pv. raphani
374 188484 188726 + NZ_CP046793.1 Vibrio metschnikovii
375 2028929 2029171 + NZ_CP050851.1 Aeromonas hydrophila
376 2914996 2915241 - NC_012560.1 Azotobacter vinelandii DJ
377 2599732 2599974 - NZ_CP041036.1 Shewanella polaris
378 1126796 1127038 + NZ_CP039700.1 Vibrio cyclitrophicus
379 1514521 1514763 - NC_008789.1 Halorhodospira halophila SL1
380 3032763 3033005 + NZ_CP021377.1 Oceanisphaera profunda
381 1597018 1597260 + NZ_CP012946.1 Blastochloris viridis
382 1076814 1077122 + NZ_CP009056.1 Frischella perrara
383 2727999 2728241 - NZ_AP022188.1 Aeromonas media
384 1142546 1142788 - NZ_CP071057.1 Marinicauda algicola
385 1900015 1900257 + NC_005126.1 Photorhabdus laumondii subsp. laumondii TTO1
386 3600264 3600506 - NZ_CP011451.1 Nitrosomonas communis
387 453544 453789 - NZ_CP045302.1 Azotobacter salinestris
388 2719777 2720019 + NZ_CP037952.1 Parashewanella spongiae
389 1631007 1631249 - NZ_CP051883.1 Aeromonas salmonicida
390 2164969 2165214 + NZ_CP042382.1 Pistricoccus aurantiacus
391 1725318 1725563 + NZ_CP046415.1 Guyparkeria halophila
392 664872 665114 - NZ_AP021881.1 Sulfuriferula nivalis
393 1920608 1920850 - NZ_AP012273.1 Thiolapillus brandeum
394 1282532 1282774 + NC_017033.1 Frateuria aurantia DSM 6220
395 994282 994575 + NZ_CP007774.1 Campylobacter volucris LMG 24379
396 3646726 3647007 + NC_020453.1 Bradyrhizobium oligotrophicum S58
397 4504551 4504793 + NZ_CP021112.1 Pseudorhodoplanes sinuspersici
398 2103603 2103863 - NZ_CP019650.1 Microbulbifer agarilyticus
399 1706140 1706388 + NZ_CP011797.1 Reinekea forsetii
400 690489 690746 + NZ_CP014841.1 Dyella thiooxydans
401 3097940 3098185 + NZ_CP023559.1 Salinicola tamaricis
402 304391 304633 - NZ_CP065150.1 Vibrio kanaloae
403 2895865 2896110 + NZ_AP014862.1 Pseudomonas furukawaii
404 3385469 3385750 - NC_015572.1 Methylomonas methanica MC09
405 3392339 3392584 - NC_014364.1 Sediminispirochaeta smaragdinae DSM 11293
406 1141667 1141909 - NZ_CP021376.1 Oceanisphaera avium
407 1017107 1017349 + NC_012039.1 Campylobacter lari RM2100
408 340416 340673 + NZ_CP018725.1 Xanthomonas vesicatoria ATCC 35937
409 1959985 1960227 + NZ_LR134376.1 Aeromonas encheleia
410 1108581 1108823 + NZ_CP053848.1 Campylobacter ornithocola
411 1320793 1321035 + NZ_CP070624.1 Photobacterium damselae subsp. damselae
412 3346004 3346249 - NZ_CP043311.1 Pseudomonas lalkuanensis
413 3183281 3183523 + NC_019793.1 Deinococcus peraridilitoris DSM 19664
414 1196316 1196558 + NC_007626.1 Magnetospirillum magneticum AMB-1
415 1096167 1096472 - NZ_CP063087.1 Helicobacter winghamensis
416 2021837 2022088 - NZ_CP025491.2 Legionella sainthelensi
417 2118715 2118957 + NZ_CP020472.1 Shewanella japonica
418 1711244 1711486 - NZ_CP029347.1 Saliniradius amylolyticus
419 1290476 1290718 + NZ_CP007773.1 Campylobacter subantarcticus LMG 24377
420 3527907 3528149 + NC_016627.1 Acetivibrio clariflavus DSM 19732
421 886916 887158 + NZ_CP045871.1 Litoricola lipolytica
422 461343 461606 - NC_007575.1 Sulfurimonas denitrificans DSM 1251
423 591619 591897 + NC_008783.1 Bartonella bacilliformis KC583
424 768573 768815 + NZ_CP035688.1 Vibrio metoecus
425 1062091 1062333 + NZ_AP014524.1 Vibrio cholerae MS6
426 997850 998092 + NZ_CP012621.1 Zobellella denitrificans
427 828451 828693 - NC_011666.1 Methylocella silvestris BL2
428 1819179 1819436 + NC_009937.1 Azorhizobium caulinodans ORS 571
429 1973610 1973882 + NZ_CP014230.1 Desulfomicrobium orale DSM 12838
430 1122475 1122717 - NZ_CP011412.1 Sedimenticola thiotaurini
431 523698 523940 + NZ_CP044060.1 Aeromonas veronii
432 1581210 1581452 - NZ_CP065745.1 Aeromonas allosaccharophila
433 2673740 2673997 - NZ_CP033326.1 Xanthomonas cucurbitae
434 1614464 1614706 + NZ_CP013107.1 Sinorhizobium americanum
435 1408559 1408801 + NZ_CP029451.1 Sinorhizobium fredii CCBAU 25509
436 2449052 2449294 - NC_017584.1 Rhodospirillum rubrum F11
437 1539532 1539774 + NZ_FO704550.1 Xenorhabdus doucetiae
438 2701136 2701378 - NC_008345.1 Shewanella frigidimarina NCIMB 400
439 1888007 1888249 - NC_010581.1 Beijerinckia indica subsp. indica ATCC 9039
440 2849388 2849633 - NZ_CP014226.1 Halomonas chromatireducens
441 2275534 2275776 + NZ_CP034015.1 Shewanella livingstonensis
442 1970303 1970584 + NZ_CP032694.1 Rhizobium jaguaris
443 77368 77625 - NZ_CP048630.1 Ancylobacter pratisalsi
444 1946897 1947178 - NZ_CP011971.1 Steroidobacter denitrificans
445 2589067 2589312 - NZ_CP021435.1 Halomonas beimenensis
446 3763129 3763371 - NZ_CP019948.1 Methylocystis bryophila
447 1053098 1053340 - NZ_CP022347.1 Campylobacter avium LMG 24591
448 1559685 1559927 + NC_008025.1 Deinococcus geothermalis DSM 11300
449 3232587 3232868 + NZ_CP060711.1 Thermomonas brevis
450 1550645 1550902 + NC_014217.1 Starkeya novella DSM 506
451 3641349 3641630 - NZ_CP010803.1 Martelella endophytica
452 2148805 2149047 + NZ_CP061800.1 Desulfonema magnum
453 4706588 4706896 - NZ_CP059082.1 Halomonas titanicae
454 1054525 1054767 + NZ_CP053825.1 Campylobacter armoricus
455 2423959 2424207 - NC_014532.2 Halomonas elongata DSM 2581
456 1282520 1282762 + NZ_CP023067.1 Ensifer sojae CCBAU 05684
457 1833365 1833610 - NZ_CP021255.1 Desulfobulbus oralis
458 1224196 1224438 + NZ_CP034909.1 Ensifer alkalisoli
459 2970199 2970456 - NC_016112.1 Methylotuvimicrobium alcaliphilum 20Z
460 2536175 2536432 + NC_013851.1 Allochromatium vinosum DSM 180
461 2064198 2064440 + NC_010334.1 Shewanella halifaxensis HAW-EB4
462 3084639 3084881 - NC_009901.1 Shewanella pealeana ATCC 700345
463 2819418 2819660 - NZ_CP061205.1 Kordiimonas pumila
464 4150431 4150673 - NZ_CP061799.1 Desulfonema limicola
465 1431098 1431340 + NZ_LS483470.1 Leminorella richardii
466 2602890 2603177 + NZ_CP015963.1 Altererythrobacter ishigakiensis
467 1890589 1890831 + NZ_CP014864.1 Microbulbifer thermotolerans
468 2334627 2334932 - NC_018020.1 Turneriella parva DSM 21527
469 1456168 1456467 - NZ_CP025197.1 Acetivibrio saccincola
470 1304146 1304388 + NZ_CP015880.1 Ensifer adhaerens
471 1923724 1923966 + NC_011566.1 Shewanella piezotolerans WP3
472 1918005 1918289 + NC_002977.6 Methylococcus capsulatus str. Bath
473 1622354 1622596 + NZ_CP046570.1 Xanthomonas albilineans
474 3078121 3078363 - NZ_CP025086.1 Methylovirgula ligni
475 1544271 1544516 + NZ_CP065435.1 Halomonas sp. SS10-MC5
476 3010756 3011013 - NC_009943.1 Desulfococcus oleovorans Hxd3
477 1548654 1548896 - NZ_AP018724.1 Sulfurivermis fontis
478 2520639 2520881 - NZ_LR134531.1 Pragia fontium
479 3856904 3857146 + NZ_CP044331.1 Methylocystis parvus
480 2630057 2630302 + NZ_CP048812.1 Halomonas socia
481 2218966 2219208 + NZ_CP046378.1 Shewanella algae
482 293389 293631 - NZ_CP031611.1 Campylobacter hepaticus
483 1179326 1179589 - NZ_CP010401.1 Bartonella ancashensis
484 2333900 2334178 - NZ_CP045423.1 Microvirga thermotolerans
485 1390279 1390536 + NZ_CP039268.1 Thermochromatium tepidum ATCC 43061
486 4192893 4193135 - NZ_CP046052.1 Methylocystis heyeri
487 1646427 1646669 - NC_013512.1 Sulfurospirillum deleyianum DSM 6946
488 2029119 2029361 - NZ_CP017111.1 Sulfurospirillum halorespirans DSM 13726
489 2182053 2182295 - NZ_CP007201.1 Sulfurospirillum multivorans DSM 12446
490 1153925 1154206 + NZ_CP048602.1 Halomonas piezotolerans
491 2747001 2747246 - NC_007963.1 Chromohalobacter salexigens DSM 3043
492 2780699 2780944 + NZ_CP018139.1 Halomonas aestuarii
493 1706525 1706806 + NC_020059.1 Rhizobium tropici CIAT 899
494 849822 850100 + NC_012846.1 Bartonella grahamii as4aup
495 1326310 1326555 + NZ_CP013106.1 Halomonas huangheensis
496 2156594 2156839 - NC_012982.1 Hirschia baltica ATCC 49814
497 56834 57076 + NC_008554.1 Syntrophobacter fumaroxidans MPOB
498 278264 278506 + NZ_CP036150.1 Oceanispirochaeta crateris
499 4646483 4646734 - NC_015275.1 Cellulosilyticum lentocellum DSM 5427
500 871766 872008 - NZ_CP053849.1 Campylobacter upsaliensis RM3940
501 2206729 2206971 - NC_017098.1 Spirochaeta africana DSM 8902
502 1251321 1251563 - NZ_CP016502.1 Acetivibrio thermocellus DSM 2360
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP012028.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF07724.16 0.99 497 16 same-strand AAA domain (Cdc48 subfamily)
2 PF17871.3 0.98 494 15.0 same-strand AAA lid domain
3 PF00004.31 0.99 498 19 same-strand ATPase family associated with various cellular activities (AAA)
4 PF10431.11 0.99 496 19.0 same-strand C-terminal, D2-small domain, of ClpB protein
5 PF07728.16 0.99 496 19.0 same-strand AAA domain (dynein-related subfamily)
6 PF02861.22 0.96 483 23 same-strand Clp amino terminal domain, pathogenicity island component
++ More..