Result : Q5F632
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Exodeoxyribonuclease 7 small subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII small subunit) (Exonuclease VII small subunit) |
| NCBI Accession ID | AE004969.1 |
| Organism | Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) |
| Left | 1693789 |
| Right | 1694013 |
| Strand | + |
| Nucleotide Sequence | ATGAAGAAAAACACCCCGAAATCGTTTGAAGAGGCCTTGTCGCGCCTTGAATCGCTGACGCAGTCCATGCAGGGCGAAATGCCCTTGGAAGACGCGCTTGCCGCCTATCAGGAAGGCAACGAGCTGGTCAGGTACTGCCAAACCAAGCTGGCCCAAGTCGAACAGAAATTACAGGTTTTGGATGCGGACGGGACGAAGGAGTTGAACCTTGAATCCGACGAATGA |
| Sequence | MKKNTPKSFEEALSRLESLTQSMQGEMPLEDALAAYQEGNELVRYCQTKLAQVEQKLQVLDADGTKELNLESDE |
| Source of smORF | Swiss-Prot |
| Function | Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides. {ECO:0000255|HAMAP-Rule:MF_00337}. |
| Pubmed ID | |
| Domain | CDD:412547 |
| Functional Category | Others |
| Uniprot ID | Q5F632 |
| ORF Length (Amino Acid) | 74 |
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| Conservation Analysis |
No. of Species: 44
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 785405 | 785629 | + | NZ_CP012028.1 | Neisseria gonorrhoeae |
| 2 | 1613137 | 1613361 | + | NZ_CP021520.1 | Neisseria meningitidis |
| 3 | 2121586 | 2121810 | - | NZ_CP031253.1 | Neisseria lactamica |
| 4 | 1539512 | 1539736 | + | NZ_LS483369.1 | Neisseria cinerea |
| 5 | 1107693 | 1107917 | - | NZ_CP031325.1 | Neisseria polysaccharea |
| 6 | 1921620 | 1921847 | - | NZ_CP039887.1 | Neisseria subflava |
| 7 | 1831086 | 1831313 | + | NZ_CP039886.1 | Neisseria flavescens |
| 8 | 1664224 | 1664454 | - | NZ_CP031252.1 | Neisseria elongata |
| 9 | 2218010 | 2218234 | - | NZ_CP072524.1 | Neisseria sicca |
| 10 | 2270848 | 2271078 | + | NZ_CP060414.1 | Neisseria musculi |
| 11 | 606316 | 606498 | - | NZ_LR134313.1 | Neisseria canis |
| 12 | 1241412 | 1241642 | + | NZ_CP022278.1 | Neisseria chenwenguii |
| 13 | 1021249 | 1021476 | - | NZ_CP046027.1 | Neisseria brasiliensis |
| 14 | 313592 | 313822 | - | NZ_LT906434.1 | Neisseria zoodegmatis |
| 15 | 2127869 | 2128099 | - | NZ_LR134516.1 | Neisseria animaloris |
| 16 | 228488 | 228718 | + | NZ_CP031700.1 | Neisseria zalophi |
| 17 | 625515 | 625745 | - | NZ_CP059565.1 | Neisseria wadsworthii |
| 18 | 1165029 | 1165259 | + | NZ_LR134533.1 | Neisseria weaveri |
| 19 | 2301255 | 2301482 | + | NZ_CP059567.1 | Neisseria shayeganii |
| 20 | 957665 | 957895 | - | NZ_CP031699.1 | Neisseria animalis |
| 21 | 672203 | 672430 | - | NZ_LT906482.1 | Eikenella corrodens |
| 22 | 1552673 | 1552900 | - | NZ_CP038018.1 | Eikenella exigua |
| 23 | 2905 | 3129 | + | NZ_CP059571.1 | Neisseria bacilliformis |
| 24 | 2509625 | 2509852 | + | NZ_CP007446.1 | Snodgrassella alvi wkB2 |
| 25 | 2273447 | 2273650 | - | NZ_CP019448.1 | Simonsiella muelleri ATCC 29453 |
| 26 | 2243992 | 2244219 | - | NZ_CP059569.1 | Kingella oralis |
| 27 | 1246740 | 1246967 | - | NZ_CP059564.1 | Alysiella filiformis |
| 28 | 895185 | 895394 | + | NZ_CP016022.1 | Ralstonia insidiosa |
| 29 | 818133 | 818339 | - | NZ_CP012943.1 | Ralstonia solanacearum |
| 30 | 1813380 | 1813586 | + | NZ_CP068285.1 | Ralstonia syzygii subsp. celebesensis |
| 31 | 2952731 | 2952931 | - | NZ_CP039287.1 | Cupriavidus necator H16 |
| 32 | 4310437 | 4310670 | + | NZ_CP029495.1 | Chromobacterium phragmitis |
| 33 | 2912974 | 2913207 | + | NC_005085.1 | Chromobacterium violaceum ATCC 12472 |
| 34 | 903080 | 903313 | + | NZ_CP017707.1 | Chromobacterium vaccinii |
| 35 | 2666565 | 2666774 | - | NZ_CP032519.1 | Cupriavidus oxalaticus |
| 36 | 1231563 | 1231796 | - | NZ_CP043473.1 | Chromobacterium paludis |
| 37 | 2264979 | 2265182 | - | NZ_CP054626.1 | Cupriavidus gilardii |
| 38 | 3606691 | 3606873 | - | NZ_CP017754.1 | Cupriavidus malaysiensis |
| 39 | 3921364 | 3921561 | - | NZ_CP016171.1 | Bordetella bronchialis |
| 40 | 2025565 | 2025795 | + | NZ_CP016172.1 | Bordetella flabilis |
| 41 | 3889623 | 3889811 | - | NZ_CP043046.1 | Pigmentiphaga aceris |
| 42 | 2682636 | 2682821 | - | NZ_CP018839.1 | Thauera chlorobenzoica |
| 43 | 1721436 | 1721672 | + | NZ_LT907988.1 | Orrella dioscoreae |
| 44 | 1535483 | 1535716 | - | NZ_CP017237.1 | Moorella thermoacetica |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP012028.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00348.19 | 1.0 | 44 | -13 | same-strand | Polyprenyl synthetase |
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