Result : Q5E2R0
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | DNA gyrase inhibitor YacG |
| NCBI Accession ID | CP000020.2 |
| Organism | Aliivibrio fischeri (strain ATCC 700601 / ES114) (Vibrio fischeri) |
| Left | 2462244 |
| Right | 2462453 |
| Strand | + |
| Nucleotide Sequence | ATGACAAAACCAACGACAGAGCAACCAACTACAGTTAAATGTCCAACATGTCAGTCTGCTGTTATTTGGAATGCTGAAAGCCCATTTCGTCCATTTTGTAGTAAAAAATGCCAAATGATTGATTTTGGTGAATGGGCTGATGAAGAAAAATCGATTCCGGGGGCTCCCGATATGTCAGACTCTGATGGTTGGTCTGAAGATCAATACTAA |
| Sequence | MTKPTTEQPTTVKCPTCQSAVIWNAESPFRPFCSKKCQMIDFGEWADEEKSIPGAPDMSDSDGWSEDQY |
| Source of smORF | Swiss-Prot |
| Function | Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase. {ECO:0000255|HAMAP-Rule:MF_00649}. |
| Pubmed ID | 15703294 |
| Domain | CDD:412768 |
| Functional Category | Metal-binding |
| Uniprot ID | Q5E2R0 |
| ORF Length (Amino Acid) | 69 |
++ More..
| Conservation Analysis |
No. of Species: 234
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2850904 | 2851113 | + | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 2 | 3235149 | 3235325 | + | NZ_CP040990.1 | Vibrio furnissii |
| 3 | 724976 | 725185 | - | NZ_CP070624.1 | Photobacterium damselae subsp. damselae |
| 4 | 2123806 | 2124006 | + | NZ_AP018689.1 | Vibrio aphrogenes |
| 5 | 2480575 | 2480769 | + | NZ_AP019657.1 | Vibrio ponticus |
| 6 | 387309 | 387491 | - | NZ_CP071325.1 | Photobacterium ganghwense |
| 7 | 103731 | 103907 | - | NZ_CP014035.2 | Vibrio fluvialis |
| 8 | 2463278 | 2463454 | + | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 9 | 399669 | 399863 | - | NZ_AP019651.1 | Vibrio taketomensis |
| 10 | 471775 | 471984 | - | NZ_CP022741.1 | Vibrio qinghaiensis |
| 11 | 2115584 | 2115760 | + | NZ_CP035688.1 | Vibrio metoecus |
| 12 | 261272 | 261481 | - | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 13 | 2319180 | 2319383 | + | NZ_AP018685.1 | Vibrio rumoiensis |
| 14 | 1028150 | 1028359 | - | NC_013456.1 | Vibrio antiquarius |
| 15 | 745358 | 745537 | - | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 16 | 2802073 | 2802267 | + | NZ_CP044069.1 | Vibrio vulnificus |
| 17 | 602370 | 602564 | - | NZ_CP031781.1 | Vibrio parahaemolyticus |
| 18 | 3209982 | 3210176 | + | NZ_CP009467.1 | Vibrio harveyi |
| 19 | 191426 | 191620 | - | NZ_CP016414.1 | Vibrio scophthalmi |
| 20 | 2626742 | 2626939 | + | NZ_CP047475.1 | Vibrio astriarenae |
| 21 | 252706 | 252900 | - | NZ_CP009977.1 | Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 |
| 22 | 393914 | 394108 | - | NZ_CP018312.1 | Vibrio rotiferianus |
| 23 | 434462 | 434656 | - | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 24 | 439009 | 439209 | - | NZ_CP040021.1 | Salinivibrio kushneri |
| 25 | 2434548 | 2434742 | - | NZ_CP019959.1 | Vibrio owensii |
| 26 | 2324576 | 2324755 | - | NZ_CP046793.1 | Vibrio metschnikovii |
| 27 | 579917 | 580111 | - | NZ_CP032093.1 | Vibrio alfacsensis |
| 28 | 2856295 | 2856471 | - | NZ_CP025792.1 | Vibrio jasicida 090810c |
| 29 | 537722 | 537919 | - | NZ_CP039700.1 | Vibrio cyclitrophicus |
| 30 | 2399296 | 2399472 | + | NZ_CP033078.1 | Vibrio zhugei |
| 31 | 2646371 | 2646565 | + | NZ_CP030788.1 | Vibrio campbellii |
| 32 | 2668238 | 2668432 | + | NZ_CP045350.1 | Vibrio aquimaris |
| 33 | 833506 | 833703 | + | NZ_CP014056.2 | Grimontia hollisae |
| 34 | 2009874 | 2010071 | - | NZ_CP065150.1 | Vibrio kanaloae |
| 35 | 4400546 | 4400743 | + | NZ_CP041247.1 | Raoultella electrica |
| 36 | 2952441 | 2952614 | + | NZ_AP014635.1 | Vibrio tritonius |
| 37 | 2613759 | 2613956 | - | NZ_CP026047.1 | Raoultella planticola |
| 38 | 2745301 | 2745498 | + | NC_011753.2 | Vibrio atlanticus |
| 39 | 829232 | 829426 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 40 | 4618346 | 4618543 | + | NZ_CP046672.1 | Raoultella ornithinolytica |
| 41 | 2460444 | 2460638 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 42 | 708605 | 708790 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 43 | 3352619 | 3352819 | + | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 44 | 586107 | 586310 | - | NZ_CP046268.1 | Vibrio spartinae |
| 45 | 4728816 | 4729010 | + | NZ_CP050508.1 | Raoultella terrigena |
| 46 | 3625490 | 3625675 | - | NZ_CP009460.1 | Dickeya fangzhongdai |
| 47 | 4105803 | 4106000 | + | NZ_CP023525.1 | Cedecea neteri |
| 48 | 820983 | 821177 | - | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 49 | 1901562 | 1901747 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 50 | 43285 | 43479 | - | NZ_CP028271.1 | Mixta intestinalis |
| 51 | 528783 | 528980 | - | NZ_CP065534.1 | Lonsdalea populi |
| 52 | 792211 | 792408 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 53 | 812034 | 812234 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 54 | 771890 | 772081 | - | NZ_LR134494.1 | Serratia quinivorans |
| 55 | 5015067 | 5015261 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 56 | 3740854 | 3741048 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 57 | 872308 | 872502 | - | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 58 | 4617026 | 4617220 | + | NZ_CP054254.1 | Klebsiella variicola |
| 59 | 1015894 | 1016091 | - | NZ_LR134531.1 | Pragia fontium |
| 60 | 3957308 | 3957481 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 61 | 2067528 | 2067725 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 62 | 500920 | 501117 | + | NZ_CP023009.1 | Lonsdalea britannica |
| 63 | 4342806 | 4343000 | + | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 64 | 727273 | 727446 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 65 | 4122530 | 4122715 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 66 | 4123357 | 4123551 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 67 | 2955142 | 2955315 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 68 | 4152261 | 4152434 | + | NZ_CP034938.1 | Pectobacterium odoriferum |
| 69 | 3241006 | 3241206 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 70 | 3734907 | 3735104 | + | NZ_AP023184.1 | Buttiauxella agrestis |
| 71 | 3111961 | 3112161 | + | NZ_CP034035.1 | Brenneria rubrifaciens |
| 72 | 4106326 | 4106511 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 73 | 4285153 | 4285332 | + | NZ_CP071320.1 | Serratia ureilytica |
| 74 | 103894 | 104073 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 75 | 780521 | 780712 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 76 | 3076903 | 3077100 | + | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 77 | 3939134 | 3939319 | + | NZ_CP025799.1 | Dickeya zeae |
| 78 | 3374810 | 3375010 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 79 | 840974 | 841180 | - | NZ_CP061511.1 | Mixta calida |
| 80 | 806442 | 806642 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 81 | 458090 | 458308 | + | NZ_CP026364.1 | Proteus hauseri |
| 82 | 604201 | 604392 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 83 | 1756529 | 1756723 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 84 | 2627073 | 2627273 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 85 | 2400207 | 2400401 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 86 | 751683 | 751877 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 87 | 796999 | 797193 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 88 | 735623 | 735802 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 89 | 903097 | 903282 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 90 | 755172 | 755366 | - | NC_015968.1 | Enterobacter soli |
| 91 | 1285391 | 1285576 | + | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 92 | 875006 | 875179 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 93 | 3042515 | 3042709 | + | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 94 | 774525 | 774719 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 95 | 3731552 | 3731725 | + | NZ_CP050150.1 | Hafnia alvei |
| 96 | 2268744 | 2268938 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 97 | 2764196 | 2764390 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 98 | 706841 | 707026 | - | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 99 | 2997466 | 2997678 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
| 100 | 775940 | 776134 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 101 | 4483391 | 4483585 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 102 | 2796942 | 2797139 | + | NZ_CP067057.1 | Rahnella aceris |
| 103 | 3201254 | 3201436 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 104 | 803867 | 804067 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 105 | 3822453 | 3822650 | + | NZ_LR134201.1 | Cedecea lapagei |
| 106 | 862111 | 862290 | - | NZ_LT906479.1 | Serratia ficaria |
| 107 | 743048 | 743245 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 108 | 3865907 | 3866083 | + | NZ_CP035129.1 | Kosakonia cowanii |
| 109 | 1498700 | 1498894 | + | NZ_CP044098.1 | Citrobacter portucalensis |
| 110 | 3557812 | 3558006 | - | NZ_CP033744.1 | Citrobacter freundii |
| 111 | 4197033 | 4197227 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 112 | 3306405 | 3306599 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 113 | 2305981 | 2306172 | - | NZ_CP065640.1 | Serratia rubidaea |
| 114 | 112859 | 113038 | - | NZ_AP014857.1 | Escherichia albertii |
| 115 | 3745086 | 3745262 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 116 | 3703081 | 3703284 | - | NZ_CP009787.1 | Yersinia rohdei |
| 117 | 3482310 | 3482489 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 118 | 3667009 | 3667203 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 119 | 110151 | 110330 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 120 | 111649 | 111828 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 121 | 5236297 | 5236482 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 122 | 116139 | 116318 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 123 | 5161047 | 5161241 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 124 | 971080 | 971280 | + | NZ_CP023706.1 | Edwardsiella tarda |
| 125 | 3743205 | 3743411 | + | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 126 | 825376 | 825573 | - | NZ_LN907827.1 | Erwinia gerundensis |
| 127 | 733899 | 734075 | - | NZ_LR134340.1 | Escherichia marmotae |
| 128 | 2937508 | 2937708 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 129 | 746832 | 747032 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 130 | 2454460 | 2454660 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 131 | 3333122 | 3333307 | + | NZ_CP038853.1 | Pantoea vagans |
| 132 | 2741910 | 2742092 | + | NZ_LS483470.1 | Leminorella richardii |
| 133 | 3394306 | 3394488 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 134 | 3646000 | 3646182 | - | NZ_CP049115.1 | Pantoea stewartii |
| 135 | 3852475 | 3852681 | + | NZ_CP046293.1 | Yersinia intermedia |
| 136 | 3839997 | 3840191 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 137 | 3485812 | 3486009 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 138 | 2566934 | 2567128 | + | NZ_CP038469.1 | Citrobacter tructae |
| 139 | 838942 | 839148 | - | NZ_CP032487.1 | Yersinia hibernica |
| 140 | 3915620 | 3915814 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 141 | 711668 | 711850 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 142 | 887865 | 888068 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 143 | 1858777 | 1858956 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 144 | 3809941 | 3810117 | + | NZ_LT615367.1 | Dickeya aquatica |
| 145 | 2725711 | 2725902 | - | NZ_CP011254.1 | Serratia fonticola |
| 146 | 2471453 | 2471659 | - | NZ_CP007230.1 | Yersinia similis |
| 147 | 3513804 | 3514010 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 148 | 1278463 | 1278660 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 149 | 2060826 | 2061032 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 150 | 850068 | 850274 | - | NZ_CP043727.1 | Yersinia canariae |
| 151 | 2211904 | 2212101 | + | NC_010554.1 | Proteus mirabilis HI4320 |
| 152 | 3868193 | 3868399 | + | NZ_CP011118.1 | Yersinia enterocolitica |
| 153 | 2483007 | 2483183 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 154 | 3102883 | 3103068 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 155 | 2366584 | 2366775 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 156 | 4967125 | 4967319 | + | NZ_CP036175.1 | Klebsiella huaxiensis |
| 157 | 4290797 | 4290994 | + | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 158 | 4911848 | 4912036 | + | NZ_CP071706.1 | Pseudomonas donghuensis |
| 159 | 3506081 | 3506263 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 160 | 5079460 | 5079654 | + | NZ_CP060111.1 | Klebsiella michiganensis |
| 161 | 3371914 | 3372099 | + | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 162 | 3417282 | 3417473 | + | NZ_CP015581.1 | Tatumella citrea |
| 163 | 715901 | 716083 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 164 | 3828025 | 3828225 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 165 | 1150213 | 1150404 | + | NZ_CP021377.1 | Oceanisphaera profunda |
| 166 | 950356 | 950550 | - | NZ_CP046621.1 | Pseudomonas alkylphenolica |
| 167 | 298719 | 298931 | - | NC_014012.1 | Shewanella violacea DSS12 |
| 168 | 937781 | 937978 | - | NZ_CP067022.1 | Pseudomonas cannabina pv. alisalensis |
| 169 | 5059805 | 5060014 | + | NZ_CP007039.1 | Pseudomonas cichorii JBC1 |
| 170 | 463806 | 464000 | - | NC_006512.1 | Idiomarina loihiensis L2TR |
| 171 | 1039602 | 1039799 | - | NZ_CP068034.2 | Pseudomonas syringae |
| 172 | 904366 | 904563 | - | NZ_CP042804.1 | Pseudomonas amygdali pv. tabaci str. ATCC 11528 |
| 173 | 47640 | 47816 | + | NZ_CP072524.1 | Neisseria sicca |
| 174 | 660865 | 661050 | - | NZ_CP046027.1 | Neisseria brasiliensis |
| 175 | 1451692 | 1451883 | - | NZ_CP049044.1 | Pseudomonas psychrophila |
| 176 | 116166 | 116357 | - | NZ_CP012676.1 | Pseudomonas versuta |
| 177 | 880506 | 880700 | - | NC_014306.1 | Erwinia billingiae Eb661 |
| 178 | 3838625 | 3838837 | + | NZ_CP022272.1 | Shewanella marisflavi |
| 179 | 4110796 | 4110969 | + | NC_009092.1 | Shewanella loihica PV-4 |
| 180 | 675255 | 675443 | - | NZ_CP012400.2 | Pseudomonas yamanorum |
| 181 | 1615722 | 1615910 | + | NZ_CP045302.1 | Azotobacter salinestris |
| 182 | 716523 | 716714 | + | NZ_LR134510.1 | Actinobacillus delphinicola |
| 183 | 6065484 | 6065657 | + | NZ_CP014782.1 | Shewanella psychrophila |
| 184 | 512773 | 512973 | - | NC_009831.1 | Shewanella sediminis HAW-EB3 |
| 185 | 1002367 | 1002564 | - | NC_004578.1 | Pseudomonas syringae pv. tomato str. DC3000 |
| 186 | 804111 | 804299 | - | NZ_CP022562.1 | Pseudomonas monteilii |
| 187 | 2008688 | 2008858 | - | NZ_LR134167.1 | Avibacterium volantium |
| 188 | 5517423 | 5517626 | + | NZ_CP056030.1 | Pseudomonas eucalypticola |
| 189 | 438057 | 438230 | - | NZ_CP028897.1 | Dongshaea marina |
| 190 | 501446 | 501658 | - | NZ_CP009056.1 | Frischella perrara |
| 191 | 369377 | 369550 | - | NC_010506.1 | Shewanella woodyi ATCC 51908 |
| 192 | 87667 | 87852 | + | NZ_LT906463.1 | Haemophilus pittmaniae |
| 193 | 1092525 | 1092713 | - | NZ_CP054205.1 | Pseudomonas rhodesiae |
| 194 | 5923602 | 5923802 | + | NZ_CP051487.1 | Pseudomonas umsongensis |
| 195 | 4851971 | 4852159 | + | NZ_CP024159.1 | Pseudomonas mosselii |
| 196 | 4875833 | 4876033 | - | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 197 | 3997060 | 3997254 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 198 | 917897 | 918079 | - | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 199 | 855095 | 855286 | - | NZ_CP062158.2 | Pseudomonas lundensis |
| 200 | 767040 | 767240 | - | NZ_CP014870.1 | Pseudomonas silesiensis |
| 201 | 4971441 | 4971629 | + | NC_008027.1 | Pseudomonas entomophila L48 |
| 202 | 4193028 | 4193216 | - | NZ_CP031146.1 | Pseudomonas plecoglossicida |
| 203 | 1112623 | 1112841 | + | NZ_CP007445.1 | Gilliamella apicola |
| 204 | 5770617 | 5770823 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 205 | 4027392 | 4027580 | + | NZ_CP009365.1 | Pseudomonas soli |
| 206 | 5710041 | 5710247 | + | NZ_CP035088.1 | Pseudomonas viciae |
| 207 | 5187952 | 5188158 | - | NZ_CP048810.1 | Pseudomonas bijieensis |
| 208 | 949977 | 950165 | - | NZ_CP018420.1 | Pseudomonas veronii |
| 209 | 1014529 | 1014717 | - | NZ_CP027756.1 | Pseudomonas synxantha |
| 210 | 5844455 | 5844640 | + | NZ_CP061079.1 | Pseudomonas chlororaphis |
| 211 | 2587058 | 2587264 | + | NZ_CP014262.1 | Pseudomonas corrugata |
| 212 | 892868 | 893056 | - | NZ_CP023272.1 | Pseudomonas lurida |
| 213 | 113807 | 114001 | - | NZ_LS483429.1 | Haemophilus aegyptius |
| 214 | 871372 | 871560 | - | NZ_CP027723.1 | Pseudomonas orientalis |
| 215 | 874280 | 874468 | - | NZ_CP010896.1 | Pseudomonas simiae |
| 216 | 4417794 | 4417985 | - | NZ_CP009533.1 | Pseudomonas rhizosphaerae |
| 217 | 897691 | 897897 | + | NZ_LS483458.1 | Haemophilus haemolyticus |
| 218 | 1749612 | 1749812 | - | NZ_CP016605.1 | Bisgaardia hudsonensis |
| 219 | 5880699 | 5880902 | + | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 220 | 428336 | 428536 | - | NZ_CP060084.1 | Teredinibacter haidensis |
| 221 | 4083779 | 4083967 | - | NZ_CP022684.1 | Ketobacter alkanivorans |
| 222 | 2014084 | 2014299 | + | NZ_LS483443.1 | Aggregatibacter segnis ATCC 33393 |
| 223 | 5242622 | 5242810 | + | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 224 | 2272215 | 2272406 | - | NZ_CP020038.1 | Agarilytica rhodophyticola |
| 225 | 5410071 | 5410268 | - | NZ_CP043046.1 | Pigmentiphaga aceris |
| 226 | 4087281 | 4087472 | + | NZ_CP017754.1 | Cupriavidus malaysiensis |
| 227 | 1224486 | 1224671 | + | NZ_CP046531.1 | Mannheimia ovis |
| 228 | 1375581 | 1375766 | + | NZ_CP055305.1 | Mannheimia pernigra |
| 229 | 733560 | 733742 | + | NZ_LT906482.1 | Eikenella corrodens |
| 230 | 2748916 | 2749134 | - | NZ_CP072844.1 | Psychrosphaera aestuarii |
| 231 | 5603666 | 5603866 | + | NZ_CP062252.1 | Pseudomonas allokribbensis |
| 232 | 647063 | 647260 | - | NZ_CP009832.1 | Burkholderia multivorans ATCC BAA-247 |
| 233 | 3359932 | 3360117 | - | NZ_LS483250.1 | Moritella yayanosii |
| 234 | 349900 | 350085 | - | NZ_CP045650.1 | Acinetobacter wanghuae |
| 235 | 1628011 | 1628208 | + | NZ_CP031467.1 | Paraburkholderia caffeinilytica |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP070624.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00482.25 | 0.94 | 221 | 2633 | same-strand | Type II secretion system (T2SS), protein F |
| 2 | PF01121.22 | 0.98 | 229 | 771.0 | same-strand | Dephospho-CoA kinase |
| 3 | PF07072.13 | 0.77 | 180 | 34 | same-strand | Cell division protein |
| 4 | PF00293.30 | 0.64 | 150 | 49 | opposite-strand | NUDIX domain |
| 5 | PF14815.8 | 0.65 | 151 | 49 | opposite-strand | NUDIX domain |
| 6 | PF00437.22 | 0.79 | 184 | 3859 | same-strand | Type II/IV secretion system protein |
++ More..