Result : Q58Y44
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | (2R)-sulfolactate sulfo-lyase subunit alpha (EC 4.4.1.24) (Sulfolactate sulfo-lyase A) |
| NCBI Accession ID | AY704413.1 |
| Organism | Paracoccus pantotrophus (Thiosphaera pantotropha) |
| Left | 917 |
| Right | 1120 |
| Strand | + |
| Nucleotide Sequence | ATGCTGTGCGTCGTGACGTCCGACAACTCGGACTTTCGCCTGACCGCCAAGGCCGACATTCCTATCGGCCACAAGGTGGCGCTGAAGGCGCTGAAGGCCGGCGATACGGTCATCAAGTATCACGAGGACATCGGCAAGATGGTCGGCGATGCCGAGGTTGGCGGCCACGTCCATACCCACAACTGCAAAACGAAACGGTGGTAA |
| Sequence | MLCVVTSDNSDFRLTAKADIPIGHKVALKALKAGDTVIKYHEDIGKMVGDAEVGGHVHTHNCKTKRW |
| Source of smORF | Swiss-Prot |
| Function | Together with SuyB, desulfonates sulfolactate to pyruvate and sulfite. {ECO:0000269|Pubmed:15758220}. |
| Pubmed ID | 15758220 |
| Domain | |
| Functional Category | Others |
| Uniprot ID | Q58Y44 |
| ORF Length (Amino Acid) | 67 |
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| Conservation Analysis |
No. of Species: 48
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3152340 | 3152543 | - | NZ_CP024899.1 | Rhodobaca barguzinensis |
| 2 | 811983 | 812186 | + | NZ_CP015421.1 | Rhodovulum sulfidophilum |
| 3 | 1279776 | 1279979 | + | NZ_CP021404.1 | Pacificitalea manganoxidans |
| 4 | 3826577 | 3826780 | + | NZ_CP034348.1 | Roseovarius faecimaris |
| 5 | 2156865 | 2157068 | + | NC_009952.1 | Dinoroseobacter shibae DFL 12 = DSM 16493 |
| 6 | 1257812 | 1258015 | + | NZ_CP010855.1 | Marinovum algicola DG 898 |
| 7 | 3934085 | 3934288 | + | NZ_CP017147.1 | Bosea vaviloviae |
| 8 | 609794 | 609997 | + | NC_015684.1 | Afipia carboxidovorans OM5 |
| 9 | 2621115 | 2621318 | + | NZ_CP018171.1 | Mesorhizobium oceanicum |
| 10 | 111282 | 111485 | - | NZ_CP041241.1 | Ensifer mexicanus |
| 11 | 4649892 | 4650095 | - | NZ_CP039690.1 | Phreatobacter stygius |
| 12 | 334076 | 334279 | - | NZ_CP025611.1 | Niveispirillum cyanobacteriorum |
| 13 | 157172 | 157375 | - | NZ_AP014946.1 | Variibacter gotjawalensis |
| 14 | 3797779 | 3798012 | + | NC_011894.1 | Methylobacterium nodulans ORS 2060 |
| 15 | 3891436 | 3891669 | - | NC_014664.1 | Rhodomicrobium vannielii ATCC 17100 |
| 16 | 1030084 | 1030278 | - | NZ_CP043538.1 | Methylobacterium mesophilicum SR1.6/6 |
| 17 | 234756 | 234950 | - | NC_010510.1 | Methylobacterium radiotolerans JCM 2831 |
| 18 | 4084727 | 4084915 | + | NZ_CP016171.1 | Bordetella bronchialis |
| 19 | 1882740 | 1882928 | - | NZ_CP016172.1 | Bordetella flabilis |
| 20 | 4129833 | 4130021 | - | NZ_CP053069.1 | Usitatibacter rugosus |
| 21 | 3588511 | 3588699 | - | NZ_CP053073.1 | Usitatibacter palustris |
| 22 | 956932 | 957096 | - | NZ_CP041352.1 | Casimicrobium huifangae |
| 23 | 3837463 | 3837627 | + | NC_018025.1 | Desulfomonile tiedjei DSM 6799 |
| 24 | 1065882 | 1066070 | + | NZ_CP066076.1 | Paraburkholderia ginsengisoli |
| 25 | 2469002 | 2469190 | + | NC_013173.1 | Desulfomicrobium baculatum DSM 4028 |
| 26 | 677497 | 677670 | + | NZ_CP046915.1 | Paraburkholderia acidisoli |
| 27 | 684549 | 684737 | + | NZ_CP046915.1 | Paraburkholderia acidisoli |
| 28 | 1198853 | 1199023 | + | NZ_CP021255.1 | Desulfobulbus oralis |
| 29 | 1007082 | 1007252 | - | NC_021289.1 | Caballeronia insecticola |
| 30 | 2583784 | 2583972 | - | NZ_LT671418.1 | Herminiimonas arsenitoxidans |
| 31 | 1646251 | 1646415 | - | NZ_CP039543.1 | Desulfovibrio marinus |
| 32 | 3166647 | 3166835 | + | NZ_CP011568.3 | Pandoraea thiooxydans |
| 33 | 2212774 | 2212974 | + | NC_011830.1 | Desulfitobacterium hafniense DCB-2 |
| 34 | 4690130 | 4690336 | - | NC_011830.1 | Desulfitobacterium hafniense DCB-2 |
| 35 | 451134 | 451322 | - | NC_010170.1 | Bordetella petrii |
| 36 | 5481774 | 5481938 | - | NZ_CP053986.1 | Achromobacter denitrificans |
| 37 | 4325478 | 4325642 | + | NZ_CP003915.1 | Advenella mimigardefordensis DPN7 |
| 38 | 3994839 | 3995027 | + | NC_017964.1 | Advenella kashmirensis WT001 |
| 39 | 227272 | 227436 | + | NZ_CP054626.1 | Cupriavidus gilardii |
| 40 | 2641883 | 2642071 | - | NC_013223.1 | Desulfohalobium retbaense DSM 5692 |
| 41 | 1355634 | 1355804 | - | NZ_CP023276.1 | Polynucleobacter difficilis |
| 42 | 3176904 | 3177110 | - | NC_019903.1 | Desulfitobacterium dichloroeliminans LMG P-21439 |
| 43 | 3174029 | 3174235 | - | NC_019903.1 | Desulfitobacterium dichloroeliminans LMG P-21439 |
| 44 | 1409528 | 1409716 | - | NZ_CP007501.1 | Polynucleobacter duraquae |
| 45 | 1889166 | 1889369 | - | NZ_CP077717.1 | Saccharolobus shibatae B12 |
| 46 | 3265795 | 3266007 | - | NZ_CP022121.1 | Dehalobacterium formicoaceticum |
| 47 | 7201582 | 7201746 | + | NZ_AP021874.1 | Desulfosarcina alkanivorans |
| 48 | 3821618 | 3821824 | - | NC_018017.1 | Desulfitobacterium dehalogenans ATCC 51507 |
| 49 | 514891 | 515055 | + | NZ_CP032519.1 | Cupriavidus oxalaticus |
| 50 | 2517856 | 2518053 | + | NZ_CP045484.1 | Sulfurisphaera ohwakuensis |
| 51 | 486407 | 486610 | - | NC_011661.1 | Dictyoglomus turgidum DSM 6724 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP024899.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF04295.15 | 0.96 | 46 | 13 | same-strand | D-galactarate dehydratase / Altronate hydrolase, C terminus |
| 2 | PF02615.16 | 0.6 | 29 | 2240.0 | same-strand | Malate/L-lactate dehydrogenase |
| 3 | PF00392.23 | 0.62 | 30 | 307.5 | opposite-strand | Bacterial regulatory proteins, gntR family |
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