Result : Q52983
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Probable K(+)/H(+) antiporter subunit F (pH adaptation potassium efflux system protein F) (Pha system subunit F) |
| NCBI Accession ID | X93358.1 |
| Organism | Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) |
| Left | 6312 |
| Right | 6590 |
| Strand | + |
| Nucleotide Sequence | ATGGAGCTTGCCGTCGTCTGGTCCGTGCTCGTCGCACAGACCATGCTTGCGCTGGCCATGGCCTTCGCGCTCTACCGAATGGCCAGAGGACCGAGGGCCCAGGACCGCATTCTCGGTCTCGACACGCTCTACATCAATGCGATGCTGATGCTCATCACCTTCGGTATCCGCACGGCGAATACGGTCTATTTCGAAACGGCGCTGATCATCGCTGTGATCGGCTTCGCCTCGTCGATCGCGCTGGCAAAGTTCCTCATGCGCGGCGAGGTGATCGAATGA |
| Sequence | MELAVVWSVLVAQTMLALAMAFALYRMARGPRAQDRILGLDTLYINAMLMLITFGIRTANTVYFETALIIAVIGFASSIALAKFLMRGEVIE |
| Source of smORF | Swiss-Prot |
| Function | Part of a K(+) efflux system which is required for the adaptation of R.meliloti to alkaline pH as well as for the infection process during symbiotic nodule development. |
| Pubmed ID | 9680201 11481430 11474104 |
| Domain | CDD:415596 |
| Functional Category | Others |
| Uniprot ID | Q52983 |
| ORF Length (Amino Acid) | 92 |
++ More..
| Conservation Analysis |
No. of Species: 179
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3148750 | 3149028 | + | NC_020528.1 | Sinorhizobium meliloti 2011 |
| 2 | 3365170 | 3365397 | + | NZ_CP029451.1 | Sinorhizobium fredii CCBAU 25509 |
| 3 | 3365448 | 3365675 | + | NZ_CP013107.1 | Sinorhizobium americanum |
| 4 | 3241787 | 3242065 | + | NZ_CP015880.1 | Ensifer adhaerens |
| 5 | 2873329 | 2873565 | + | NZ_CP023067.1 | Ensifer sojae CCBAU 05684 |
| 6 | 2881449 | 2881685 | + | NZ_CP034909.1 | Ensifer alkalisoli |
| 7 | 3846703 | 3846930 | + | NZ_CP041238.1 | Ensifer mexicanus |
| 8 | 2957648 | 2957926 | + | NC_015684.1 | Afipia carboxidovorans OM5 |
| 9 | 147396 | 147632 | - | NZ_CP053856.1 | Rhizobium pusense |
| 10 | 148752 | 148988 | - | NZ_CP061003.1 | Agrobacterium tumefaciens |
| 11 | 1632847 | 1633083 | + | NZ_CP048632.1 | Rhizobium oryzihabitans |
| 12 | 30298 | 30531 | + | NZ_CP029355.1 | Azospirillum thermophilum |
| 13 | 2526434 | 2526673 | + | NC_014217.1 | Starkeya novella DSM 506 |
| 14 | 144326 | 144556 | - | NZ_CP012405.1 | Azospirillum thiophilum |
| 15 | 2890439 | 2890717 | + | NC_007406.1 | Nitrobacter winogradskyi Nb-255 |
| 16 | 1120739 | 1121017 | - | NC_007964.1 | Nitrobacter hamburgensis X14 |
| 17 | 290080 | 290307 | - | NZ_CP020540.1 | Sphingobium herbicidovorans |
| 18 | 226189 | 226470 | + | NC_020541.1 | Rhodanobacter denitrificans |
| 19 | 2059245 | 2059526 | + | NC_004757.1 | Nitrosomonas europaea ATCC 19718 |
| 20 | 260700 | 260927 | - | NZ_CP029832.1 | Azospirillum ramasamyi |
| 21 | 2418752 | 2418982 | + | NC_011144.1 | Phenylobacterium zucineum HLK1 |
| 22 | 3081956 | 3082228 | + | NZ_CP058907.1 | Rhodopseudomonas palustris |
| 23 | 208861 | 209109 | + | NZ_CP049249.1 | Rhizobium rhizoryzae |
| 24 | 1667201 | 1667449 | - | NZ_AP019755.1 | Nitrosomonas stercoris |
| 25 | 5114114 | 5114344 | - | NZ_CP039546.1 | Methylorubrum populi |
| 26 | 797824 | 798054 | + | NC_020062.1 | Rhizobium tropici CIAT 899 |
| 27 | 2795550 | 2795786 | - | NZ_CP022048.2 | Brevundimonas vesicularis |
| 28 | 526512 | 526748 | - | NZ_CP048630.1 | Ancylobacter pratisalsi |
| 29 | 1799667 | 1799948 | + | NC_008344.1 | Nitrosomonas eutropha C91 |
| 30 | 149835 | 150065 | + | NZ_CP035510.1 | Haematobacter massiliensis |
| 31 | 1324471 | 1324737 | + | NZ_CP034179.1 | Caenibius tardaugens NBRC 16725 |
| 32 | 2676755 | 2676982 | + | NC_022997.1 | Hyphomicrobium nitrativorans NL23 |
| 33 | 755853 | 756089 | + | NZ_CP019937.1 | Ketogulonicigenium robustum |
| 34 | 453652 | 453879 | - | NZ_CP010401.1 | Bartonella ancashensis |
| 35 | 941222 | 941458 | + | NZ_CP012908.1 | Ketogulonicigenium vulgare |
| 36 | 1869350 | 1869631 | - | NZ_HG965802.1 | Bartonella henselae |
| 37 | 880012 | 880242 | + | NZ_LR723670.1 | Pseudorhizobium flavum |
| 38 | 1554562 | 1554789 | - | NZ_AP019773.1 | Bartonella quintana |
| 39 | 2305689 | 2305916 | - | NC_012846.1 | Bartonella grahamii as4aup |
| 40 | 1563093 | 1563326 | - | NC_020300.1 | Bartonella australis Aust/NH1 |
| 41 | 3101649 | 3101873 | - | NZ_LT907988.1 | Orrella dioscoreae |
| 42 | 1495317 | 1495571 | + | NZ_CP041690.1 | Youhaiella tibetensis |
| 43 | 4425663 | 4425899 | - | NZ_CP054021.1 | Rhizobium indicum |
| 44 | 2913537 | 2913818 | - | NZ_LR588407.1 | Brevundimonas vancanneytii |
| 45 | 200039 | 200314 | - | NZ_LR134529.1 | Bartonella vinsonii |
| 46 | 912796 | 913023 | - | NZ_CP058235.1 | Bartonella alsatica |
| 47 | 53217 | 53444 | + | NZ_CP029425.1 | Bradyrhizobium ottawaense |
| 48 | 514936 | 515163 | - | NZ_LS398110.1 | Bradyrhizobium vignae |
| 49 | 5869329 | 5869610 | + | NZ_LR134302.1 | Achromobacter spanius |
| 50 | 1972055 | 1972282 | - | NZ_CP031844.2 | Bartonella krasnovii |
| 51 | 1837464 | 1837691 | - | NZ_LR134527.1 | Bartonella elizabethae |
| 52 | 1754577 | 1754858 | - | NZ_CP053986.1 | Achromobacter denitrificans |
| 53 | 2583582 | 2583854 | - | NC_010161.1 | Bartonella tribocorum CIP 105476 |
| 54 | 257428 | 257655 | - | NZ_CP031843.2 | Bartonella kosoyi |
| 55 | 2990650 | 2990883 | - | NZ_CP024422.1 | Paracoccus yeei |
| 56 | 3345821 | 3346054 | + | NZ_CP030239.1 | Paracoccus mutanolyticus |
| 57 | 41314 | 41541 | + | NC_008783.1 | Bartonella bacilliformis KC583 |
| 58 | 2130277 | 2130504 | + | NZ_CP032509.1 | Georhizobium profundi |
| 59 | 1460984 | 1461220 | + | NZ_CP060790.1 | Acidovorax monticola |
| 60 | 195565 | 195804 | - | NZ_CP068983.1 | Paradevosia shaoguanensis |
| 61 | 1561934 | 1562176 | + | NZ_CP016278.1 | Diaphorobacter polyhydroxybutyrativorans |
| 62 | 2267785 | 2268021 | + | NZ_CP020470.1 | Rhodobacter blasticus |
| 63 | 2300503 | 2300739 | + | NZ_CP042304.1 | Devosia ginsengisoli |
| 64 | 3089112 | 3089336 | + | NZ_CP038034.1 | Achromobacter insolitus |
| 65 | 643073 | 643354 | + | NC_015677.1 | Ramlibacter tataouinensis TTB310 |
| 66 | 2356288 | 2356569 | - | NC_018518.1 | Bordetella pertussis 18323 |
| 67 | 2626146 | 2626427 | - | NZ_AP019378.1 | Bordetella parapertussis |
| 68 | 2859386 | 2859667 | - | NZ_LR134326.1 | Bordetella bronchiseptica |
| 69 | 1774204 | 1774485 | + | NZ_LN832559.1 | Paracoccus aminovorans |
| 70 | 892223 | 892465 | + | NZ_CP060783.1 | Diaphorobacter aerolatus |
| 71 | 3905077 | 3905355 | + | NZ_CP046621.1 | Pseudomonas alkylphenolica |
| 72 | 2186696 | 2186932 | + | NZ_CP027792.1 | Pulveribacter suum |
| 73 | 3642139 | 3642375 | + | NC_008752.1 | Acidovorax citrulli AAC00-1 |
| 74 | 2138836 | 2139117 | - | NC_010645.1 | Bordetella avium 197N |
| 75 | 2687229 | 2687510 | - | NC_010170.1 | Bordetella petrii |
| 76 | 2531275 | 2531505 | - | NZ_CP020121.1 | Comamonas kerstersii |
| 77 | 2073042 | 2073320 | - | NZ_CP071706.1 | Pseudomonas donghuensis |
| 78 | 321955 | 322179 | - | NC_006513.1 | Aromatoleum aromaticum EbN1 |
| 79 | 519114 | 519338 | - | NZ_CP011971.1 | Steroidobacter denitrificans |
| 80 | 2981994 | 2982272 | + | NZ_CP009365.1 | Pseudomonas soli |
| 81 | 2380863 | 2381141 | - | NZ_CP014870.1 | Pseudomonas silesiensis |
| 82 | 2397968 | 2398246 | + | NZ_CP014205.2 | Pseudomonas glycinae |
| 83 | 4372397 | 4372675 | + | NZ_CP018420.1 | Pseudomonas veronii |
| 84 | 412020 | 412256 | + | NZ_CP022603.1 | [Ochrobactrum] quorumnocens |
| 85 | 120669 | 120950 | + | NZ_CP049243.1 | Rhizobium pseudoryzae |
| 86 | 5355607 | 5355885 | - | NZ_CP031146.1 | Pseudomonas plecoglossicida |
| 87 | 1981950 | 1982228 | - | NZ_CP007039.1 | Pseudomonas cichorii JBC1 |
| 88 | 3879377 | 3879655 | + | NZ_CP068034.2 | Pseudomonas syringae |
| 89 | 3784306 | 3784575 | + | NZ_CP042804.1 | Pseudomonas amygdali pv. tabaci str. ATCC 11528 |
| 90 | 2330449 | 2330727 | - | NZ_CP067022.1 | Pseudomonas cannabina pv. alisalensis |
| 91 | 614823 | 615059 | + | NZ_CP064062.1 | Brucella anthropi |
| 92 | 4552236 | 4552484 | - | NZ_AP019700.1 | Stella humosa |
| 93 | 1163691 | 1163927 | + | NZ_CP048635.1 | Rhizobium oryzihabitans |
| 94 | 730024 | 730260 | - | NC_007624.1 | Brucella abortus 2308 |
| 95 | 787676 | 787912 | - | NC_022906.1 | Brucella ceti TE10759-12 |
| 96 | 458274 | 458510 | + | NC_009504.1 | Brucella ovis ATCC 25840 |
| 97 | 804023 | 804259 | - | NC_003318.1 | Brucella melitensis bv. 1 str. 16M |
| 98 | 484711 | 484947 | + | NC_010104.1 | Brucella canis ATCC 23365 |
| 99 | 484762 | 484998 | + | NC_004311.2 | Brucella suis 1330 |
| 100 | 486165 | 486401 | + | NC_013118.1 | Brucella microti CCM 4915 |
| 101 | 557836 | 558072 | - | NZ_LT605586.1 | Brucella inopinata |
| 102 | 3923357 | 3923635 | + | NC_004578.1 | Pseudomonas syringae pv. tomato str. DC3000 |
| 103 | 1557700 | 1557966 | + | NC_022041.1 | Paracoccus aminophilus JCM 7686 |
| 104 | 3894247 | 3894525 | + | NZ_CP062253.1 | Pseudomonas gozinkensis |
| 105 | 4094004 | 4094231 | + | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 106 | 3960928 | 3961206 | + | NZ_CP027756.1 | Pseudomonas synxantha |
| 107 | 3707374 | 3707652 | + | NZ_CP029608.1 | Pseudomonas kribbensis |
| 108 | 3933547 | 3933825 | + | NZ_CP062252.1 | Pseudomonas allokribbensis |
| 109 | 229707 | 229979 | - | NZ_CP009293.1 | Novosphingobium pentaromativorans US6-1 |
| 110 | 2686570 | 2686818 | - | NZ_CP035088.1 | Pseudomonas viciae |
| 111 | 4181445 | 4181672 | + | NZ_CP051487.1 | Pseudomonas umsongensis |
| 112 | 2892123 | 2892365 | + | NZ_CP060714.1 | Diaphorobacter ruginosibacter |
| 113 | 1922652 | 1922930 | - | NZ_CP024159.1 | Pseudomonas mosselii |
| 114 | 3812788 | 3813066 | + | NC_008027.1 | Pseudomonas entomophila L48 |
| 115 | 3579582 | 3579860 | + | NZ_CP027723.1 | Pseudomonas orientalis |
| 116 | 3739875 | 3740153 | + | NZ_CP023272.1 | Pseudomonas lurida |
| 117 | 2108787 | 2109065 | - | NZ_CP012400.2 | Pseudomonas yamanorum |
| 118 | 2293583 | 2293834 | - | NZ_CP062158.2 | Pseudomonas lundensis |
| 119 | 3762513 | 3762791 | + | NZ_CP054205.1 | Pseudomonas rhodesiae |
| 120 | 2052749 | 2053027 | - | NZ_CP022562.1 | Pseudomonas monteilii |
| 121 | 4230242 | 4230502 | + | NZ_CP023449.1 | Rhizorhabdus dicambivorans |
| 122 | 3579516 | 3579752 | + | NZ_AP017655.1 | Sphingobium cloacae |
| 123 | 4266043 | 4266291 | + | NZ_CP024645.1 | Rhizobacter gummiphilus |
| 124 | 873675 | 873944 | + | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 125 | 2551798 | 2552025 | - | NZ_CP070503.1 | Pseudomonas atacamensis |
| 126 | 1738676 | 1738906 | - | NZ_CP021359.1 | Acidovorax carolinensis |
| 127 | 3116086 | 3116310 | + | NZ_CP012371.1 | Nitrosospira briensis C-128 |
| 128 | 1657820 | 1658101 | + | NZ_CP043146.1 | Bordetella holmesii |
| 129 | 3282583 | 3282864 | + | NZ_CP059467.1 | Aromatoleum bremense |
| 130 | 2862199 | 2862450 | - | NZ_CP049044.1 | Pseudomonas psychrophila |
| 131 | 1124008 | 1124289 | - | NZ_CP045072.1 | Paracoccus kondratievae |
| 132 | 1411077 | 1411325 | + | NZ_CP048810.1 | Pseudomonas bijieensis |
| 133 | 1608939 | 1609175 | - | NC_008781.1 | Polaromonas naphthalenivorans CJ2 |
| 134 | 2805113 | 2805367 | - | NZ_CP043575.1 | Comamonas koreensis |
| 135 | 1683040 | 1683270 | - | NZ_CP051298.1 | Alicycliphilus denitrificans |
| 136 | 2364607 | 2364831 | - | NZ_CP021106.3 | Nitrosospira lacus |
| 137 | 103015 | 103296 | + | NZ_CP022749.1 | Sphingobium xenophagum |
| 138 | 19836 | 20117 | + | NZ_CP022747.1 | Sphingobium xenophagum |
| 139 | 3716418 | 3716675 | - | NZ_CP004387.1 | Alcanivorax pacificus W11-5 |
| 140 | 620472 | 620699 | - | NZ_CP009533.1 | Pseudomonas rhizosphaerae |
| 141 | 1163155 | 1163406 | + | NZ_CP014262.1 | Pseudomonas corrugata |
| 142 | 2227572 | 2227850 | + | NZ_CP012676.1 | Pseudomonas versuta |
| 143 | 55711 | 55941 | - | NZ_CP018839.1 | Thauera chlorobenzoica |
| 144 | 1802501 | 1802737 | - | NZ_CP032101.1 | Malaciobacter marinus |
| 145 | 3694490 | 3694738 | + | NZ_CP010896.1 | Pseudomonas simiae |
| 146 | 2180940 | 2181176 | - | NC_015138.1 | Acidovorax avenae subsp. avenae ATCC 19860 |
| 147 | 2923433 | 2923711 | - | NZ_LT671418.1 | Herminiimonas arsenitoxidans |
| 148 | 1676089 | 1676370 | + | NZ_LR778301.1 | Denitratisoma oestradiolicum |
| 149 | 3973575 | 3973823 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 150 | 1801674 | 1801910 | - | NZ_CP042812.1 | Malaciobacter canalis |
| 151 | 1584551 | 1584781 | - | NZ_CP054840.1 | Acidovorax antarcticus |
| 152 | 2930092 | 2930370 | - | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 153 | 88893 | 89123 | + | NZ_CP028339.1 | Thauera aromatica K172 |
| 154 | 2706519 | 2706746 | - | NZ_CP061079.1 | Pseudomonas chlororaphis |
| 155 | 3703908 | 3704186 | + | NZ_CP056030.1 | Pseudomonas eucalypticola |
| 156 | 1979281 | 1979508 | - | NC_019940.1 | Thioflavicoccus mobilis 8321 |
| 157 | 812992 | 813228 | - | NZ_CP029843.1 | Lysobacter maris |
| 158 | 1891810 | 1892046 | + | NZ_CP030944.1 | Arcobacter aquimarinus |
| 159 | 1582199 | 1582435 | + | NZ_CP014671.1 | Immundisolibacter cernigliae |
| 160 | 1844828 | 1845064 | + | NZ_AP014862.1 | Pseudomonas furukawaii |
| 161 | 1954833 | 1955069 | + | NZ_CP053833.1 | Arcobacter cloacae |
| 162 | 4417159 | 4417389 | + | NZ_CP059560.1 | Aromatoleum petrolei |
| 163 | 312606 | 312830 | + | NZ_CP013119.1 | Alcaligenes faecalis |
| 164 | 1040661 | 1040894 | - | NZ_CP028901.1 | Algicoccus marinus |
| 165 | 2791860 | 2792090 | + | NZ_CP019239.1 | Rhodoferax saidenbachensis |
| 166 | 7256329 | 7256556 | + | NZ_CP040017.1 | Massilia umbonata |
| 167 | 1653876 | 1654160 | - | NZ_HG916765.1 | Castellaniella defragrans 65Phen |
| 168 | 214638 | 214907 | - | NZ_CP020539.1 | Sphingobium herbicidovorans |
| 169 | 1762197 | 1762424 | - | NZ_CP051461.1 | Polaromonas vacuolata |
| 170 | 2521993 | 2522226 | + | NZ_CP014646.1 | Thauera humireducens |
| 171 | 2131582 | 2131836 | + | NZ_LR134378.1 | Lautropia mirabilis |
| 172 | 2423380 | 2423649 | + | NZ_CP012159.1 | Chondromyces crocatus |
| 173 | 3175959 | 3176195 | - | NZ_LR215729.2 | Pseudomonas marincola |
| 174 | 1905774 | 1906052 | - | NZ_CP046603.1 | Lysobacter soli |
| 175 | 3181879 | 3182109 | + | NZ_CP034464.1 | Undibacterium parvum |
| 176 | 313121 | 313357 | - | NZ_CP017715.1 | Marinobacter salinus |
| 177 | 11975976 | 11976254 | + | NC_010162.1 | Sorangium cellulosum So ce56 |
| 178 | 3237219 | 3237455 | + | NZ_CP043042.1 | Marinobacter fonticola |
| 179 | 1372601 | 1372837 | - | NZ_CP020931.1 | Marinobacter salarius |
| 180 | 4293258 | 4293494 | - | NC_008786.1 | Verminephrobacter eiseniae EF01-2 |
| 181 | 1366392 | 1366628 | + | NZ_CP064338.1 | Schlegelella thermodepolymerans |
| 182 | 754339 | 754614 | - | NZ_CP037867.1 | Hydrogenophaga pseudoflava |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_020528.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00361.22 | 0.99 | 178 | 2403 | same-strand | Proton-conducting membrane transporter |
| 2 | PF04039.15 | 0.99 | 178 | 2502.0 | same-strand | Domain related to MnhB subunit of Na+/H+ antiporter |
| 3 | PF13244.8 | 0.99 | 178 | 2502.0 | same-strand | Domain of unknown function (DUF4040) |
| 4 | PF00662.22 | 0.96 | 172 | 2502.0 | same-strand | NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus |
| 5 | PF00420.26 | 1.0 | 179 | 2158.0 | same-strand | NADH-ubiquinone/plastoquinone oxidoreductase chain 4L |
| 6 | PF01899.18 | 0.99 | 178 | 30.0 | same-strand | Na+/H+ ion antiporter subunit |
| 7 | PF03334.16 | 0.99 | 178 | -3.0 | same-strand | Na+/H+ antiporter subunit |
++ More..