* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LR594049.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF16929.7
|
1.0
|
2
|
5696.0
|
same-strand
|
Accessory Sec system GspB-transporter
|
2
|
PF15432.8
|
1.0
|
2
|
5233.5
|
same-strand
|
Accessory Sec secretory system ASP3
|
3
|
PF07517.16
|
1.0
|
2
|
2862.5
|
same-strand
|
SecA DEAD-like domain
|
4
|
PF01043.22
|
1.0
|
2
|
2862.5
|
same-strand
|
SecA preprotein cross-linking domain
|
5
|
PF07516.15
|
1.0
|
2
|
2862.5
|
same-strand
|
SecA Wing and Scaffold domain
|
6
|
PF13692.8
|
1.0
|
2
|
1335.5
|
same-strand
|
Glycosyl transferases group 1
|
7
|
PF17000.7
|
1.0
|
2
|
3.5
|
same-strand
|
Accessory secretory protein Sec, Asp5
|
++ More..