Result : Q491Y5
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 50S ribosomal protein L31 |
| NCBI Accession ID | CP000016.1 |
| Organism | Blochmannia pennsylvanicus (strain BPEN) |
| Left | 743051 |
| Right | 743299 |
| Strand | - |
| Nucleotide Sequence | ATGAAGAAAAATGTGCATCCAAAATACAATGAAATATCTGCATATTGTTCGTGTGGAAATATTATTAATACTAAATCTACTTTAAATCGAAACTTAAATATAGATGTGTGTCATTTGTGTCATCCATTTTATACAGGTACACAACGTATACTAGATACACGTGGGCGTGTAAATATTTTTAACAAACGCTTTAATCTTTCTATTAATGCTGATTTTTTACCGATTGACAAAAAATTAAATAAAAAGTAA |
| Sequence | MKKNVHPKYNEISAYCSCGNIINTKSTLNRNLNIDVCHLCHPFYTGTQRILDTRGRVNIFNKRFNLSINADFLPIDKKLNKK |
| Source of smORF | Swiss-Prot |
| Function | Binds the 23S rRNA. {ECO:0000255|HAMAP-Rule:MF_00501}. |
| Pubmed ID | 16077009 |
| Domain | CDD:412343 |
| Functional Category | Metal-binding_and_Ribosomal_protein |
| Uniprot ID | Q491Y5 |
| ORF Length (Amino Acid) | 82 |
++ More..
| Conservation Analysis |
No. of Species: 295
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 4560020 | 4560235 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 2 | 804350 | 804565 | + | NZ_LR134510.1 | Actinobacillus delphinicola |
| 3 | 1304611 | 1304823 | + | NZ_CP015425.1 | [Haemophilus] ducreyi |
| 4 | 1358223 | 1358435 | - | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 5 | 1883335 | 1883547 | - | NZ_CP046531.1 | Mannheimia ovis |
| 6 | 706608 | 706820 | - | NZ_CP006954.1 | Bibersteinia trehalosi USDA-ARS-USMARC-188 |
| 7 | 1870088 | 1870300 | + | NZ_CP018804.1 | Histophilus somni |
| 8 | 402825 | 403037 | + | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 9 | 1173659 | 1173871 | - | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 10 | 393181 | 393393 | + | NZ_CP009159.1 | Actinobacillus suis ATCC 33415 |
| 11 | 209300 | 209515 | + | NZ_CP012621.1 | Zobellella denitrificans |
| 12 | 1726164 | 1726379 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 13 | 593275 | 593487 | - | NZ_LR134167.1 | Avibacterium volantium |
| 14 | 5289900 | 5290115 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 15 | 5204424 | 5204639 | - | NZ_LR134494.1 | Serratia quinivorans |
| 16 | 4098354 | 4098566 | - | NZ_CP061511.1 | Mixta calida |
| 17 | 929136 | 929351 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 18 | 1757635 | 1757847 | + | NZ_CP019706.1 | Pantoea alhagi |
| 19 | 1343475 | 1343690 | - | NZ_CP065640.1 | Serratia rubidaea |
| 20 | 1951887 | 1952099 | - | NZ_CP055305.1 | Mannheimia pernigra |
| 21 | 833189 | 833401 | + | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 22 | 3733352 | 3733567 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 23 | 3641697 | 3641912 | - | NZ_CP065534.1 | Lonsdalea populi |
| 24 | 4407422 | 4407637 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 25 | 2033849 | 2034061 | + | NZ_CP016605.1 | Bisgaardia hudsonensis |
| 26 | 750469 | 750690 | + | NZ_CP031093.1 | Hydrocarboniclastica marina |
| 27 | 3232882 | 3233094 | - | NZ_CP027107.1 | Cronobacter sakazakii |
| 28 | 1299 | 1511 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 29 | 146384 | 146596 | + | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 30 | 217397 | 217609 | + | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 31 | 3843066 | 3843278 | - | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 32 | 211552 | 211764 | + | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 33 | 1135093 | 1135305 | + | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 34 | 5108361 | 5108576 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 35 | 1430084 | 1430296 | - | NZ_CP006944.1 | Mannheimia varigena USDA-ARS-USMARC-1312 |
| 36 | 84808 | 85023 | + | NZ_CP071320.1 | Serratia ureilytica |
| 37 | 703896 | 704108 | - | NZ_LS483443.1 | Aggregatibacter segnis ATCC 33393 |
| 38 | 4646138 | 4646353 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 39 | 226860 | 227072 | + | NZ_CP009610.1 | Haemophilus influenzae |
| 40 | 667187 | 667399 | - | NZ_LS483458.1 | Haemophilus haemolyticus |
| 41 | 270948 | 271160 | + | NZ_LS483429.1 | Haemophilus aegyptius |
| 42 | 281626 | 281838 | - | NZ_LT906463.1 | Haemophilus pittmaniae |
| 43 | 2126486 | 2126698 | - | NZ_CP040863.1 | Rodentibacter heylii |
| 44 | 4324390 | 4324602 | - | NZ_CP041036.1 | Shewanella polaris |
| 45 | 1265168 | 1265380 | - | NZ_CP015029.1 | Frederiksenia canicola |
| 46 | 4316933 | 4317148 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 47 | 5060176 | 5060391 | - | NZ_LT906479.1 | Serratia ficaria |
| 48 | 675981 | 676193 | + | NZ_CP034015.1 | Shewanella livingstonensis |
| 49 | 4404182 | 4404394 | - | NZ_CP026377.1 | Mixta gaviniae |
| 50 | 3542288 | 3542500 | - | NZ_CP028271.1 | Mixta intestinalis |
| 51 | 1891500 | 1891712 | - | NZ_CP061280.1 | Mannheimia bovis |
| 52 | 490386 | 490598 | + | NZ_CP028926.1 | Pasteurella multocida |
| 53 | 11811 | 12023 | - | NZ_LT906448.1 | Pasteurella dagmatis |
| 54 | 3996670 | 3996882 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 55 | 116888 | 117100 | + | NZ_LS483470.1 | Leminorella richardii |
| 56 | 4535215 | 4535427 | - | NZ_CP028897.1 | Dongshaea marina |
| 57 | 4294871 | 4295086 | - | NZ_LT615367.1 | Dickeya aquatica |
| 58 | 226387 | 226602 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 59 | 720279 | 720491 | + | NZ_CP011835.1 | Azotobacter chroococcum |
| 60 | 5149308 | 5149523 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 61 | 1880794 | 1881009 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 62 | 1632421 | 1632636 | + | NZ_CP016604.1 | Otariodibacter oris |
| 63 | 3967143 | 3967358 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 64 | 4431176 | 4431391 | - | NZ_CP025799.1 | Dickeya zeae |
| 65 | 2003978 | 2004190 | - | NZ_CP045302.1 | Azotobacter salinestris |
| 66 | 1023216 | 1023428 | - | NC_011852.1 | Glaesserella parasuis SH0165 |
| 67 | 138156 | 138371 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 68 | 4668902 | 4669114 | - | NZ_CP060009.1 | Pseudomonas sediminis |
| 69 | 4489877 | 4490089 | - | NZ_CP013124.1 | Pseudomonas mendocina S5.2 |
| 70 | 2891954 | 2892166 | + | NZ_CP070505.1 | Pseudomonas toyotomiensis |
| 71 | 917816 | 918028 | - | NZ_LT556085.1 | Citrobacter amalonaticus |
| 72 | 4602369 | 4602581 | - | NC_012560.1 | Azotobacter vinelandii DJ |
| 73 | 547742 | 547954 | + | NZ_CP068551.1 | Pseudomonas khazarica |
| 74 | 1090603 | 1090818 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 75 | 752417 | 752629 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 76 | 2084319 | 2084531 | + | NZ_CP053416.1 | Salmonella bongori |
| 77 | 4305776 | 4305988 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 78 | 4142090 | 4142302 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 79 | 36689 | 36901 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 80 | 4233280 | 4233495 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 81 | 229115 | 229330 | + | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 82 | 216863 | 217078 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 83 | 3086304 | 3086519 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 84 | 647644 | 647859 | + | NZ_CP016180.1 | Pasteurella skyensis |
| 85 | 4466787 | 4466999 | - | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 86 | 2684795 | 2685010 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 87 | 5740170 | 5740382 | - | NZ_AP014862.1 | Pseudomonas furukawaii |
| 88 | 406842 | 407054 | + | NZ_CP022272.1 | Shewanella marisflavi |
| 89 | 2761532 | 2761744 | + | NZ_CP036200.1 | Shewanella maritima |
| 90 | 572959 | 573171 | + | NZ_CP037951.1 | Parashewanella tropica |
| 91 | 4579682 | 4579894 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 92 | 3528595 | 3528810 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 93 | 3535597 | 3535809 | + | NC_010554.1 | Proteus mirabilis HI4320 |
| 94 | 21010 | 21225 | - | NZ_CP015031.1 | Basfia succiniciproducens |
| 95 | 416249 | 416464 | - | NC_006300.1 | [Mannheimia] succiniciproducens MBEL55E |
| 96 | 3787059 | 3787274 | + | NZ_CP014864.1 | Microbulbifer thermotolerans |
| 97 | 5616270 | 5616482 | - | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 98 | 3713427 | 3713642 | - | NZ_LR134531.1 | Pragia fontium |
| 99 | 4507861 | 4508076 | - | NZ_LR134201.1 | Cedecea lapagei |
| 100 | 4931802 | 4932017 | - | NZ_CP023525.1 | Cedecea neteri |
| 101 | 2896509 | 2896721 | + | NZ_CP033744.1 | Citrobacter freundii |
| 102 | 51433 | 51645 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 103 | 3064658 | 3064870 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 104 | 4127013 | 4127225 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 105 | 4928632 | 4928844 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 106 | 431296 | 431508 | + | NC_009092.1 | Shewanella loihica PV-4 |
| 107 | 5151962 | 5152177 | - | NZ_CP041247.1 | Raoultella electrica |
| 108 | 1859641 | 1859856 | + | NZ_CP026047.1 | Raoultella planticola |
| 109 | 5450138 | 5450353 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 110 | 5276865 | 5277077 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 111 | 4096089 | 4096301 | + | NZ_AP014857.1 | Escherichia albertii |
| 112 | 2838890 | 2839102 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 113 | 263337 | 263552 | + | NZ_CP029185.2 | Limnobaculum parvum |
| 114 | 4016560 | 4016772 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 115 | 4916556 | 4916771 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 116 | 3997359 | 3997571 | - | NC_007954.1 | Shewanella denitrificans OS217 |
| 117 | 1590114 | 1590329 | - | NZ_CP011254.1 | Serratia fonticola |
| 118 | 3857853 | 3858068 | - | NZ_CP015749.1 | Pectobacterium parmentieri |
| 119 | 1470684 | 1470899 | - | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 120 | 6036765 | 6036980 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 121 | 2184652 | 2184864 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 122 | 89139 | 89351 | + | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 123 | 474422 | 474634 | + | NZ_CP069213.1 | Shewanella litorisediminis |
| 124 | 552877 | 553089 | + | NC_008700.1 | Shewanella amazonensis SB2B |
| 125 | 1657821 | 1658033 | + | NZ_CP026364.1 | Proteus hauseri |
| 126 | 4733452 | 4733664 | + | NZ_CP020373.1 | Shewanella khirikhana |
| 127 | 5654999 | 5655211 | - | NZ_AP022642.1 | Pseudomonas otitidis |
| 128 | 5872614 | 5872829 | - | NZ_CP048878.1 | Spartinivicinus ruber |
| 129 | 154666 | 154878 | + | NZ_LR134340.1 | Escherichia marmotae |
| 130 | 3607460 | 3607672 | - | NZ_CP031416.1 | Gallaecimonas mangrovi |
| 131 | 3206307 | 3206522 | - | NZ_CP038469.1 | Citrobacter tructae |
| 132 | 1567292 | 1567504 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 133 | 4551088 | 4551303 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 134 | 178466 | 178681 | + | NZ_CP029347.1 | Saliniradius amylolyticus |
| 135 | 3258108 | 3258320 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 136 | 105067 | 105279 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 137 | 3030141 | 3030353 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 138 | 5449939 | 5450151 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 139 | 206311 | 206526 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 140 | 4229829 | 4230041 | - | NZ_CP015581.1 | Tatumella citrea |
| 141 | 5471228 | 5471443 | - | NZ_CP050508.1 | Raoultella terrigena |
| 142 | 6030750 | 6030965 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 143 | 4103966 | 4104181 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 144 | 2846651 | 2846857 | - | NZ_AP018724.1 | Sulfurivermis fontis |
| 145 | 480822 | 481043 | + | NC_017506.1 | Marinobacter adhaerens HP15 |
| 146 | 5407599 | 5407811 | - | NZ_CP054254.1 | Klebsiella variicola |
| 147 | 4675953 | 4676168 | - | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 148 | 774826 | 775041 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 149 | 802813 | 803037 | + | NZ_CP011494.1 | Marinobacter psychrophilus |
| 150 | 77846 | 78061 | - | NZ_CP048833.1 | Pseudomonas multiresinivorans |
| 151 | 2567793 | 2568008 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 152 | 338998 | 339210 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 153 | 4453293 | 4453505 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 154 | 3203329 | 3203544 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 155 | 4578487 | 4578702 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 156 | 4985294 | 4985506 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 157 | 356507 | 356713 | + | NC_014315.1 | Nitrosococcus watsonii C-113 |
| 158 | 268174 | 268380 | + | NC_007484.1 | Nitrosococcus oceani ATCC 19707 |
| 159 | 204634 | 204849 | + | NZ_CP034938.1 | Pectobacterium odoriferum |
| 160 | 4386051 | 4386266 | - | NZ_LR215729.2 | Pseudomonas marincola |
| 161 | 71222 | 71434 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
| 162 | 1366988 | 1367200 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 163 | 175953 | 176168 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 164 | 1828735 | 1828950 | + | NZ_CP047495.1 | Pectobacterium brasiliense |
| 165 | 204326 | 204541 | + | NZ_CP051652.1 | Pectobacterium carotovorum |
| 166 | 4412759 | 4412971 | - | NZ_CP046378.1 | Shewanella algae |
| 167 | 216781 | 216996 | + | NZ_CP065044.1 | Pectobacterium aroidearum |
| 168 | 3487886 | 3488101 | - | NZ_CP017482.1 | Pectobacterium polaris |
| 169 | 651634 | 651849 | + | NZ_CP014158.1 | Pseudomonas citronellolis |
| 170 | 3218244 | 3218459 | - | NZ_CP060401.1 | Xenorhabdus nematophila |
| 171 | 128135 | 128347 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 172 | 118118 | 118330 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 173 | 555687 | 555902 | + | NZ_CP047698.1 | Pseudomonas knackmussii |
| 174 | 527871 | 528083 | + | NZ_CP022358.1 | Shewanella bicestrii |
| 175 | 4406599 | 4406814 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 176 | 3500684 | 3500896 | - | NZ_CP067057.1 | Rahnella aceris |
| 177 | 1046546 | 1046758 | - | NZ_CP014056.2 | Grimontia hollisae |
| 178 | 5567910 | 5568125 | - | NZ_CP022562.1 | Pseudomonas monteilii |
| 179 | 4597037 | 4597249 | - | NC_003910.7 | Colwellia psychrerythraea 34H |
| 180 | 945099 | 945305 | + | NZ_CP038033.1 | Nitrosococcus wardiae |
| 181 | 5115308 | 5115520 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 182 | 90230 | 90442 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 183 | 1807025 | 1807237 | + | NZ_CP023706.1 | Edwardsiella tarda |
| 184 | 5539633 | 5539848 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 185 | 3343984 | 3344196 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 186 | 4452941 | 4453153 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 187 | 2938466 | 2938678 | - | NZ_CP072844.1 | Psychrosphaera aestuarii |
| 188 | 566566 | 566778 | + | NC_016901.1 | Shewanella baltica OS678 |
| 189 | 3005593 | 3005808 | + | NZ_CP009787.1 | Yersinia rohdei |
| 190 | 3684484 | 3684696 | + | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 191 | 1629142 | 1629354 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 192 | 3016206 | 3016421 | + | NZ_CP049115.1 | Pantoea stewartii |
| 193 | 4560482 | 4560694 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 194 | 5687105 | 5687320 | - | NC_002516.2 | Pseudomonas aeruginosa PAO1 |
| 195 | 2139568 | 2139783 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 196 | 2587377 | 2587589 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 197 | 4494537 | 4494749 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 198 | 4593897 | 4594109 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 199 | 4602006 | 4602218 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 200 | 2713244 | 2713456 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 201 | 4713520 | 4713732 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 202 | 3105878 | 3106090 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 203 | 3726117 | 3726329 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 204 | 4957873 | 4958085 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 205 | 171727 | 171942 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 206 | 140276 | 140488 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 207 | 3836086 | 3836298 | - | NZ_CP023567.1 | Erwinia pyrifoliae |
| 208 | 115740 | 115955 | + | NZ_CP043727.1 | Yersinia canariae |
| 209 | 4459951 | 4460166 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 210 | 1742319 | 1742534 | + | NZ_CP007230.1 | Yersinia similis |
| 211 | 585580 | 585789 | - | NC_004545.1 | Buchnera aphidicola str. Bp (Baizongia pistaciae) |
| 212 | 1146946 | 1147161 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 213 | 4144704 | 4144919 | - | NZ_CP048796.1 | Providencia vermicola |
| 214 | 926989 | 927204 | + | NZ_CP029736.1 | Providencia rettgeri |
| 215 | 3611188 | 3611403 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 216 | 198453 | 198668 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 217 | 1098557 | 1098775 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 218 | 4568043 | 4568258 | - | NZ_CP046293.1 | Yersinia intermedia |
| 219 | 4150469 | 4150684 | - | NZ_LS483422.1 | Providencia heimbachae |
| 220 | 118134 | 118349 | + | NZ_CP032487.1 | Yersinia hibernica |
| 221 | 3312120 | 3312335 | - | NZ_CP031146.1 | Pseudomonas plecoglossicida |
| 222 | 4016044 | 4016250 | - | NC_013960.1 | Nitrosococcus halophilus Nc 4 |
| 223 | 156370 | 156582 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 224 | 4660823 | 4661035 | - | NC_015968.1 | Enterobacter soli |
| 225 | 175910 | 176125 | + | NZ_CP034148.1 | Pantoea agglomerans |
| 226 | 197114 | 197329 | + | NZ_CP038853.1 | Pantoea vagans |
| 227 | 5842712 | 5842927 | - | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 228 | 1548735 | 1548947 | - | NZ_CP060092.1 | Teredinibacter purpureus |
| 229 | 511833 | 512048 | - | NC_016893.1 | Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) |
| 230 | 1553490 | 1553693 | + | NC_002967.9 | Treponema denticola ATCC 35405 |
| 231 | 900290 | 900502 | + | NZ_CP014143.1 | Microbulbifer aggregans |
| 232 | 110783 | 110998 | + | NZ_CP050150.1 | Hafnia alvei |
| 233 | 542021 | 542233 | + | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 234 | 184405 | 184620 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 235 | 2970934 | 2971152 | + | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 236 | 2411565 | 2411777 | + | NZ_CP011451.1 | Nitrosomonas communis |
| 237 | 446420 | 446635 | + | NZ_CP071706.1 | Pseudomonas donghuensis |
| 238 | 203699 | 203914 | - | NZ_CP009056.1 | Frischella perrara |
| 239 | 3443579 | 3443806 | - | NZ_LN614827.1 | Legionella fallonii LLAP-10 |
| 240 | 2428522 | 2428725 | - | NZ_CP009228.1 | Treponema putidum |
| 241 | 2437744 | 2437947 | + | NC_022097.1 | Treponema pedis str. T A4 |
| 242 | 3370789 | 3370992 | - | NZ_AP021884.1 | Sulfuriferula plumbiphila |
| 243 | 781775 | 781978 | - | NZ_AP022853.1 | Sulfurimicrobium lacus |
| 244 | 150313 | 150513 | - | NZ_HF545617.1 | Ruminococcus bicirculans |
| 245 | 5361279 | 5361494 | - | NZ_CP024159.1 | Pseudomonas mosselii |
| 246 | 336936 | 337151 | + | NC_008027.1 | Pseudomonas entomophila L48 |
| 247 | 512083 | 512301 | + | NZ_CP016397.1 | Legionella clemsonensis |
| 248 | 152346 | 152558 | - | NZ_CP047491.1 | Microbulbifer hydrolyticus |
| 249 | 707906 | 708133 | + | NZ_CP013742.1 | Legionella pneumophila |
| 250 | 570252 | 570464 | - | NZ_CP036536.1 | Salinimonas lutimaris |
| 251 | 4536786 | 4537001 | - | NZ_CP009365.1 | Pseudomonas soli |
| 252 | 2485972 | 2486178 | - | NC_015500.1 | Treponema brennaborense DSM 12168 |
| 253 | 457385 | 457621 | + | NZ_LR699114.1 | Aquicella lusitana |
| 254 | 2445974 | 2446189 | - | NZ_CP007445.1 | Gilliamella apicola |
| 255 | 2514805 | 2515035 | - | NZ_CP038254.1 | Legionella israelensis |
| 256 | 3996907 | 3997131 | - | NZ_CP016268.1 | Woeseia oceani |
| 257 | 4093548 | 4093760 | + | NZ_CP019650.1 | Microbulbifer agarilyticus |
| 258 | 507652 | 507870 | + | NC_010995.1 | Cellvibrio japonicus Ueda107 |
| 259 | 1412415 | 1412621 | + | NZ_CP011502.1 | Aeromicrobium erythreum |
| 260 | 4236727 | 4236948 | - | NC_011146.1 | Citrifermentans bemidjiense Bem |
| 261 | 2558640 | 2558843 | + | NC_016048.1 | Oscillibacter valericigenes Sjm18-20 |
| 262 | 1202432 | 1202641 | + | NZ_CP031518.1 | Treponema ruminis |
| 263 | 2008319 | 2008555 | - | NZ_LR699119.1 | Aquicella siphonis |
| 264 | 2792963 | 2793169 | + | NZ_CP014671.1 | Immundisolibacter cernigliae |
| 265 | 3326057 | 3326269 | + | NZ_CP017689.1 | Thalassotalea crassostreae |
| 266 | 704474 | 704689 | - | NZ_CP048812.1 | Halomonas socia |
| 267 | 2367280 | 2367498 | + | NZ_CP035688.1 | Vibrio metoecus |
| 268 | 2708086 | 2708304 | + | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 269 | 3132556 | 3132771 | - | NZ_CP014226.1 | Halomonas chromatireducens |
| 270 | 3250003 | 3250215 | - | NC_014532.2 | Halomonas elongata DSM 2581 |
| 271 | 1164014 | 1164214 | + | NZ_CP025286.1 | Ethanoligenens harbinense YUAN-3 |
| 272 | 828898 | 829110 | + | NZ_AP018933.1 | Zymobacter palmae |
| 273 | 670114 | 670326 | + | NZ_CP013106.1 | Halomonas huangheensis |
| 274 | 2942565 | 2942777 | - | NZ_LN681225.1 | Legionella hackeliae |
| 275 | 675179 | 675385 | - | NC_020291.1 | Clostridium saccharoperbutylacetonicum N1-4(HMT) |
| 276 | 798248 | 798454 | + | NZ_AP019004.1 | Phascolarctobacterium faecium |
| 277 | 1837805 | 1838017 | + | NZ_CP028103.1 | Fusobacterium varium ATCC 27725 |
| 278 | 3374496 | 3374708 | - | NZ_CP021435.1 | Halomonas beimenensis |
| 279 | 632843 | 633055 | - | NZ_CP028105.1 | Fusobacterium ulcerans |
| 280 | 8834031 | 8834240 | + | NZ_CP035758.1 | Ktedonosporobacter rubrisoli |
| 281 | 2117867 | 2118070 | - | NC_014330.1 | Brachyspira pilosicoli 95/1000 |
| 282 | 2009634 | 2009861 | + | NC_013441.1 | Gordonia bronchialis DSM 43247 |
| 283 | 358610 | 358837 | - | NC_007512.1 | Pelodictyon luteolum DSM 273 |
| 284 | 1259753 | 1259956 | + | NZ_CP046932.1 | Brachyspira hyodysenteriae |
| 285 | 620814 | 621017 | - | NC_017243.1 | Brachyspira intermedia PWS/A |
| 286 | 2177255 | 2177458 | + | NC_014150.1 | Brachyspira murdochii DSM 12563 |
| 287 | 2530147 | 2530350 | - | NZ_CP019914.1 | Brachyspira hampsonii |
| 288 | 608862 | 609074 | + | NZ_CP022544.1 | Bifidobacterium pseudolongum |
| 289 | 409802 | 410014 | + | NZ_CP070228.1 | Arcanobacterium phocisimile |
| 290 | 423217 | 423444 | - | NC_010803.1 | Chlorobium limicola DSM 245 |
| 291 | 2488333 | 2488560 | + | NC_011060.1 | Pelodictyon phaeoclathratiforme BU-1 |
| 292 | 2439269 | 2439472 | + | NZ_CP016786.1 | Clostridium isatidis |
| 293 | 2233108 | 2233317 | + | NC_008593.1 | Clostridium novyi NT |
| 294 | 2213388 | 2213594 | - | NZ_CP023671.1 | Clostridium septicum |
| 295 | 3123196 | 3123411 | - | NZ_CP048602.1 | Halomonas piezotolerans |
| 296 | 1431373 | 1431576 | - | NC_015436.1 | Sphaerochaeta coccoides DSM 17374 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP006569.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF17764.3 | 0.75 | 220 | 217 | opposite-strand | 3'DNA-binding domain (3'BD) |
| 2 | PF18074.3 | 0.74 | 219 | 217.0 | opposite-strand | Primosomal protein N C-terminal domain |
| 3 | PF00270.31 | 0.77 | 226 | 217 | opposite-strand | DEAD/DEAH box helicase |
| 4 | PF04851.17 | 0.76 | 223 | 217.0 | opposite-strand | Type III restriction enzyme, res subunit |
| 5 | PF18319.3 | 0.74 | 219 | 217.0 | opposite-strand | PriA DNA helicase Cys-rich region (CRR) domain |
| 6 | PF05036.15 | 0.71 | 209 | 3841.0 | opposite-strand | SPOR domain |
| 7 | PF00227.28 | 0.63 | 187 | 4802.5 | opposite-strand | Proteasome subunit |
| 8 | PF07724.16 | 0.6 | 178 | 5344 | opposite-strand | AAA domain (Cdc48 subfamily) |
++ More..