Result : Q3MGJ7

Protein Information

• Protein name: Exodeoxyribonuclease 7 small subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII small subunit) (Exonuclease VII small subunit)
• NCBI Accession ID: CP000117.1
• Organism: Trichormus variabilis (strain ATCC 29413 / PCC 7937) (Anabaena variabilis)
• Left: 336783
• Right: 337067
• Strand: +
• Nucleotide Sequence: ATGGTTAAACGTAAAAACTCTGACAATTCAGGTACTGTGGCACAGGGTAATTATGAAGCCAAGGTTGCAGAAATAGAAGCCATCATCTCACGGATTGAATCAGGAGAATTGGAACTAGAAACCGTTTTTGAGCAGTTTGCCAACGCCGTTCAATACCTGCGTCAATGCGACACTTTTTTACAGCAACGACAGCAACAAATAGATTTATTAATTGAAACTTTGAATGAGCAAGACGGTGATCAGATACCCAGGGTCTCCAATGATGGTATTGAGCCAAAGAAATGA
• Sequence: MVKRKNSDNSGTVAQGNYEAKVAEIEAIISRIESGELELETVFEQFANAVQYLRQCDTFLQQRQQQIDLLIETLNEQDGDQIPRVSNDGIEPKK
• Source of smORF: Swiss-Prot
• Function: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides. {ECO:0000255|HAMAP-Rule:MF_00337}.
• Pubmed ID: 25197444
• Domain: CDD:412547
• Functional Category: Others
• Uniprot ID: Q3MGJ7
• ORF Length (Amino Acid): 94

Conservation Analysis

No. of Species: 2

Sr.No.	Left Position	Right Position	Strand	NCBI Accession id	Species Name
1	1629298	1629582	+	NZ_CP047242.1	Trichormus variabilis 0441
2	95182	95415	-	NC_019689.1	Pleurocapsa sp. PCC 7327

Neighborhood Conservation Analysis

^* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
^* 'Small ORF' represents the entry/query analyzed.
^* Image generated using 'gggenes'(R-Package).

Neighborhood Representative Chosen(Species): NZ_CP047242.1

Sr.No.	Domain	Co-occurrence Frequency	No. of species in which domain occurs with smORF	Median distance b/w smORF and domain bearing ORFs	Orientation relative to smORF	PFAM Information
1	PF13742.8	1.0	2	6.0	same-strand	OB-fold nucleic acid binding domain
2	PF01336.27	1.0	2	6.0	same-strand	OB-fold nucleic acid binding domain