Result : Q3KJK8
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Probable mRNA interferase HicA (EC 3.1.-.-) (Endoribonuclease HicA) (Toxin HicA) |
| NCBI Accession ID | |
| Organism | Pseudomonas fluorescens (strain Pf0-1) |
| Left | |
| Right | |
| Strand | |
| Nucleotide Sequence | |
| Sequence | MKYSEFRRWLKAQGVEFQTGKGSHFKVSLNGKSTVFPDHGAKEMGEGLRKSIVKQLGLKD |
| Source of smORF | Swiss-Prot |
| Function | Toxic component of a type II toxin-antitoxin (TA) system. A probable translation-independent mRNA interferase (By similarity). {ECO:0000250}. |
| Pubmed ID | 19432983 |
| Domain | CDD:412549 |
| Functional Category | RNA-binding_and_Toxin_type_2 |
| Uniprot ID | Q3KJK8 |
| ORF Length (Amino Acid) | 60 |
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| Conservation Analysis |
No. of Species: 53
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 5445064 | 5445246 | + | NZ_CP014205.2 | Pseudomonas glycinae |
| 2 | 5642730 | 5642912 | - | NZ_CP067022.1 | Pseudomonas cannabina pv. alisalensis |
| 3 | 5773177 | 5773359 | - | NZ_CP042804.1 | Pseudomonas amygdali pv. tabaci str. ATCC 11528 |
| 4 | 1502776 | 1502955 | - | NZ_CP043420.1 | Kushneria phosphatilytica |
| 5 | 4773 | 4955 | + | NZ_CP062157.2 | Pseudomonas lundensis |
| 6 | 1729415 | 1729606 | - | NZ_CP011835.1 | Azotobacter chroococcum |
| 7 | 4596417 | 4596608 | - | NZ_CP045302.1 | Azotobacter salinestris |
| 8 | 3557712 | 3557894 | - | NZ_CP009365.1 | Pseudomonas soli |
| 9 | 4418768 | 4418947 | + | NZ_CP056030.1 | Pseudomonas eucalypticola |
| 10 | 4067117 | 4067302 | - | NZ_CP011253.3 | Pandoraea oxalativorans |
| 11 | 1303083 | 1303268 | + | NZ_LT906435.1 | Pandoraea sputorum |
| 12 | 1053283 | 1053468 | - | NZ_CP010310.2 | Pandoraea pulmonicola |
| 13 | 229834 | 230016 | + | NC_012962.1 | Photorhabdus asymbiotica |
| 14 | 421935 | 422117 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 15 | 3080011 | 3080193 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 16 | 4669625 | 4669807 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 17 | 422140 | 422322 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 18 | 3319365 | 3319547 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 19 | 3062078 | 3062260 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 20 | 2604821 | 2605000 | - | NC_018012.1 | Thiocystis violascens DSM 198 |
| 21 | 1385635 | 1385811 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 22 | 4262147 | 4262326 | + | NZ_CP016172.1 | Bordetella flabilis |
| 23 | 2627383 | 2627559 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 24 | 2098726 | 2098902 | + | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 25 | 1705137 | 1705319 | + | NZ_CP060414.1 | Neisseria musculi |
| 26 | 1666690 | 1666872 | + | NZ_CP060414.1 | Neisseria musculi |
| 27 | 1164257 | 1164439 | - | NZ_CP060414.1 | Neisseria musculi |
| 28 | 1684713 | 1684889 | + | NZ_CP060414.1 | Neisseria musculi |
| 29 | 3712361 | 3712540 | + | NZ_CP041970.1 | Acinetobacter dispersus |
| 30 | 597320 | 597502 | + | NC_011852.1 | Glaesserella parasuis SH0165 |
| 31 | 2167319 | 2167501 | - | NZ_CP038853.1 | Pantoea vagans |
| 32 | 3758882 | 3759061 | + | NZ_CP017480.1 | Luteibacter rhizovicinus DSM 16549 |
| 33 | 1395165 | 1395341 | + | NZ_CP043727.1 | Yersinia canariae |
| 34 | 5086812 | 5086988 | + | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 35 | 4087142 | 4087315 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 36 | 1891612 | 1891794 | + | NZ_CP034148.1 | Pantoea agglomerans |
| 37 | 493544 | 493723 | + | NZ_CP030086.1 | Polynucleobacter paneuropaeus |
| 38 | 3489476 | 3489652 | + | NZ_CP007230.1 | Yersinia similis |
| 39 | 2649875 | 2650051 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 40 | 2120888 | 2121064 | + | NC_010622.1 | Paraburkholderia phymatum STM815 |
| 41 | 2709182 | 2709361 | - | NZ_CP024632.1 | Acinetobacter junii |
| 42 | 1845540 | 1845719 | - | NZ_AP012547.1 | Sulfuritalea hydrogenivorans sk43H |
| 43 | 2930171 | 2930344 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 44 | 3887259 | 3887432 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 45 | 3352109 | 3352285 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 46 | 1290345 | 1290518 | + | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 47 | 2217010 | 2217192 | + | NZ_CP047165.1 | Pelistega ratti |
| 48 | 2686863 | 2687039 | + | NZ_CP039288.1 | Cupriavidus necator H16 |
| 49 | 307310 | 307489 | + | NZ_CP023276.1 | Polynucleobacter difficilis |
| 50 | 1124184 | 1124360 | + | NZ_CP024941.1 | Paraburkholderia terricola |
| 51 | 1686932 | 1687108 | - | NZ_CP028271.1 | Mixta intestinalis |
| 52 | 3322843 | 3323016 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 53 | 2692857 | 2693033 | - | NZ_CP031124.1 | Ephemeroptericola cinctiostellae |
| 54 | 1172060 | 1172236 | - | NZ_CP054626.1 | Cupriavidus gilardii |
| 55 | 1509286 | 1509462 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 56 | 2025186 | 2025362 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 57 | 4300376 | 4300552 | + | NZ_CP022989.1 | Paraburkholderia aromaticivorans |
| 58 | 2693516 | 2693692 | - | NZ_CP030848.1 | Sphingobacterium hotanense |
| 59 | 4971110 | 4971271 | + | NZ_CP068034.2 | Pseudomonas syringae |
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