Result : Q3JDR7
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Cell division topological specificity factor |
| NCBI Accession ID | CP000127.1 |
| Organism | Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / NCIMB 11848 / C-107) |
| Left | 547311 |
| Right | 547601 |
| Strand | - |
| Nucleotide Sequence | ATGAGTTGGTTCAATTATTTCAGAGCAACAAGGGGAAATTCAGCTCGCACTGCCAAAGAACGATTGCAGATCGTGATTGCTCATGAGCGGATAGATCGCTCTGGCCCTTCTTATCTGCCCAGATTACGGGGAGATATTATTGAAGTTATCCGCAAATATATAGAAATTGATGAAGACCAGGTCAAAATTCAAATGGAACAAGAAGGCGATATGGACGTGCTCGCCTTGAATATTCAACTGCCCGATGCCTCTCCCCCGCTGTCCGAAACCCGTCATTCTTCCAAGCAATAA |
| Sequence | MSWFNYFRATRGNSARTAKERLQIVIAHERIDRSGPSYLPRLRGDIIEVIRKYIEIDEDQVKIQMEQEGDMDVLALNIQLPDASPPLSETRHSSKQ |
| Source of smORF | Swiss-Prot |
| Function | Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. {ECO:0000255|HAMAP-Rule:MF_00262}. |
| Pubmed ID | 16957257 |
| Domain | CDD:412433 |
| Functional Category | Others |
| Uniprot ID | Q3JDR7 |
| ORF Length (Amino Acid) | 96 |
++ More..
| Conservation Analysis |
No. of Species: 125
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 547311 | 547601 | - | NC_007484.1 | Nitrosococcus oceani ATCC 19707 |
| 2 | 2766018 | 2766308 | + | NC_014315.1 | Nitrosococcus watsonii C-113 |
| 3 | 877070 | 877357 | - | NZ_CP038033.1 | Nitrosococcus wardiae |
| 4 | 4045773 | 4046078 | + | NC_013960.1 | Nitrosococcus halophilus Nc 4 |
| 5 | 2056331 | 2056588 | - | NC_011901.1 | Thioalkalivibrio sulfidiphilus HL-EbGr7 |
| 6 | 3276533 | 3276793 | - | NC_014972.1 | Desulfobulbus propionicus DSM 2032 |
| 7 | 982815 | 983069 | - | NZ_CP031093.1 | Hydrocarboniclastica marina |
| 8 | 3663891 | 3664142 | + | NZ_CP014544.1 | Zhongshania aliphaticivorans |
| 9 | 2045399 | 2045653 | - | NZ_CP007029.1 | Thioalkalivibrio paradoxus ARh 1 |
| 10 | 782505 | 782762 | - | NZ_CP011040.1 | Pseudoalteromonas spongiae UST010723-006 |
| 11 | 1878010 | 1878273 | - | NZ_CP072793.1 | Thiothrix unzii |
| 12 | 583554 | 583820 | - | NZ_CP072135.1 | Pseudoalteromonas xiamenensis |
| 13 | 982614 | 982877 | - | NZ_CP013188.1 | Pseudoalteromonas phenolica |
| 14 | 855822 | 856076 | + | NZ_CP043929.1 | Methylomonas rhizoryzae |
| 15 | 882537 | 882794 | + | NZ_CP009889.1 | Pseudoalteromonas piratica |
| 16 | 394442 | 394705 | + | NZ_CP072426.1 | Pseudoalteromonas viridis |
| 17 | 2020668 | 2020961 | + | NZ_CP012621.1 | Zobellella denitrificans |
| 18 | 571583 | 571849 | - | NC_007482.1 | Pseudoalteromonas translucida |
| 19 | 1727511 | 1727810 | + | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 20 | 614880 | 615146 | - | NZ_CP011037.1 | Pseudoalteromonas nigrifaciens |
| 21 | 1385223 | 1385477 | + | NC_019902.2 | Thioalkalivibrio nitratireducens DSM 14787 |
| 22 | 1300564 | 1300818 | - | NC_021291.1 | Spiribacter salinus M19-40 |
| 23 | 219816 | 220097 | + | NZ_AP014936.1 | Sulfurifustis variabilis |
| 24 | 3632430 | 3632684 | + | NC_002516.2 | Pseudomonas aeruginosa PAO1 |
| 25 | 2053538 | 2053795 | - | NZ_CP011367.1 | Thioalkalivibrio versutus |
| 26 | 1558711 | 1558965 | - | NZ_CP014476.1 | Methylomonas denitrificans |
| 27 | 1035229 | 1035489 | + | NZ_CP041783.1 | Shewanella donghaensis |
| 28 | 1351878 | 1352132 | - | NZ_AP014862.1 | Pseudomonas furukawaii |
| 29 | 2715901 | 2716176 | - | NZ_CP012373.2 | Beggiatoa leptomitoformis |
| 30 | 1443600 | 1443851 | - | NZ_CP056030.1 | Pseudomonas eucalypticola |
| 31 | 714221 | 714484 | - | NZ_CP011029.1 | Pseudoalteromonas espejiana DSM 9414 |
| 32 | 572335 | 572598 | - | NZ_CP033066.1 | Pseudoalteromonas agarivorans |
| 33 | 2716139 | 2716399 | + | NZ_CP020472.1 | Shewanella japonica |
| 34 | 647321 | 647569 | + | NZ_CP045871.1 | Litoricola lipolytica |
| 35 | 2315444 | 2315698 | - | NZ_CP048833.1 | Pseudomonas multiresinivorans |
| 36 | 5086028 | 5086282 | + | NZ_CP014158.1 | Pseudomonas citronellolis |
| 37 | 302146 | 302409 | - | NZ_CP019628.1 | Pseudoalteromonas aliena |
| 38 | 941805 | 942059 | - | NZ_CP012676.1 | Pseudomonas versuta |
| 39 | 718100 | 718363 | - | NZ_CP011026.1 | Pseudoalteromonas arctica A 37-1-2 |
| 40 | 764458 | 764721 | - | NZ_CP031962.1 | Pseudoalteromonas tunicata |
| 41 | 3134806 | 3135117 | + | NZ_CP054599.1 | Sulfitobacter pseudonitzschiae |
| 42 | 714107 | 714391 | - | NZ_CP021376.1 | Oceanisphaera avium |
| 43 | 1746548 | 1746817 | + | NZ_CP029822.1 | Entomomonas moraniae |
| 44 | 659827 | 660090 | - | NZ_CP011031.1 | Pseudoalteromonas issachenkonii |
| 45 | 660107 | 660370 | - | NZ_CP011042.1 | Pseudoalteromonas tetraodonis |
| 46 | 2281291 | 2281560 | - | NZ_AP022188.1 | Aeromonas media |
| 47 | 1420753 | 1421016 | - | NZ_CP040449.1 | Aeromonas simiae |
| 48 | 2281758 | 2282015 | + | NZ_CP069213.1 | Shewanella litorisediminis |
| 49 | 1864423 | 1864680 | + | NZ_CP020373.1 | Shewanella khirikhana |
| 50 | 1268749 | 1269003 | - | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 51 | 1948601 | 1948861 | - | NZ_CP041036.1 | Shewanella polaris |
| 52 | 3031097 | 3031357 | + | NZ_CP034015.1 | Shewanella livingstonensis |
| 53 | 2043323 | 2043583 | - | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 54 | 3106125 | 3106379 | + | NZ_CP011835.1 | Azotobacter chroococcum |
| 55 | 1068368 | 1068622 | - | NZ_CP009533.1 | Pseudomonas rhizosphaerae |
| 56 | 2411163 | 2411417 | - | NZ_CP049044.1 | Pseudomonas psychrophila |
| 57 | 2286503 | 2286763 | - | NZ_CP046378.1 | Shewanella algae |
| 58 | 4286495 | 4286749 | + | NZ_CP047698.1 | Pseudomonas knackmussii |
| 59 | 4239952 | 4240206 | - | NZ_CP045302.1 | Azotobacter salinestris |
| 60 | 1870231 | 1870485 | - | NZ_CP068034.2 | Pseudomonas syringae |
| 61 | 192822 | 193085 | - | NZ_CP032091.1 | Pseudoalteromonas donghaensis |
| 62 | 1549860 | 1550114 | - | NZ_CP046621.1 | Pseudomonas alkylphenolica |
| 63 | 4297282 | 4297536 | + | NZ_CP071706.1 | Pseudomonas donghuensis |
| 64 | 3586930 | 3587184 | + | NC_012560.1 | Azotobacter vinelandii DJ |
| 65 | 2545171 | 2545431 | + | NC_009092.1 | Shewanella loihica PV-4 |
| 66 | 50754 | 51041 | + | NZ_CP021377.1 | Oceanisphaera profunda |
| 67 | 2972006 | 2972275 | - | NC_018012.1 | Thiocystis violascens DSM 198 |
| 68 | 4462284 | 4462538 | + | NZ_AP022642.1 | Pseudomonas otitidis |
| 69 | 2359143 | 2359400 | + | NC_008700.1 | Shewanella amazonensis SB2B |
| 70 | 1125398 | 1125664 | - | NZ_CP051883.1 | Aeromonas salmonicida |
| 71 | 4722723 | 4722977 | + | NZ_CP051487.1 | Pseudomonas umsongensis |
| 72 | 5875822 | 5876076 | - | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 73 | 5041953 | 5042207 | + | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 74 | 3778821 | 3779105 | + | NZ_AP017928.1 | Methylocaldum marinum |
| 75 | 743353 | 743619 | - | NZ_CP044060.1 | Aeromonas veronii |
| 76 | 912491 | 912757 | - | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 77 | 1916909 | 1917163 | - | NZ_CP067022.1 | Pseudomonas cannabina pv. alisalensis |
| 78 | 4386304 | 4386558 | + | NC_004578.1 | Pseudomonas syringae pv. tomato str. DC3000 |
| 79 | 1894255 | 1894509 | + | NZ_CP014262.1 | Pseudomonas corrugata |
| 80 | 1993739 | 1993993 | - | NZ_CP029608.1 | Pseudomonas kribbensis |
| 81 | 1144623 | 1144877 | + | NZ_CP014205.2 | Pseudomonas glycinae |
| 82 | 1960183 | 1960437 | - | NZ_CP062253.1 | Pseudomonas gozinkensis |
| 83 | 3403842 | 3404096 | + | NZ_CP009365.1 | Pseudomonas soli |
| 84 | 4893969 | 4894223 | + | NZ_CP035088.1 | Pseudomonas viciae |
| 85 | 5910427 | 5910681 | - | NZ_CP048810.1 | Pseudomonas bijieensis |
| 86 | 5009724 | 5009978 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 87 | 2618446 | 2618712 | + | NZ_CP050851.1 | Aeromonas hydrophila |
| 88 | 1900896 | 1901153 | - | NZ_CP022272.1 | Shewanella marisflavi |
| 89 | 2139475 | 2139738 | - | NZ_CP028897.1 | Dongshaea marina |
| 90 | 1930405 | 1930668 | + | NZ_LN614827.1 | Legionella fallonii LLAP-10 |
| 91 | 1364644 | 1364907 | - | NZ_CP031416.1 | Gallaecimonas mangrovi |
| 92 | 3058036 | 3058290 | - | NZ_CP015839.1 | Marinobacterium aestuarii |
| 93 | 1700870 | 1701124 | - | NZ_CP014870.1 | Pseudomonas silesiensis |
| 94 | 1985453 | 1985716 | + | NZ_LN614830.1 | Tatlockia micdadei |
| 95 | 1806859 | 1807113 | - | NZ_CP042804.1 | Pseudomonas amygdali pv. tabaci str. ATCC 11528 |
| 96 | 2012781 | 2013044 | + | NZ_LT906442.1 | Legionella waltersii |
| 97 | 1751328 | 1751591 | + | NZ_CP038254.1 | Legionella israelensis |
| 98 | 1386326 | 1386589 | - | NZ_LT906451.1 | Legionella lansingensis |
| 99 | 2119629 | 2119883 | + | NZ_CP031146.1 | Pseudomonas plecoglossicida |
| 100 | 1457302 | 1457556 | - | NZ_CP022562.1 | Pseudomonas monteilii |
| 101 | 4603933 | 4604187 | + | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 102 | 1001025 | 1001288 | - | NZ_CP071325.1 | Photobacterium ganghwense |
| 103 | 2254661 | 2254909 | - | NZ_CP048878.1 | Spartinivicinus ruber |
| 104 | 2989255 | 2989515 | + | NC_009901.1 | Shewanella pealeana ATCC 700345 |
| 105 | 1759460 | 1759723 | + | NZ_CP016397.1 | Legionella clemsonensis |
| 106 | 1472658 | 1472921 | - | NZ_LN681225.1 | Legionella hackeliae |
| 107 | 3185230 | 3185481 | - | NZ_CP031769.1 | Salinimonas sediminis |
| 108 | 2635903 | 2636166 | + | NC_013861.1 | Legionella longbeachae NSW150 |
| 109 | 2262599 | 2262862 | + | NZ_CP025491.2 | Legionella sainthelensi |
| 110 | 3091384 | 3091644 | + | NC_020888.1 | Thalassolituus oleivorans MIL-1 |
| 111 | 3367260 | 3367511 | + | NZ_CP052766.1 | Alteromonas pelagimontana |
| 112 | 1455812 | 1456075 | - | NZ_CP044399.1 | Moritella marina ATCC 15381 |
| 113 | 1233305 | 1233559 | + | NZ_CP036536.1 | Salinimonas lutimaris |
| 114 | 4247878 | 4248138 | + | NZ_CP007039.1 | Pseudomonas cichorii JBC1 |
| 115 | 1539084 | 1539341 | + | NC_010995.1 | Cellvibrio japonicus Ueda107 |
| 116 | 1934116 | 1934385 | + | NZ_CP013742.1 | Legionella pneumophila |
| 117 | 40848 | 41105 | + | NZ_LR134438.1 | Legionella adelaidensis |
| 118 | 2265606 | 2265890 | - | NC_008340.1 | Alkalilimnicola ehrlichii MLHE-1 |
| 119 | 1052161 | 1052436 | + | NZ_CP007031.1 | Marichromatium purpuratum 984 |
| 120 | 2549159 | 2549413 | - | NZ_CP061941.1 | Marinomonas algicola |
| 121 | 976245 | 976508 | + | NZ_LR134374.1 | Legionella spiritensis |
| 122 | 2550074 | 2550328 | - | NC_015276.1 | Marinomonas mediterranea MMB-1 |
| 123 | 476397 | 476675 | - | NC_013851.1 | Allochromatium vinosum DSM 180 |
| 124 | 585350 | 585610 | - | NZ_LR699119.1 | Aquicella siphonis |
| 125 | 1115547 | 1115825 | + | NC_014394.1 | Gallionella capsiferriformans ES-2 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_007484.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF13614.8 | 1.0 | 125 | 2 | same-strand | AAA domain |
| 2 | PF01656.25 | 1.0 | 125 | 2 | same-strand | CobQ/CobB/MinD/ParA nucleotide binding domain |
| 3 | PF10609.11 | 0.92 | 115 | 2 | same-strand | NUBPL iron-transfer P-loop NTPase |
| 4 | PF03775.18 | 0.9 | 113 | 856 | same-strand | Septum formation inhibitor MinC, C-terminal domain |
| 5 | PF05209.15 | 0.86 | 107 | 854 | same-strand | Septum formation inhibitor MinC, N-terminal domain |
++ More..