ProsmORF-pred
Result : Q3IK45
Protein Information
Information Type Description
Protein name ATP synthase subunit c (ATP synthase F(0) sector subunit c) (F-type ATPase subunit c) (F-ATPase subunit c) (Lipid-binding protein)
NCBI Accession ID CR954246.1
Organism Pseudoalteromonas translucida (strain TAC 125)
Left 3202642
Right 3202875
Strand -
Nucleotide Sequence ATGGAACTAGTATTAGGTCTTAAGTACATCGCAGTAGCTTTACTAATTGGCTTCGGTGCAATCGGTACAGCAGTTGGTTTTGGTAACATGGGCGGTAAATTCCTTGAAGCATGTGCGCGTCAACCTGAGCTTGCACCTTCGCTACAAGTTAAAATGTTTATCCTTGCTGGTCTAATCGATGCTGTAGCAATGATTGGTGTTGGTATCGCTATGGTATTGTTGTTCGTACTTTAA
Sequence MELVLGLKYIAVALLIGFGAIGTAVGFGNMGGKFLEACARQPELAPSLQVKMFILAGLIDAVAMIGVGIAMVLLFVL
Source of smORF Swiss-Prot
Function F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. {ECO:0000255|HAMAP-Rule:MF_01396}.; Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits. {ECO:0000255|HAMAP-Rule:MF_01396}.
Pubmed ID 16169927
Domain CDD:412393
Functional Category Others
Uniprot ID Q3IK45
ORF Length (Amino Acid) 77
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 463
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 1888548 1888781 + NZ_CP019628.1 Pseudoalteromonas aliena
2 3202642 3202875 - NC_007481.1 Pseudoalteromonas translucida
3 3508860 3509093 - NZ_CP011036.1 Pseudoalteromonas nigrifaciens
4 3383418 3383651 - NZ_CP011041.1 Pseudoalteromonas tetraodonis
5 41019 41252 - NZ_CP032090.1 Pseudoalteromonas donghaensis
6 3599383 3599616 - NZ_CP033065.1 Pseudoalteromonas agarivorans
7 3618723 3618956 - NZ_CP027523.1 Pseudoalteromonas carrageenovora
8 3657136 3657369 - NZ_CP023464.1 Pseudoalteromonas atlantica
9 3708125 3708358 - NZ_CP011028.1 Pseudoalteromonas espejiana DSM 9414
10 3135266 3135499 - NZ_CP011039.1 Pseudoalteromonas spongiae UST010723-006
11 707557 707790 - NZ_CP009888.1 Pseudoalteromonas piratica
12 3828406 3828648 - NZ_CP011025.1 Pseudoalteromonas arctica A 37-1-2
13 3832168 3832401 - NZ_CP013187.1 Pseudoalteromonas phenolica
14 3387923 3388165 - NZ_CP011030.1 Pseudoalteromonas issachenkonii
15 3193194 3193427 - NZ_CP029347.1 Saliniradius amylolyticus
16 1278428 1278661 - NZ_CP072425.1 Pseudoalteromonas viridis
17 3269926 3270159 - NZ_CP031961.1 Pseudoalteromonas tunicata
18 2075504 2075746 - NZ_CP072133.1 Pseudoalteromonas xiamenensis
19 4295142 4295363 - NZ_CP008849.1 Alteromonas australica
20 2084975 2085163 - NZ_CP052766.1 Alteromonas pelagimontana
21 15184 15405 + NZ_CP031769.1 Salinimonas sediminis
22 4464431 4464652 - NZ_CP046670.1 Alteromonas mediterranea
23 4635548 4635769 - NZ_CP014322.1 Alteromonas addita
24 4959084 4959305 - NC_015554.1 Alteromonas naphthalenivorans
25 4955853 4956104 - NC_014012.1 Shewanella violacea DSS12
26 5495305 5495556 - NC_009831.1 Shewanella sediminis HAW-EB3
27 5897739 5897990 - NC_010506.1 Shewanella woodyi ATCC 51908
28 6347131 6347382 - NZ_CP014782.1 Shewanella psychrophila
29 4208560 4208811 - NZ_CP037951.1 Parashewanella tropica
30 4777233 4777484 - NZ_CP022358.1 Shewanella bicestrii
31 5276592 5276843 - NC_016901.1 Shewanella baltica OS678
32 5426849 5427100 - NZ_CP037952.1 Parashewanella spongiae
33 4633415 4633666 - NZ_CP041036.1 Shewanella polaris
34 232123 232374 - NZ_CP034015.1 Shewanella livingstonensis
35 4581546 4581797 - NC_009092.1 Shewanella loihica PV-4
36 5390079 5390330 - NC_011566.1 Shewanella piezotolerans WP3
37 4830005 4830256 - NC_008345.1 Shewanella frigidimarina NCIMB 400
38 4975095 4975346 - NZ_CP046378.1 Shewanella algae
39 4303662 4303913 - NZ_CP022272.1 Shewanella marisflavi
40 4219431 4219682 - NZ_CP069213.1 Shewanella litorisediminis
41 4299653 4299904 - NC_008700.1 Shewanella amazonensis SB2B
42 4111900 4112151 - NZ_CP020373.1 Shewanella khirikhana
43 305797 306015 + NZ_CP072844.1 Psychrosphaera aestuarii
44 3850020 3850241 - NZ_CP017689.1 Thalassotalea crassostreae
45 4525261 4525512 - NC_007954.1 Shewanella denitrificans OS217
46 123773 124027 - NZ_CP045871.1 Litoricola lipolytica
47 57739 57939 + NC_003910.7 Colwellia psychrerythraea 34H
48 1567347 1567568 - NZ_CP041660.1 Catenovulum sediminis
49 6253235 6253492 - NC_002516.2 Pseudomonas aeruginosa PAO1
50 1925202 1925429 + NZ_CP020465.1 Cognaticolwellia beringensis
51 4053598 4053855 - NZ_CP031416.1 Gallaecimonas mangrovi
52 6084388 6084645 - NZ_CP047698.1 Pseudomonas knackmussii
53 4268178 4268408 - NC_014541.1 Ferrimonas balearica DSM 9799
54 4119493 4119684 - NC_016041.1 Glaciecola nitratireducens FR1064
55 6078380 6078637 - NZ_AP022642.1 Pseudomonas otitidis
56 3886188 3886445 - NC_015559.1 Marinomonas posidonica IVIA-Po-181
57 4049322 4049579 - NZ_CP054301.1 Marinomonas primoryensis
58 6045874 6046131 - NZ_CP043311.1 Pseudomonas lalkuanensis
59 4307013 4307270 - NZ_CP061941.1 Marinomonas algicola
60 4672762 4673019 - NC_015276.1 Marinomonas mediterranea MMB-1
61 3644819 3645076 + NZ_CP009533.1 Pseudomonas rhizosphaerae
62 4757281 4757538 - NZ_LR215729.2 Pseudomonas marincola
63 4883446 4883703 - NZ_CP062158.2 Pseudomonas lundensis
64 4517084 4517341 - NZ_CP012676.1 Pseudomonas versuta
65 687736 687993 - NZ_CP049044.1 Pseudomonas psychrophila
66 3661894 3662151 + NZ_CP031146.1 Pseudomonas plecoglossicida
67 157645 157902 - NZ_CP046621.1 Pseudomonas alkylphenolica
68 139730 139987 - NZ_CP071706.1 Pseudomonas donghuensis
69 5731150 5731407 - NZ_CP024159.1 Pseudomonas mosselii
70 189600 189857 - NZ_CP054205.1 Pseudomonas rhodesiae
71 5878174 5878431 - NC_008027.1 Pseudomonas entomophila L48
72 134565 134822 + NZ_CP070503.1 Pseudomonas atacamensis
73 5904702 5904959 - NZ_CP027723.1 Pseudomonas orientalis
74 5937445 5937702 - NZ_CP022562.1 Pseudomonas monteilii
75 5977339 5977596 - NZ_CP007039.1 Pseudomonas cichorii JBC1
76 6007431 6007688 - NZ_CP068034.2 Pseudomonas syringae
77 6085320 6085577 - NZ_CP023272.1 Pseudomonas lurida
78 5997738 5997995 - NZ_CP067022.1 Pseudomonas cannabina pv. alisalensis
79 3541713 3541970 - NZ_CP014262.1 Pseudomonas corrugata
80 6042766 6043023 - NZ_CP042804.1 Pseudomonas amygdali pv. tabaci str. ATCC 11528
81 6128743 6129000 - NZ_CP010896.1 Pseudomonas simiae
82 6145848 6146105 - NC_021505.1 Pseudomonas putida NBRC 14164
83 4977818 4978075 - NZ_CP009365.1 Pseudomonas soli
84 6313137 6313394 - NZ_CP029608.1 Pseudomonas kribbensis
85 6358283 6358540 - NZ_CP056030.1 Pseudomonas eucalypticola
86 6366655 6366912 - NZ_CP021425.1 Oleiphilus messinensis
87 4711686 4711943 + NZ_CP014205.2 Pseudomonas glycinae
88 6386310 6386567 - NC_004578.1 Pseudomonas syringae pv. tomato str. DC3000
89 6547194 6547451 - NZ_CP027756.1 Pseudomonas synxantha
90 6548341 6548598 - NZ_CP062253.1 Pseudomonas gozinkensis
91 6553909 6554166 - NZ_CP062252.1 Pseudomonas allokribbensis
92 6672275 6672532 - NZ_CP035088.1 Pseudomonas viciae
93 120666 120923 - NZ_CP051487.1 Pseudomonas umsongensis
94 4233552 4233809 + NZ_CP048810.1 Pseudomonas bijieensis
95 6727420 6727677 - NZ_CP034725.1 Pseudomonas brassicacearum
96 3908500 3908757 + NZ_CP005960.1 Pseudomonas mandelii JR-1
97 6749788 6750045 - NZ_CP014870.1 Pseudomonas silesiensis
98 6816481 6816738 - NZ_CP061079.1 Pseudomonas chlororaphis
99 6841680 6841937 - NZ_CP018420.1 Pseudomonas veronii
100 6616047 6616304 + NZ_CP012400.2 Pseudomonas yamanorum
101 6854732 6854989 - NZ_LS999205.1 Pseudomonas protegens CHA0
102 6938930 6939187 - NZ_CP014158.1 Pseudomonas citronellolis
103 11167 11424 + NZ_CP013124.1 Pseudomonas mendocina S5.2
104 615693 615950 + NZ_CP048833.1 Pseudomonas multiresinivorans
105 3316553 3316810 + NZ_CP017715.1 Marinobacter salinus
106 3883965 3884222 - NC_017506.1 Marinobacter adhaerens HP15
107 4521614 4521868 - NZ_CP043042.1 Marinobacter fonticola
108 240584 240841 + NZ_CP020931.1 Marinobacter salarius
109 5373013 5373270 - NZ_CP068551.1 Pseudomonas khazarica
110 6172562 6172819 - NZ_AP014862.1 Pseudomonas furukawaii
111 7202221 7202475 - NC_007645.1 Hahella chejuensis KCTC 2396
112 3375392 3375646 - NZ_CP049801.1 Acinetobacter shaoyimingii
113 1976304 1976561 - NZ_CP070273.1 Marinomonas foliarum
114 4515254 4515511 - NZ_CP061081.1 Marinomonas arctica
115 678993 679238 + NZ_CP071766.1 Acinetobacter towneri
116 2614956 2615201 - NZ_CP045650.1 Acinetobacter wanghuae
117 700155 700400 - NZ_CP012808.1 Acinetobacter equi
118 157184 157429 + NZ_CP044483.1 Acinetobacter schindleri
119 3126825 3127070 - NZ_CP024632.1 Acinetobacter junii
120 248934 249179 + NZ_CP029397.2 Acinetobacter defluvii
121 219839 220084 + NZ_CP035934.2 Acinetobacter cumulans
122 3286937 3287182 - NZ_CP030880.1 Acinetobacter haemolyticus
123 180004 180249 + NC_005966.1 Acinetobacter baylyi ADP1
124 1858846 1859091 - NZ_CP040105.1 Acinetobacter nosocomialis M2
125 3301035 3301280 + NC_016603.1 Acinetobacter pittii PHEA-2
126 1743713 1743958 - NZ_CP070518.1 Acinetobacter calcoaceticus
127 3780767 3781012 - NZ_CP053391.1 Acinetobacter lactucae
128 3757838 3758083 - NZ_CP015121.1 Acinetobacter baumannii
129 2906362 2906607 - NZ_CP041970.1 Acinetobacter dispersus
130 3878911 3879156 - NZ_CP065820.1 Acinetobacter seifertii
131 3960863 3961108 - NC_014259.1 Acinetobacter oleivorans DR1
132 4453852 4454097 - NZ_AP014630.1 Acinetobacter guillouiae
133 11709 11957 + NZ_CP047491.1 Microbulbifer hydrolyticus
134 3911703 3911948 - NZ_CP014864.1 Microbulbifer thermotolerans
135 4239393 4239641 - NZ_CP019650.1 Microbulbifer agarilyticus
136 1023777 1024025 - NZ_CP014143.1 Microbulbifer aggregans
137 2528430 2528654 - NZ_CP034759.1 Litorilituus sediminis
138 2825416 2825673 - NC_006512.1 Idiomarina loihiensis L2TR
139 3582680 3582907 - NZ_CP043420.1 Kushneria phosphatilytica
140 2760008 2760241 + NC_018868.3 Simiduia agarivorans SA1 = DSM 21679
141 4109705 4109953 - NZ_CP036536.1 Salinimonas lutimaris
142 4020750 4020962 - NZ_CP021435.1 Halomonas beimenensis
143 3666516 3666743 - NC_007963.1 Chromohalobacter salexigens DSM 3043
144 1518020 1518247 + NZ_CP023559.1 Salinicola tamaricis
145 1719319 1719531 - NZ_CP018139.1 Halomonas aestuarii
146 2230734 2230973 - NZ_LR134374.1 Legionella spiritensis
147 650115 650375 - NZ_CP064781.1 Azospira restricta
148 4165876 4166085 - NZ_CP014544.1 Zhongshania aliphaticivorans
149 4037305 4037517 - NC_014532.2 Halomonas elongata DSM 2581
150 4730671 4730883 - NZ_CP013106.1 Halomonas huangheensis
151 864991 865218 - NZ_CP042382.1 Pistricoccus aurantiacus
152 135544 135759 - NZ_CP038254.1 Legionella israelensis
153 81595 81813 - NZ_LR134417.1 Legionella adelaidensis
154 53819 54025 + NZ_CP016397.1 Legionella clemsonensis
155 3400880 3401086 - NZ_LN681225.1 Legionella hackeliae
156 3294031 3294270 - NZ_LN614830.1 Tatlockia micdadei
157 2911142 2911381 - NZ_LT906451.1 Legionella lansingensis
158 3719830 3720048 - NZ_LT906442.1 Legionella waltersii
159 334691 334888 + NZ_CP060009.1 Pseudomonas sediminis
160 2213978 2214175 - NZ_CP070505.1 Pseudomonas toyotomiensis
161 608538 608783 - NZ_CP022355.1 Paraphotobacterium marinum
162 3229197 3229451 - NZ_CP049916.1 Acinetobacter lanii
163 3391613 3391828 - NZ_CP013742.1 Legionella pneumophila
164 4156885 4157103 - NZ_LN614827.1 Legionella fallonii LLAP-10
165 5502 5747 + NC_002977.6 Methylococcus capsulatus str. Bath
166 2415241 2415498 - NZ_CP036200.1 Shewanella maritima
167 3171985 3172248 - NZ_CP041783.1 Shewanella donghaensis
168 5158847 5159104 - NC_009901.1 Shewanella pealeana ATCC 700345
169 5211128 5211385 - NC_010334.1 Shewanella halifaxensis HAW-EB4
170 2383894 2384109 + NZ_CP014476.1 Methylomonas denitrificans
171 4552223 4552480 - NC_008709.1 Psychromonas ingrahamii 37
172 4040893 4041132 - NC_013861.1 Legionella longbeachae NSW150
173 3717422 3717661 - NZ_CP025491.2 Legionella sainthelensi
174 3960642 3960875 - NZ_CP060084.1 Teredinibacter haidensis
175 5003016 5003249 - NC_007912.1 Saccharophagus degradans 2-40
176 4953467 4953712 - NZ_CP020472.1 Shewanella japonica
177 1660331 1660546 + NZ_CP043929.1 Methylomonas rhizoryzae
178 53244 53441 - NZ_CP051183.1 Bermanella marisrubri
179 3064633 3064878 + NZ_LS483250.1 Moritella yayanosii
180 3953562 3953804 - NZ_CP044399.1 Moritella marina ATCC 15381
181 856131 856331 - NZ_CP060092.1 Teredinibacter purpureus
182 4948602 4948823 - NC_015572.1 Methylomonas methanica MC09
183 1316609 1316857 - NZ_CP012678.1 Psychrobacter urativorans
184 2702601 2702807 + NZ_CP029822.1 Entomomonas moraniae
185 2610325 2610582 + NZ_CP035688.1 Vibrio metoecus
186 13145 13402 + NZ_AP014524.1 Vibrio cholerae MS6
187 137071 137328 - NZ_CP044069.1 Vibrio vulnificus
188 996083 996337 - NZ_CP028926.1 Pasteurella multocida
189 2497775 2498023 - NC_007204.1 Psychrobacter arcticus 273-4
190 2862245 2862493 - NC_007969.1 Psychrobacter cryohalolentis K5
191 3130530 3130778 - NZ_CP014945.1 Psychrobacter alimentarius
192 2312143 2312391 + NZ_LR884459.1 Psychrobacter arenosus
193 2860425 2860679 - NZ_CP022741.1 Vibrio qinghaiensis
194 1458393 1458650 + NZ_CP065150.1 Vibrio kanaloae
195 3280863 3281120 - NZ_CP009354.1 Vibrio tubiashii ATCC 19109
196 3293274 3293531 - NC_011753.2 Vibrio atlanticus
197 3322894 3323151 - NZ_CP039700.1 Vibrio cyclitrophicus
198 3434408 3434665 + NZ_LT960611.1 Vibrio tapetis subsp. tapetis
199 487936 488190 + NZ_CP015029.1 Frederiksenia canicola
200 536744 536998 + NZ_CP009610.1 Haemophilus influenzae
201 484453 484707 + NZ_LS483458.1 Haemophilus haemolyticus
202 610453 610707 + NZ_LS483429.1 Haemophilus aegyptius
203 354267 354521 - NZ_LR134167.1 Avibacterium volantium
204 616103 616357 + NZ_CP029206.1 Actinobacillus porcitonsillarum
205 1601027 1601281 + NC_011852.1 Glaesserella parasuis SH0165
206 1947772 1948026 + NZ_LT906448.1 Pasteurella dagmatis
207 1647743 1647997 - NZ_CP040863.1 Rodentibacter heylii
208 357690 357908 + NC_016112.1 Methylotuvimicrobium alcaliphilum 20Z
209 476525 476743 + NZ_CP035467.1 Methylotuvimicrobium buryatense
210 32099 32368 + NZ_CP016268.1 Woeseia oceani
211 3454442 3454711 - NC_011901.1 Thioalkalivibrio sulfidiphilus HL-EbGr7
212 2049433 2049687 - NZ_CP007715.1 Actinobacillus equuli subsp. equuli
213 2070888 2071142 + NZ_CP009159.1 Actinobacillus suis ATCC 33415
214 4565001 4565207 - NZ_CP011835.1 Azotobacter chroococcum
215 2705451 2705657 + NZ_CP045302.1 Azotobacter salinestris
216 5334704 5334910 - NC_012560.1 Azotobacter vinelandii DJ
217 7760610 7760867 - NZ_CP018632.1 Granulosicoccus antarcticus IMCC3135
218 5227 5481 + NZ_CP006944.1 Mannheimia varigena USDA-ARS-USMARC-1312
219 425848 426102 - NZ_CP046531.1 Mannheimia ovis
220 467041 467295 - NZ_CP055305.1 Mannheimia pernigra
221 1861217 1861471 + NZ_CP015031.1 Basfia succiniciproducens
222 2277020 2277274 - NC_006300.1 [Mannheimia] succiniciproducens MBEL55E
223 1924790 1925044 - NZ_CP030753.1 Actinobacillus pleuropneumoniae
224 34458 34712 + NC_021883.1 Mannheimia haemolytica USMARC_2286
225 3976896 3977117 - NZ_CP011494.1 Marinobacter psychrophilus
226 3957455 3957694 - NZ_AP017928.1 Methylocaldum marinum
227 191299 191535 + NZ_CP011797.1 Reinekea forsetii
228 42853 43107 - NZ_CP016604.1 Otariodibacter oris
229 504638 504847 + NZ_CP065728.1 Moraxella nonliquefaciens
230 810394 810645 - NZ_CP039731.1 Aquitalea aquatilis
231 157448 157699 + NZ_CP047241.1 Aquitalea denitrificans
232 33413 33667 - NZ_CP016605.1 Bisgaardia hudsonensis
233 5035730 5035966 + NZ_CP040017.1 Massilia umbonata
234 1584726 1584953 - NZ_CP014234.1 Moraxella osloensis
235 392869 393114 + NC_014147.1 Moraxella catarrhalis BBH18
236 54913 55158 - NZ_LR134343.1 Moraxella cuniculi
237 351578 351787 + NZ_CP030241.1 Moraxella bovis
238 328091 328348 - NZ_CP070624.1 Photobacterium damselae subsp. damselae
239 3125143 3125397 - NZ_CP045350.1 Vibrio aquimaris
240 3501493 3501750 - NZ_CP071325.1 Photobacterium ganghwense
241 319604 319861 - NZ_CP005974.1 Photobacterium gaetbulicola Gung47
242 335099 335308 + NZ_CP011381.2 Moraxella bovoculi
243 380349 380558 + NZ_CP011158.1 Moraxella ovis
244 4407583 4407780 - NZ_CP065435.1 Halomonas sp. SS10-MC5
245 443212 443463 + NZ_CP028324.1 Massilia armeniaca
246 3805065 3805301 + NZ_CP046904.1 Massilia flava
247 6891362 6891601 - NZ_CP036401.1 Massilia albidiflava
248 4095232 4095429 - NZ_CP031093.1 Hydrocarboniclastica marina
249 169473 169718 + NZ_CP032134.1 Acinetobacter chinensis
250 277967 278212 + NZ_CP016895.1 Acinetobacter larvae
251 3943265 3943474 - NZ_AP014936.1 Sulfurifustis variabilis
252 953848 954075 + NZ_CP059082.1 Halomonas titanicae
253 3319128 3319385 - NC_011312.1 Aliivibrio salmonicida LFI1238
254 2826215 2826466 - NZ_CP040021.1 Salinivibrio kushneri
255 2887695 2887949 - NZ_CP033078.1 Vibrio zhugei
256 13484 13738 + NZ_AP019651.1 Vibrio taketomensis
257 2738196 2738450 + NZ_CP014035.2 Vibrio fluvialis
258 1276808 1277062 + NZ_CP014056.2 Grimontia hollisae
259 2860450 2860704 - NZ_AP019657.1 Vibrio ponticus
260 2926480 2926734 + NZ_CP009977.1 Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
261 433595 433849 + NC_013456.1 Vibrio antiquarius
262 3247919 3248173 - NZ_CP030788.1 Vibrio campbellii
263 484873 485127 - NZ_CP040990.1 Vibrio furnissii
264 3277408 3277662 - NZ_CP031781.1 Vibrio parahaemolyticus
265 3122293 3122547 + NZ_CP018312.1 Vibrio rotiferianus
266 3428647 3428901 - NZ_AP014635.1 Vibrio tritonius
267 203287 203541 - NZ_CP009467.1 Vibrio harveyi
268 14924 15130 + NZ_CP047475.1 Vibrio astriarenae
269 329810 330031 + NZ_CP041335.1 Chitinolyticbacter meiyuanensis
270 780516 780770 - NZ_LR134510.1 Actinobacillus delphinicola
271 3131048 3131305 - NZ_CP032093.1 Vibrio alfacsensis
272 3003620 3003877 + NZ_CP016414.1 Vibrio scophthalmi
273 1833262 1833519 - NZ_CP019959.1 Vibrio owensii
274 2252569 2252826 + NZ_CP025792.1 Vibrio jasicida 090810c
275 433658 433912 - NZ_LS483443.1 Aggregatibacter segnis ATCC 33393
276 1354456 1354710 - NZ_LR134327.1 Aggregatibacter aphrophilus ATCC 33389
277 4092679 4092906 - NZ_AP022843.1 Halomonas hydrothermalis
278 4409690 4409917 - NZ_CP065135.1 Halomonas venusta
279 589999 590253 + NZ_LT906463.1 Haemophilus pittmaniae
280 1808844 1809059 - NZ_CP046793.1 Vibrio metschnikovii
281 3467555 3467800 - NZ_CP064338.1 Schlegelella thermodepolymerans
282 2615240 2615452 - NZ_CP064338.1 Schlegelella thermodepolymerans
283 3334602 3334847 - NZ_CP013189.1 Pseudohongiella spirulinae
284 456160 456414 + NZ_CP061280.1 Mannheimia bovis
285 1792875 1793123 + NC_006513.1 Aromatoleum aromaticum EbN1
286 2327699 2327953 - NZ_CP006954.1 Bibersteinia trehalosi USDA-ARS-USMARC-188
287 3917753 3917980 - NZ_CP048602.1 Halomonas piezotolerans
288 1937936 1938133 - NC_017856.1 Methylophaga frappieri
289 236596 236793 - NC_017857.3 Methylophaga nitratireducenticrescens
290 534738 534986 + NZ_AP022345.1 Fluviibacter phosphoraccumulans
291 3998701 3998949 + NZ_LR778301.1 Denitratisoma oestradiolicum
292 2925237 2925485 - NZ_CP010554.1 Rugosibacter aromaticivorans
293 540567 540836 + NC_008786.1 Verminephrobacter eiseniae EF01-2
294 207998 208246 + NC_008825.1 Methylibium petroleiphilum PM1
295 2800067 2800312 - NZ_CP029331.1 Thauera hydrothermalis
296 132698 132943 + NZ_CP028339.1 Thauera aromatica K172
297 129644 129889 + NZ_CP018839.1 Thauera chlorobenzoica
298 2996028 2996273 - NZ_CP014646.1 Thauera humireducens
299 189039 189284 + NZ_CP016210.1 Azoarcus olearius
300 4171321 4171569 - NZ_CP035503.1 Rhodoferax sediminis
301 6326899 6327156 - NZ_CP048878.1 Spartinivicinus ruber
302 1941572 1941820 + NZ_CP059467.1 Aromatoleum bremense
303 2612276 2612521 - NZ_CP059560.1 Aromatoleum petrolei
304 2479851 2480099 - NZ_CP060783.1 Diaphorobacter aerolatus
305 3535730 3535966 - NZ_CP043869.1 Neptunomonas concharum
306 3130645 3130890 - NZ_CP025682.1 Azoarcus pumilus
307 5522 5776 - NZ_CP016180.1 Pasteurella skyensis
308 1282898 1283146 - NZ_CP014671.1 Immundisolibacter cernigliae
309 3507007 3507255 - NZ_CP022579.1 Oryzomicrobium terrae
310 191251 191502 + NZ_CP051461.1 Polaromonas vacuolata
311 253702 253950 + NC_008781.1 Polaromonas naphthalenivorans CJ2
312 424759 425010 + NZ_CP037867.1 Hydrogenophaga pseudoflava
313 687486 687734 + NZ_CP017476.1 Hydrogenophaga crassostreae
314 297907 298155 + NZ_CP027792.1 Pulveribacter suum
315 3859939 3860187 - NZ_CP054840.1 Acidovorax antarcticus
316 2993984 2994223 - NC_013959.1 Sideroxydans lithotrophicus ES-1
317 1263826 1264074 - NZ_CP027669.1 Simplicispira suum
318 179400 179648 - NZ_CP043575.1 Comamonas koreensis
319 1024224 1024472 - NZ_CP020121.1 Comamonas kerstersii
320 297613 297882 + NZ_CP021359.1 Acidovorax carolinensis
321 2935520 2935768 - NZ_CP016278.1 Diaphorobacter polyhydroxybutyrativorans
322 2960183 2960431 - NZ_CP060790.1 Acidovorax monticola
323 406493 406741 + NZ_CP051298.1 Alicycliphilus denitrificans
324 192826 193074 + NZ_CP060714.1 Diaphorobacter ruginosibacter
325 5221408 5221656 + NZ_CP065748.1 Delftia lacustris
326 5197301 5197549 + NZ_CP017420.1 Delftia tsuruhatensis
327 393669 393917 + NC_008752.1 Acidovorax citrulli AAC00-1
328 472369 472617 + NC_015138.1 Acidovorax avenae subsp. avenae ATCC 19860
329 502111 502359 - NZ_CP027666.1 Ottowia oryzae
330 565996 566241 + NZ_CP021455.1 Comamonas serinivorans
331 361854 362102 + NZ_CP019239.1 Rhodoferax saidenbachensis
332 476102 476350 + NZ_CP013729.1 Roseateles depolymerans
333 539495 539743 + NZ_CP040709.1 Inhella inkyongensis
334 3965128 3965355 - NZ_CP014226.1 Halomonas chromatireducens
335 3821625 3821861 - NZ_AP014545.1 Amphritea japonica ATCC BAA-1530
336 3485459 3485650 + NZ_CP051180.1 Ferrimonas lipolytica
337 558546 558791 + NZ_CP019236.1 Rhodoferax koreense
338 718358 718567 + NZ_CP007142.1 Gynuella sunshinyii YC6258
339 113294 113539 - NC_007908.1 Rhodoferax ferrireducens T118
340 1729856 1730119 - NC_021291.1 Spiribacter salinus M19-40
341 3155864 3156112 + NZ_CP047650.1 Xylophilus rhododendri
342 1347312 1347560 - NZ_CP020046.1 Thiomonas intermedia
343 357789 358037 + NC_015677.1 Ramlibacter tataouinensis TTB310
344 2958015 2958209 - NC_015677.1 Ramlibacter tataouinensis TTB310
345 3442750 3442989 - NZ_AP021884.1 Sulfuriferula plumbiphila
346 3545314 3545571 - NZ_CP029210.1 Aquabacterium olei
347 450138 450347 + NZ_CP024608.1 Massilia violaceinigra
348 830829 831071 + NC_017964.1 Advenella kashmirensis WT001
349 838914 839156 + NZ_CP003915.1 Advenella mimigardefordensis DPN7
350 2842961 2843155 + NZ_CP011412.1 Sedimenticola thiotaurini
351 4050899 4051141 + NZ_CP019038.1 Massilia putida
352 177249 177470 + NZ_CP012154.1 Wenzhouxiangella marina
353 5532252 5532449 - NZ_CP013232.1 Collimonas fungivorans
354 3596735 3596974 + NZ_CP028901.1 Algicoccus marinus
355 4521426 4521665 - NZ_LT907988.1 Orrella dioscoreae
356 2511283 2511492 + NZ_LT671418.1 Herminiimonas arsenitoxidans
357 4642342 4642539 - NZ_CP013235.1 Collimonas arenae
358 5507919 5508116 - NZ_CP013236.1 Collimonas pratensis
359 14042 14290 + NZ_AP014568.1 Serpentinomonas raichei
360 3352006 3352245 - NZ_AP021881.1 Sulfuriferula nivalis
361 1940181 1940423 + NZ_CP047165.1 Pelistega ratti
362 4199651 4199872 + NZ_CP018845.1 Herbaspirillum robiniae
363 4994510 4994719 - NZ_CP011930.1 Herbaspirillum seropedicae
364 5035007 5035216 - NZ_CP013737.1 Herbaspirillum rubrisubalbicans M1
365 5043539 5043748 - NZ_CP037993.1 Herbaspirillum huttiense
366 154130 154372 + NC_016043.1 Taylorella asinigenitalis MCE3
367 140033 140275 + NZ_CP021060.1 Taylorella equigenitalis
368 3757978 3758220 - NZ_HG916765.1 Castellaniella defragrans 65Phen
369 5483395 5483637 - NZ_CP016171.1 Bordetella bronchialis
370 321355 321597 + NZ_CP043146.1 Bordetella holmesii
371 3498599 3498841 - NC_010645.1 Bordetella avium 197N
372 366184 366426 + NC_018518.1 Bordetella pertussis 18323
373 305492 305734 + NZ_CP016440.1 Bordetella pseudohinzii
374 3785490 3785732 - NZ_AP019378.1 Bordetella parapertussis
375 1931764 1932006 + NZ_CP021395.1 Bordetella hinzii
376 400541 400783 + NZ_LR134326.1 Bordetella bronchiseptica
377 370228 370470 + NC_010170.1 Bordetella petrii
378 5358149 5358391 - NZ_CP016172.1 Bordetella flabilis
379 2988330 2988524 + NZ_LR134302.1 Achromobacter spanius
380 388969 389211 + NZ_CP038034.1 Achromobacter insolitus
381 5403660 5403902 + NZ_CP053986.1 Achromobacter denitrificans
382 1917074 1917337 - NC_022664.1 Spiribacter curvatus
383 2362617 2362859 - NZ_CP022987.1 Pusillimonas thiosulfatoxidans
384 91694 91939 + NZ_AP018558.1 Hydrogenophilus thermoluteolus
385 869372 869593 + NZ_CP009238.1 Basilea psittacipulmonis DSM 24701
386 21929 22174 + NZ_AP014569.1 Serpentinomonas mccroryi
387 3098561 3098752 - NZ_AP018725.1 Sulfuriflexus mobilis
388 3222670 3222912 - NZ_AP018724.1 Sulfurivermis fontis
389 3816596 3816790 - NZ_AP022853.1 Sulfurimicrobium lacus
390 3120771 3120965 - NC_022357.1 Sulfuricella denitrificans skB26
391 6024907 6025164 - NZ_CP024645.1 Rhizobacter gummiphilus
392 2707000 2707239 - NZ_AP018721.1 Sulfuritortus calidifontis
393 2849339 2849581 + NZ_CP013119.1 Alcaligenes faecalis
394 746696 746896 - NZ_LR134378.1 Lautropia mirabilis
395 239937 240137 + NZ_AP018786.1 Sutterella megalosphaeroides
396 1278746 1279006 - NZ_CP017480.1 Luteibacter rhizovicinus DSM 16549
397 3791871 3792128 - NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H
398 251684 251878 + NZ_AP012273.1 Thiolapillus brandeum
399 3162 3353 + NC_016893.1 Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)
400 3950393 3950641 - NC_010524.1 Leptothrix cholodnii SP-6
401 1934706 1934948 + NZ_CP040882.1 Sutterella faecalis
402 2608249 2608491 - NZ_CP068055.1 Sutterella wadsworthensis
403 4357229 4357495 - NZ_CP041352.1 Casimicrobium huifangae
404 4895827 4896018 - NC_018691.1 Alcanivorax dieselolei B5
405 4565087 4565284 - NC_010995.1 Cellvibrio japonicus Ueda107
406 701935 702171 - NZ_CP022278.1 Neisseria chenwenguii
407 259755 259994 + NZ_CP031415.1 Saccharospirillum mangrovi
408 6114153 6114407 - NZ_CP043046.1 Pigmentiphaga aceris
409 1672475 1672714 - NZ_CP019343.1 Oceanicoccus sagamiensis
410 3590 3784 + NC_004545.1 Buchnera aphidicola str. Bp (Baizongia pistaciae)
411 332474 332704 + NZ_CP041046.1 Luteibacter pinisoli
412 2050244 2050462 - NZ_CP034464.1 Undibacterium parvum
413 110480 110674 - NZ_CP007445.1 Gilliamella apicola
414 237216 237425 + NC_017033.1 Frateuria aurantia DSM 6220
415 485255 485461 + NZ_CP031124.1 Ephemeroptericola cinctiostellae
416 2764118 2764354 + NZ_CP022684.1 Ketobacter alkanivorans
417 3730860 3731120 - NZ_CP046603.1 Lysobacter soli
418 4552159 4552371 - NZ_CP053069.1 Usitatibacter rugosus
419 3397824 3398030 - NZ_CP011971.1 Steroidobacter denitrificans
420 5336037 5336300 - NZ_AP014940.1 Lysobacter enzymogenes
421 5930306 5930533 + NZ_CP027860.1 Ahniella affigens
422 430641 430889 + NZ_CP035708.1 Sphaerotilus natans subsp. sulfidivorans
423 3535807 3535995 - NZ_CP051883.1 Aeromonas salmonicida
424 2188279 2188485 - NZ_CP048711.1 Kineobactrum salinum
425 1254346 1254624 - NZ_CP060711.1 Thermomonas brevis
426 877001 877195 - NZ_CP046027.1 Neisseria brasiliensis
427 868119 868352 - NZ_CP031699.1 Neisseria animalis
428 1980303 1980536 - NZ_LR134516.1 Neisseria animaloris
429 1085883 1086116 - NZ_LR134533.1 Neisseria weaveri
430 1364804 1365037 + NZ_CP059564.1 Alysiella filiformis
431 356770 357003 + NZ_CP059571.1 Neisseria bacilliformis
432 813538 813771 + NZ_CP059565.1 Neisseria wadsworthii
433 230332 230565 - NZ_LT906434.1 Neisseria zoodegmatis
434 526611 526844 - NZ_LR134313.1 Neisseria canis
435 2155132 2155365 - NZ_CP060414.1 Neisseria musculi
436 262733 262927 + NZ_CP059567.1 Neisseria shayeganii
437 3890077 3890268 - NC_020888.1 Thalassolituus oleivorans MIL-1
438 2075643 2075855 + NZ_CP012371.1 Nitrosospira briensis C-128
439 283058 283270 - NZ_CP021106.3 Nitrosospira lacus
440 328822 329034 + NC_007614.1 Nitrosospira multiformis ATCC 25196
441 1261525 1261719 + NZ_CP059563.1 Conchiformibius steedae
442 283556 283759 + NC_008344.1 Nitrosomonas eutropha C91
443 236831 237043 + NC_004757.1 Nitrosomonas europaea ATCC 19718
444 1216491 1216718 + NZ_CP021323.1 Kushneria konosiri
445 2083316 2083543 - NZ_CP021358.1 Kushneria marisflavi
446 2985622 2985873 - NC_012969.1 Methylovorus glucosetrophus SIP3-4
447 2535858 2536064 - NC_012968.1 Methylotenera mobilis JLW8
448 3047890 3048141 - NC_014207.1 Methylotenera versatilis 301
449 2960254 2960457 - NC_007947.1 Methylobacillus flagellatus KT
450 3152892 3153086 - NC_014394.1 Gallionella capsiferriformans ES-2
451 4288550 4288789 - NZ_CP036422.1 Halioglobus maricola
452 374081 374284 - NZ_CP011451.1 Nitrosomonas communis
453 684846 685058 - NZ_CP013341.1 Nitrosomonas ureae
454 2488796 2488990 - NZ_AP018689.1 Vibrio aphrogenes
455 2762470 2762664 - NZ_AP018685.1 Vibrio rumoiensis
456 28520 28720 + NZ_AP018933.1 Zymobacter palmae
457 5176135 5176332 - NZ_CP015839.1 Marinobacterium aestuarii
458 42180 42422 - NZ_CP072455.1 Xenorhabdus budapestensis
459 25438 25680 - NZ_FO704551.1 Xenorhabdus poinarii G6
460 47796 48035 - NZ_FO704550.1 Xenorhabdus doucetiae
461 3392516 3392752 + NZ_CP060401.1 Xenorhabdus nematophila
462 3340597 3340794 - NZ_CP016176.1 Xenorhabdus hominickii
463 31626 31823 - NC_013892.1 Xenorhabdus bovienii SS-2004
464 2394115 2394306 + NZ_CP044098.1 Citrobacter portucalensis
465 2695988 2696179 - NZ_CP033744.1 Citrobacter freundii
++ More..
Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NZ_CP019628.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF02527.17 0.6 278 3243.5 same-strand rRNA small subunit methyltransferase G
2 PF02195.20 0.61 283 1534 same-strand ParB-like nuclease domain
3 PF17762.3 0.61 282 1534.0 same-strand HTH domain found in ParB protein
4 PF03899.17 0.93 429 949 same-strand ATP synthase I chain
5 PF00119.22 1.0 463 83 same-strand ATP synthase A chain
6 PF00430.20 1.0 462 57.0 same-strand ATP synthase B/B' CF(0)
7 PF00213.20 0.98 455 539 same-strand ATP synthase delta (OSCP) subunit
8 PF00006.27 1.0 462 1317.5 same-strand ATP synthase alpha/beta family, nucleotide-binding domain
9 PF00306.29 1.0 461 1099 same-strand ATP synthase alpha/beta chain, C terminal domain
10 PF02874.25 1.0 463 1317 same-strand ATP synthase alpha/beta family, beta-barrel domain
11 PF00231.21 1.0 462 2691.0 same-strand ATP synthase
++ More..