Result : Q3IJV4
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Sec-independent protein translocase protein TatA |
| NCBI Accession ID | CR954246.1 |
| Organism | Pseudoalteromonas translucida (strain TAC 125) |
| Left | 3101872 |
| Right | 3102120 |
| Strand | + |
| Nucleotide Sequence | ATGGGATTTGGCGGTATTAGTCTTTGGCAGTTATTGATTGTATTAGCAATTATTGTACTTTTGTTTGGCACTAAAAAATTACGCGGTATTGGTGGTGATTTAGGTGGAGCAGTTAAAGGCTTTAAAAAAGCAATGTCTGACGAAAAAAATACAGATAAAGAAAAGCCAGAGCAGATTCAAAAATCAGAAGAAAGTGCACCGCTTGATTCTGCCCATACTGAAAAAAATAAAGACAATAACAAGGTTTAA |
| Sequence | MGFGGISLWQLLIVLAIIVLLFGTKKLRGIGGDLGGAVKGFKKAMSDEKNTDKEKPEQIQKSEESAPLDSAHTEKNKDNNKV |
| Source of smORF | Swiss-Prot |
| Function | Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. {ECO:0000255|HAMAP-Rule:MF_00236}. |
| Pubmed ID | 16169927 |
| Domain | CDD:294511 |
| Functional Category | Others |
| Uniprot ID | Q3IJV4 |
| ORF Length (Amino Acid) | 82 |
++ More..
| Conservation Analysis |
No. of Species: 183
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3101872 | 3102120 | + | NC_007481.1 | Pseudoalteromonas translucida |
| 2 | 3407614 | 3407862 | + | NZ_CP011036.1 | Pseudoalteromonas nigrifaciens |
| 3 | 101981 | 102229 | - | NZ_CP011025.1 | Pseudoalteromonas arctica A 37-1-2 |
| 4 | 3243310 | 3243570 | + | NZ_CP011041.1 | Pseudoalteromonas tetraodonis |
| 5 | 3278599 | 3278859 | + | NZ_CP011030.1 | Pseudoalteromonas issachenkonii |
| 6 | 3574551 | 3574805 | + | NZ_CP011028.1 | Pseudoalteromonas espejiana DSM 9414 |
| 7 | 101180 | 101434 | - | NZ_CP027523.1 | Pseudoalteromonas carrageenovora |
| 8 | 3491054 | 3491308 | + | NZ_CP033065.1 | Pseudoalteromonas agarivorans |
| 9 | 3550525 | 3550779 | + | NZ_CP023464.1 | Pseudoalteromonas atlantica |
| 10 | 1709595 | 1709837 | + | NZ_CP019628.1 | Pseudoalteromonas aliena |
| 11 | 3644387 | 3644617 | + | NZ_CP013187.1 | Pseudoalteromonas phenolica |
| 12 | 1865444 | 1865680 | + | NZ_CP072133.1 | Pseudoalteromonas xiamenensis |
| 13 | 96538 | 96789 | + | NZ_CP031415.1 | Saccharospirillum mangrovi |
| 14 | 4489239 | 4489490 | - | NZ_LR134376.1 | Aeromonas encheleia |
| 15 | 3535615 | 3535851 | + | NZ_CP032090.1 | Pseudoalteromonas donghaensis |
| 16 | 422638 | 422880 | + | NZ_CP031769.1 | Salinimonas sediminis |
| 17 | 93807 | 94067 | + | NC_011753.2 | Vibrio atlanticus |
| 18 | 1373845 | 1374105 | - | NZ_CP065150.1 | Vibrio kanaloae |
| 19 | 3234941 | 3235201 | - | NZ_CP039700.1 | Vibrio cyclitrophicus |
| 20 | 2811595 | 2811831 | - | NZ_CP022741.1 | Vibrio qinghaiensis |
| 21 | 3159996 | 3160241 | - | NZ_CP031781.1 | Vibrio parahaemolyticus |
| 22 | 2993850 | 2994074 | + | NZ_CP029347.1 | Saliniradius amylolyticus |
| 23 | 3226482 | 3226724 | - | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 24 | 3027400 | 3027648 | - | NZ_CP032093.1 | Vibrio alfacsensis |
| 25 | 463499 | 463756 | - | NZ_CP022358.1 | Shewanella bicestrii |
| 26 | 4007938 | 4008186 | + | NC_014541.1 | Ferrimonas balearica DSM 9799 |
| 27 | 3504474 | 3504719 | - | NZ_CP051883.1 | Aeromonas salmonicida |
| 28 | 87073 | 87321 | + | NZ_CP050851.1 | Aeromonas hydrophila |
| 29 | 406493 | 406735 | - | NZ_CP040990.1 | Vibrio furnissii |
| 30 | 2130446 | 2130694 | - | NZ_CP025792.1 | Vibrio jasicida 090810c |
| 31 | 2805910 | 2806152 | + | NZ_CP014035.2 | Vibrio fluvialis |
| 32 | 3847092 | 3847337 | - | NZ_CP017715.1 | Marinobacter salinus |
| 33 | 3274929 | 3275180 | + | NZ_CP044060.1 | Aeromonas veronii |
| 34 | 4704191 | 4704439 | - | NZ_AP022188.1 | Aeromonas media |
| 35 | 3476444 | 3476680 | - | NZ_CP043869.1 | Neptunomonas concharum |
| 36 | 3351229 | 3351477 | - | NZ_AP014635.1 | Vibrio tritonius |
| 37 | 217605 | 217874 | + | NZ_LS483470.1 | Leminorella richardii |
| 38 | 1052637 | 1052879 | - | NZ_CP007142.1 | Gynuella sunshinyii YC6258 |
| 39 | 3585406 | 3585648 | + | NZ_CP011494.1 | Marinobacter psychrophilus |
| 40 | 657878 | 658078 | - | NC_018691.1 | Alcanivorax dieselolei B5 |
| 41 | 3063334 | 3063576 | + | NZ_CP016414.1 | Vibrio scophthalmi |
| 42 | 318316 | 318561 | - | NC_013456.1 | Vibrio antiquarius |
| 43 | 5015224 | 5015460 | + | NC_009831.1 | Shewanella sediminis HAW-EB3 |
| 44 | 3442729 | 3443010 | - | NZ_CP029185.2 | Limnobaculum parvum |
| 45 | 4263052 | 4263333 | - | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 46 | 1911328 | 1911567 | + | NZ_CP046793.1 | Vibrio metschnikovii |
| 47 | 3526069 | 3526320 | + | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 48 | 3350288 | 3350527 | + | NC_017506.1 | Marinobacter adhaerens HP15 |
| 49 | 3090199 | 3090441 | - | NZ_CP047475.1 | Vibrio astriarenae |
| 50 | 106480 | 106734 | + | NZ_AP018685.1 | Vibrio rumoiensis |
| 51 | 2809171 | 2809413 | - | NZ_AP019657.1 | Vibrio ponticus |
| 52 | 2473922 | 2474146 | - | NZ_CP048711.1 | Kineobactrum salinum |
| 53 | 451445 | 451666 | + | NZ_CP048711.1 | Kineobactrum salinum |
| 54 | 3923575 | 3923820 | + | NZ_CP040449.1 | Aeromonas simiae |
| 55 | 154359 | 154583 | + | NZ_CP006954.1 | Bibersteinia trehalosi USDA-ARS-USMARC-188 |
| 56 | 3759715 | 3759918 | - | NZ_AP014545.1 | Amphritea japonica ATCC BAA-1530 |
| 57 | 492787 | 493026 | - | NC_016901.1 | Shewanella baltica OS678 |
| 58 | 3298163 | 3298414 | - | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 59 | 249513 | 249749 | + | NZ_CP044069.1 | Vibrio vulnificus |
| 60 | 78524 | 78766 | + | NZ_AP019651.1 | Vibrio taketomensis |
| 61 | 104086 | 104337 | + | NZ_AP018689.1 | Vibrio aphrogenes |
| 62 | 2517301 | 2517549 | - | NZ_CP035688.1 | Vibrio metoecus |
| 63 | 1861852 | 1862103 | + | NZ_CP019706.1 | Pantoea alhagi |
| 64 | 2811468 | 2811734 | - | NZ_CP009977.1 | Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 |
| 65 | 3059271 | 3059504 | - | NZ_CP045350.1 | Vibrio aquimaris |
| 66 | 3703913 | 3704146 | + | NZ_CP069213.1 | Shewanella litorisediminis |
| 67 | 516733 | 516984 | - | NZ_CP041036.1 | Shewanella polaris |
| 68 | 3249570 | 3249818 | + | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 69 | 4130579 | 4130779 | + | NZ_CP036422.1 | Halioglobus maricola |
| 70 | 1893633 | 1893851 | - | NZ_CP019343.1 | Oceanicoccus sagamiensis |
| 71 | 2859333 | 2859581 | - | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 72 | 873780 | 874034 | - | NC_010995.1 | Cellvibrio japonicus Ueda107 |
| 73 | 1181108 | 1181314 | + | NZ_CP065534.1 | Lonsdalea populi |
| 74 | 545186 | 545425 | - | NZ_CP037952.1 | Parashewanella spongiae |
| 75 | 3774818 | 3775048 | + | NZ_CP022272.1 | Shewanella marisflavi |
| 76 | 4025915 | 4026145 | + | NC_009092.1 | Shewanella loihica PV-4 |
| 77 | 2260095 | 2260325 | + | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 78 | 2330073 | 2330294 | - | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 79 | 3994607 | 3994813 | - | NZ_CP061511.1 | Mixta calida |
| 80 | 538716 | 538961 | - | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 81 | 3142931 | 3143185 | + | NZ_CP051180.1 | Ferrimonas lipolytica |
| 82 | 291719 | 291940 | + | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 83 | 973120 | 973353 | - | NZ_CP014544.1 | Zhongshania aliphaticivorans |
| 84 | 681266 | 681520 | - | NZ_CP014544.1 | Zhongshania aliphaticivorans |
| 85 | 4408565 | 4408810 | + | NZ_CP020472.1 | Shewanella japonica |
| 86 | 1603160 | 1603384 | + | NZ_LT906448.1 | Pasteurella dagmatis |
| 87 | 927149 | 927394 | - | NZ_CP014671.1 | Immundisolibacter cernigliae |
| 88 | 3431996 | 3432247 | - | NZ_CP028271.1 | Mixta intestinalis |
| 89 | 2665446 | 2665685 | + | NZ_CP041783.1 | Shewanella donghaensis |
| 90 | 332642 | 332890 | - | NZ_CP004387.1 | Alcanivorax pacificus W11-5 |
| 91 | 469716 | 469955 | - | NC_011566.1 | Shewanella piezotolerans WP3 |
| 92 | 197949 | 198200 | - | NZ_CP040602.1 | Thiomicrorhabdus sediminis |
| 93 | 528723 | 528956 | - | NZ_CP068551.1 | Pseudomonas khazarica |
| 94 | 699475 | 699699 | + | NZ_CP015029.1 | Frederiksenia canicola |
| 95 | 3568784 | 3569035 | - | NZ_LN907827.1 | Erwinia gerundensis |
| 96 | 4610258 | 4610527 | + | NC_009901.1 | Shewanella pealeana ATCC 700345 |
| 97 | 1902969 | 1903196 | - | NZ_CP016604.1 | Otariodibacter oris |
| 98 | 3685332 | 3685589 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 99 | 2496429 | 2496668 | - | NZ_CP034759.1 | Litorilituus sediminis |
| 100 | 602977 | 603222 | - | NZ_CP046378.1 | Shewanella algae |
| 101 | 4042662 | 4042865 | + | NZ_CP049115.1 | Pantoea stewartii |
| 102 | 419759 | 420025 | - | NC_008709.1 | Psychromonas ingrahamii 37 |
| 103 | 286789 | 287007 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 104 | 660676 | 660948 | - | NC_007963.1 | Chromohalobacter salexigens DSM 3043 |
| 105 | 4389082 | 4389348 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 106 | 204814 | 205050 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 107 | 98674 | 98904 | + | NZ_HG916765.1 | Castellaniella defragrans 65Phen |
| 108 | 1283040 | 1283270 | + | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 109 | 649449 | 649679 | + | NZ_CP028926.1 | Pasteurella multocida |
| 110 | 466355 | 466582 | + | NC_006300.1 | [Mannheimia] succiniciproducens MBEL55E |
| 111 | 3490731 | 3490970 | + | NZ_CP014782.1 | Shewanella psychrophila |
| 112 | 71109 | 71336 | + | NZ_CP015031.1 | Basfia succiniciproducens |
| 113 | 2254631 | 2254837 | + | NZ_CP023009.1 | Lonsdalea britannica |
| 114 | 4298488 | 4298739 | - | NZ_CP026377.1 | Mixta gaviniae |
| 115 | 4317655 | 4317894 | + | NC_014012.1 | Shewanella violacea DSS12 |
| 116 | 143362 | 143583 | - | NZ_CP016440.1 | Bordetella pseudohinzii |
| 117 | 1763217 | 1763438 | - | NZ_CP021395.1 | Bordetella hinzii |
| 118 | 4294185 | 4294445 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 119 | 739718 | 739969 | - | NC_010506.1 | Shewanella woodyi ATCC 51908 |
| 120 | 4136893 | 4137147 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 121 | 1263655 | 1263858 | + | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 122 | 2824977 | 2825225 | - | NZ_CP033078.1 | Vibrio zhugei |
| 123 | 3212325 | 3212561 | + | NZ_CP051183.1 | Bermanella marisrubri |
| 124 | 3308089 | 3308289 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 125 | 4453939 | 4454193 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 126 | 2793396 | 2793602 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 127 | 2387849 | 2388052 | - | NZ_CP007445.1 | Gilliamella apicola |
| 128 | 5086983 | 5087240 | - | NZ_CP015839.1 | Marinobacterium aestuarii |
| 129 | 1315976 | 1316185 | + | NZ_CP025799.1 | Dickeya zeae |
| 130 | 876160 | 876429 | - | NZ_CP014143.1 | Microbulbifer aggregans |
| 131 | 3759826 | 3760032 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 132 | 3268345 | 3268551 | + | NZ_CP026047.1 | Raoultella planticola |
| 133 | 3952107 | 3952313 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 134 | 3307963 | 3308217 | - | NZ_CP038469.1 | Citrobacter tructae |
| 135 | 2296222 | 2296476 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 136 | 2794158 | 2794412 | + | NZ_CP033744.1 | Citrobacter freundii |
| 137 | 3801818 | 3802024 | - | NZ_CP041247.1 | Raoultella electrica |
| 138 | 3016860 | 3017102 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 139 | 2062212 | 2062430 | + | NZ_CP021377.1 | Oceanisphaera profunda |
| 140 | 1387944 | 1388147 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 141 | 192914 | 193168 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 142 | 141096 | 141323 | - | NC_010170.1 | Bordetella petrii |
| 143 | 1725914 | 1726147 | + | NZ_CP022684.1 | Ketobacter alkanivorans |
| 144 | 4362593 | 4362796 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 145 | 3386114 | 3386368 | + | NZ_CP021435.1 | Halomonas beimenensis |
| 146 | 4349791 | 4350054 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 147 | 1402506 | 1402718 | - | NZ_CP042382.1 | Pistricoccus aurantiacus |
| 148 | 1557990 | 1558196 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 149 | 4092700 | 4092906 | - | NZ_CP050508.1 | Raoultella terrigena |
| 150 | 3139529 | 3139768 | + | NZ_CP031093.1 | Hydrocarboniclastica marina |
| 151 | 2495905 | 2496108 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 152 | 3173928 | 3174167 | - | NC_018868.3 | Simiduia agarivorans SA1 = DSM 21679 |
| 153 | 4201894 | 4202100 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 154 | 1782126 | 1782401 | + | NZ_CP038033.1 | Nitrosococcus wardiae |
| 155 | 3726465 | 3726707 | - | NZ_CP036536.1 | Salinimonas lutimaris |
| 156 | 514264 | 514509 | - | NZ_CP013189.1 | Pseudohongiella spirulinae |
| 157 | 3977975 | 3978181 | - | NZ_CP054254.1 | Klebsiella variicola |
| 158 | 2810456 | 2810695 | + | NZ_CP022987.1 | Pusillimonas thiosulfatoxidans |
| 159 | 1214142 | 1214345 | + | NZ_CP023567.1 | Erwinia pyrifoliae |
| 160 | 2502090 | 2502308 | + | NZ_CP021376.1 | Oceanisphaera avium |
| 161 | 3322041 | 3322289 | + | NZ_CP011412.1 | Sedimenticola thiotaurini |
| 162 | 4941666 | 4941911 | - | NC_023018.2 | Pandoraea pnomenusa |
| 163 | 3947215 | 3947460 | - | NZ_CP015581.1 | Tatumella citrea |
| 164 | 2432734 | 2433000 | - | NZ_CP023559.1 | Salinicola tamaricis |
| 165 | 427384 | 427599 | + | NZ_CP046670.1 | Alteromonas mediterranea |
| 166 | 540610 | 540858 | + | NZ_CP014322.1 | Alteromonas addita |
| 167 | 3798129 | 3798383 | - | NZ_CP012621.1 | Zobellella denitrificans |
| 168 | 2759686 | 2759937 | - | NZ_CP021358.1 | Kushneria marisflavi |
| 169 | 548520 | 548768 | + | NZ_CP021323.1 | Kushneria konosiri |
| 170 | 73308 | 73559 | + | NZ_CP007031.1 | Marichromatium purpuratum 984 |
| 171 | 320328 | 320585 | - | NZ_LR134510.1 | Actinobacillus delphinicola |
| 172 | 557630 | 557854 | + | NZ_CP009888.1 | Pseudoalteromonas piratica |
| 173 | 4079478 | 4079690 | - | NZ_CP019650.1 | Microbulbifer agarilyticus |
| 174 | 4509106 | 4509339 | + | NZ_CP013124.1 | Pseudomonas mendocina S5.2 |
| 175 | 527903 | 528142 | - | NC_007954.1 | Shewanella denitrificans OS217 |
| 176 | 1375223 | 1375447 | - | NC_011852.1 | Glaesserella parasuis SH0165 |
| 177 | 2966231 | 2966455 | + | NZ_CP011039.1 | Pseudoalteromonas spongiae UST010723-006 |
| 178 | 77804 | 78073 | + | NC_021291.1 | Spiribacter salinus M19-40 |
| 179 | 806944 | 807171 | + | NZ_LR134167.1 | Avibacterium volantium |
| 180 | 134188 | 134388 | - | NZ_CP017689.1 | Thalassotalea crassostreae |
| 181 | 3088168 | 3088413 | + | NZ_LS483250.1 | Moritella yayanosii |
| 182 | 763395 | 763637 | + | NZ_AP012273.1 | Thiolapillus brandeum |
| 183 | 3597418 | 3597657 | - | NC_015554.1 | Alteromonas naphthalenivorans |
| 184 | 1098305 | 1098550 | + | NZ_CP072425.1 | Pseudoalteromonas viridis |
| 185 | 3900187 | 3900432 | - | NZ_CP044399.1 | Moritella marina ATCC 15381 |
| 186 | 641019 | 641288 | - | NZ_CP013106.1 | Halomonas huangheensis |
| 187 | 3911625 | 3911849 | - | NZ_CP053069.1 | Usitatibacter rugosus |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_007481.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01209.20 | 0.72 | 131 | 2371 | same-strand | ubiE/COQ5 methyltransferase family |
| 2 | PF13649.8 | 0.72 | 131 | 2371 | same-strand | Methyltransferase domain |
| 3 | PF08241.14 | 0.72 | 131 | 2371 | same-strand | Methyltransferase domain |
| 4 | PF13489.8 | 0.71 | 130 | 2371.0 | same-strand | Methyltransferase domain |
| 5 | PF08242.14 | 0.72 | 131 | 2371 | same-strand | Methyltransferase domain |
| 6 | PF02036.19 | 0.72 | 131 | 1714 | same-strand | SCP-2 sterol transfer family |
| 7 | PF03109.18 | 0.76 | 139 | 81.0 | same-strand | ABC1 atypical kinase-like domain |
| 8 | PF00902.20 | 0.9 | 165 | 451 | same-strand | Sec-independent protein translocase protein (TatC) |
++ More..