Result : Q3AJS3
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 50S ribosomal protein L28 |
| NCBI Accession ID | CP000110.1 |
| Organism | Synechococcus sp. (strain CC9605) |
| Left | 1320756 |
| Right | 1320992 |
| Strand | + |
| Nucleotide Sequence | ATGTCACGGGTGTGTCAGCTCACCGGTACTCGCGCCAACAACGGCATGGCTGTGAGCCATTCCCACATCCGCACCAAGAAGCTGCAGCAGGCCAACCTGCAGCAGCGTCGCCTCTGGTGGGCCGAAGGCAACCGCTGGGTGAAGCTTCGCGTCACCACCCGCGCCCTAAAAACTATCCAGAAGAAAGGCCTCGGCGCCTATGCCAAGTCTCTGGGCATTAACCTGGCCAAGATCTGA |
| Sequence | MSRVCQLTGTRANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGNRWVKLRVTTRALKTIQKKGLGAYAKSLGINLAKI |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl00367. Profile Description: Ribosomal L28 family. This model describes bacterial and chloroplast forms of the 50S ribosomal protein L28, a polypeptide about 60 amino acids in length. Mitochondrial homologs differ substantially in architecture (e.g. SP|P36525 from Saccharomyces cerevisiae, which is 258 amino acids long) and are not included. [Protein synthesis, Ribosomal proteins: synthesis and modification] |
| Pubmed ID | |
| Domain | CDD:412338 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q3AJS3 |
| ORF Length (Amino Acid) | 78 |
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| Conservation Analysis |
No. of Species: 75
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 641238 | 641474 | + | NC_019675.1 | Cyanobium gracile PCC 6307 |
| 2 | 847533 | 847769 | - | NC_005042.1 | Prochlorococcus marinus subsp. marinus str. CCMP1375 |
| 3 | 2921224 | 2921460 | + | NC_010296.1 | Microcystis aeruginosa NIES-843 |
| 4 | 2056241 | 2056477 | + | NC_019689.1 | Pleurocapsa sp. PCC 7327 |
| 5 | 981958 | 982194 | - | NC_019693.1 | Oscillatoria acuminata PCC 6304 |
| 6 | 2553959 | 2554195 | + | NZ_AP018202.1 | Thermostichus vulcanus NIES-2134 |
| 7 | 2576546 | 2576782 | + | NC_004113.1 | Thermosynechococcus vestitus BP-1 |
| 8 | 3103818 | 3104054 | - | NC_019748.1 | Stanieria cyanosphaera PCC 7437 |
| 9 | 1319266 | 1319502 | - | NZ_CP021983.2 | Halomicronema hongdechloris C2206 |
| 10 | 3627669 | 3627917 | + | NC_019776.1 | Cyanobacterium aponinum PCC 10605 |
| 11 | 4987001 | 4987237 | + | NZ_AP014638.1 | Leptolyngbya boryana IAM M-101 |
| 12 | 121297 | 121533 | - | NC_019780.1 | Dactylococcopsis salina PCC 8305 |
| 13 | 1027946 | 1028182 | + | NC_019771.1 | Anabaena cylindrica PCC 7122 |
| 14 | 1936427 | 1936663 | - | NC_019751.1 | Calothrix sp. PCC 6303 |
| 15 | 1250703 | 1250939 | - | NZ_CP018092.1 | Synechococcus lividus PCC 6715 |
| 16 | 1481508 | 1481744 | + | NZ_CP047242.1 | Trichormus variabilis 0441 |
| 17 | 1679515 | 1679751 | - | NC_014248.1 | 'Nostoc azollae' 0708 |
| 18 | 5096461 | 5096697 | - | NC_014501.1 | Gloeothece verrucosa PCC 7822 |
| 19 | 3525408 | 3525644 | + | NZ_CP060822.1 | Cylindrospermopsis curvispora GIHE-G1 |
| 20 | 1943062 | 1943298 | + | NC_019753.1 | Crinalium epipsammum PCC 9333 |
| 21 | 3172184 | 3172420 | + | NC_011729.1 | Gloeothece citriformis PCC 7424 |
| 22 | 2727967 | 2728203 | + | NC_009925.1 | Acaryochloris marina MBIC11017 |
| 23 | 2033125 | 2033361 | + | NC_019695.1 | Chroococcidiopsis thermalis PCC 7203 |
| 24 | 3686248 | 3686484 | + | NZ_CP031941.1 | Nostoc sphaeroides |
| 25 | 2784672 | 2784908 | + | NZ_CP042326.1 | Euhalothece natronophila Z-M001 |
| 26 | 4514647 | 4514883 | - | NZ_CP024785.1 | Nostoc flagelliforme CCNUN1 |
| 27 | 4706129 | 4706365 | + | NC_019729.1 | Oscillatoria nigro-viridis PCC 7112 |
| 28 | 582324 | 582560 | + | NZ_CP054698.1 | Nostoc edaphicum CCNP1411 |
| 29 | 561455 | 561691 | + | NC_016025.1 | Chloracidobacterium thermophilum B |
| 30 | 2661297 | 2661542 | - | NC_022600.1 | Gloeobacter kilaueensis JS1 |
| 31 | 1593974 | 1594210 | + | NZ_CP060711.1 | Thermomonas brevis |
| 32 | 5249536 | 5249772 | - | NZ_AP017422.1 | Filimonas lacunae |
| 33 | 4021886 | 4022122 | - | NZ_LT853882.1 | Xanthomonas fragariae |
| 34 | 290353 | 290589 | + | NZ_CP007810.1 | Xanthomonas oryzae pv. oryzicola |
| 35 | 4788835 | 4789071 | - | NZ_CP072268.1 | Xanthomonas euvesicatoria pv. alfalfae |
| 36 | 2629012 | 2629248 | - | NZ_CP018725.1 | Xanthomonas vesicatoria ATCC 35937 |
| 37 | 3283250 | 3283486 | - | NZ_CP016878.1 | Xanthomonas hortorum |
| 38 | 4049442 | 4049678 | + | NZ_CP016172.1 | Bordetella flabilis |
| 39 | 6224445 | 6224681 | + | NC_013440.1 | Haliangium ochraceum DSM 14365 |
| 40 | 4664622 | 4664858 | - | NZ_CP058243.1 | Xanthomonas campestris pv. raphani |
| 41 | 170334 | 170570 | + | NZ_CP033326.1 | Xanthomonas cucurbitae |
| 42 | 4634762 | 4634998 | - | NZ_CP028127.1 | Xanthomonas vasicola pv. vasculorum |
| 43 | 4869649 | 4869885 | - | NZ_CP048044.1 | Xanthomonas citri |
| 44 | 204296 | 204532 | + | NZ_CP023406.1 | Luteimonas chenhongjianii |
| 45 | 2416477 | 2416713 | - | NZ_CP043476.1 | Xanthomonas hyacinthi |
| 46 | 851006 | 851242 | - | NZ_AP018558.1 | Hydrogenophilus thermoluteolus |
| 47 | 254365 | 254601 | + | NZ_CP029843.1 | Lysobacter maris |
| 48 | 584054 | 584290 | + | NC_004556.1 | Xylella fastidiosa Temecula1 |
| 49 | 736365 | 736601 | + | NZ_CP053627.1 | Xylella taiwanensis |
| 50 | 567115 | 567351 | - | NC_016043.1 | Taylorella asinigenitalis MCE3 |
| 51 | 2613496 | 2613735 | + | NZ_CP028136.1 | Gramella fulva |
| 52 | 541923 | 542159 | - | NZ_CP021060.1 | Taylorella equigenitalis |
| 53 | 3376971 | 3377207 | - | NZ_CP010817.1 | Myroides profundi |
| 54 | 2163084 | 2163320 | - | NC_017025.1 | Flavobacterium indicum GPTSA100-9 = DSM 17447 |
| 55 | 3418753 | 3418989 | + | NZ_AP021884.1 | Sulfuriferula plumbiphila |
| 56 | 5320413 | 5320637 | - | NZ_CP012159.1 | Chondromyces crocatus |
| 57 | 650386 | 650610 | - | NZ_CP016211.1 | Minicystis rosea |
| 58 | 588105 | 588341 | - | NZ_CP039934.1 | Myroides fluvii |
| 59 | 2192056 | 2192292 | + | NZ_CP029556.1 | Lysobacter oculi |
| 60 | 141120 | 141356 | + | NZ_CP046570.1 | Xanthomonas albilineans |
| 61 | 579245 | 579481 | - | NZ_CP039456.1 | Changchengzhania lutea |
| 62 | 438073 | 438306 | + | NZ_LR134313.1 | Neisseria canis |
| 63 | 417139 | 417375 | - | NC_015581.1 | Thiomicrospira cyclica ALM1 |
| 64 | 369724 | 369960 | - | NZ_CP007030.1 | Thiomicrospira aerophila AL3 |
| 65 | 702322 | 702558 | + | NC_013959.1 | Sideroxydans lithotrophicus ES-1 |
| 66 | 6256210 | 6256434 | + | NC_010162.1 | Sorangium cellulosum So ce56 |
| 67 | 2182682 | 2182918 | - | NZ_AP018721.1 | Sulfuritortus calidifontis |
| 68 | 619409 | 619645 | + | NZ_AP018738.1 | Ferriphaselus amnicola |
| 69 | 2459548 | 2459784 | - | NC_014394.1 | Gallionella capsiferriformans ES-2 |
| 70 | 2649414 | 2649650 | + | NC_017857.3 | Methylophaga nitratireducenticrescens |
| 71 | 1194269 | 1194502 | - | NC_008825.1 | Methylibium petroleiphilum PM1 |
| 72 | 1289529 | 1289768 | - | NZ_CP018153.1 | Gramella salexigens |
| 73 | 2388483 | 2388722 | - | NC_008571.1 | Gramella forsetii KT0803 |
| 74 | 1076915 | 1077151 | + | NZ_CP007142.1 | Gynuella sunshinyii YC6258 |
| 75 | 2887331 | 2887570 | + | NZ_CP016359.1 | Gramella flava JLT2011 |
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