Result : Q3AJ96
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 50S ribosomal protein L33 2 |
| NCBI Accession ID | CP000110.1 |
| Organism | Synechococcus sp. (strain CC9605) |
| Left | 1457775 |
| Right | 1457975 |
| Strand | + |
| Nucleotide Sequence | ATGGCCAAAAGCAAAGGCGTTCGCATCATTGTCACACTCGAATGCACCGAATGCAGAACAGCAACTGCTGCTGAAAAACGCAGTCCTGGAGTCTCTCGCTATACAACAACTAAAAACCGAAGAAACAATCTTGAAAGGCTCGAACTGATGAAATTCTGCCCACAACTCAACAGAATGACTCTTCATCGCGAAATAAAATAG |
| Sequence | MAKSKGVRIIVTLECTECRTATAAEKRSPGVSRYTTTKNRRNNLERLELMKFCPQLNRMTLHREIK |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl00383. Profile Description: Ribosomal protein L33. This model describes bacterial ribosomal protein L33 and its chloroplast and mitochondrial equivalents. [Protein synthesis, Ribosomal proteins: synthesis and modification] |
| Pubmed ID | |
| Domain | CDD:412348 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q3AJ96 |
| ORF Length (Amino Acid) | 66 |
++ More..
| Conservation Analysis |
No. of Species: 278
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3098218 | 3098412 | + | NZ_CP060822.1 | Cylindrospermopsis curvispora GIHE-G1 |
| 2 | 889575 | 889772 | + | NC_005042.1 | Prochlorococcus marinus subsp. marinus str. CCMP1375 |
| 3 | 2909494 | 2909688 | + | NZ_CP047242.1 | Trichormus variabilis 0441 |
| 4 | 561178 | 561372 | - | NC_019675.1 | Cyanobium gracile PCC 6307 |
| 5 | 1066955 | 1067149 | - | NZ_CP054698.1 | Nostoc edaphicum CCNP1411 |
| 6 | 5296983 | 5297177 | + | NC_014248.1 | 'Nostoc azollae' 0708 |
| 7 | 3495 | 3689 | + | NC_019751.1 | Calothrix sp. PCC 6303 |
| 8 | 4487007 | 4487201 | - | NZ_CP031941.1 | Nostoc sphaeroides |
| 9 | 6120888 | 6121082 | - | NC_010628.1 | Nostoc punctiforme PCC 73102 |
| 10 | 3314633 | 3314827 | + | NZ_CP024785.1 | Nostoc flagelliforme CCNUN1 |
| 11 | 1648509 | 1648703 | + | NZ_AP014638.1 | Leptolyngbya boryana IAM M-101 |
| 12 | 2336401 | 2336595 | - | NC_019695.1 | Chroococcidiopsis thermalis PCC 7203 |
| 13 | 5906807 | 5907001 | - | NC_019771.1 | Anabaena cylindrica PCC 7122 |
| 14 | 1898409 | 1898597 | + | NZ_CP021983.2 | Halomicronema hongdechloris C2206 |
| 15 | 4721390 | 4721584 | - | NC_019689.1 | Pleurocapsa sp. PCC 7327 |
| 16 | 4405543 | 4405737 | + | NC_010296.1 | Microcystis aeruginosa NIES-843 |
| 17 | 2489848 | 2490042 | - | NC_014501.1 | Gloeothece verrucosa PCC 7822 |
| 18 | 3711501 | 3711695 | + | NC_019748.1 | Stanieria cyanosphaera PCC 7437 |
| 19 | 3459818 | 3460012 | - | NC_011729.1 | Gloeothece citriformis PCC 7424 |
| 20 | 1392526 | 1392720 | - | NC_019780.1 | Dactylococcopsis salina PCC 8305 |
| 21 | 187403 | 187597 | + | NC_019776.1 | Cyanobacterium aponinum PCC 10605 |
| 22 | 2361896 | 2362090 | - | NZ_CP042326.1 | Euhalothece natronophila Z-M001 |
| 23 | 1420710 | 1420898 | - | NC_019693.1 | Oscillatoria acuminata PCC 6304 |
| 24 | 3609806 | 3609997 | - | NC_022600.1 | Gloeobacter kilaueensis JS1 |
| 25 | 2512743 | 2512925 | + | NC_011026.1 | Chloroherpeton thalassium ATCC 35110 |
| 26 | 2508650 | 2508838 | + | NC_019729.1 | Oscillatoria nigro-viridis PCC 7112 |
| 27 | 2455283 | 2455468 | + | NC_020156.1 | Nonlabens dokdonensis DSW-6 |
| 28 | 106078 | 106263 | + | NZ_CP017478.1 | Urechidicola croceus |
| 29 | 700612 | 700806 | + | NZ_CP018092.1 | Synechococcus lividus PCC 6715 |
| 30 | 550318 | 550506 | + | NZ_CP013195.1 | Prevotella enoeca |
| 31 | 1223866 | 1224054 | + | NZ_CP054012.1 | Parabacteroides distasonis |
| 32 | 4251637 | 4251831 | + | NC_019753.1 | Crinalium epipsammum PCC 9333 |
| 33 | 1036425 | 1036586 | - | NZ_LT906459.1 | Odoribacter splanchnicus |
| 34 | 868469 | 868654 | - | NZ_CP013355.1 | Lutibacter profundi |
| 35 | 3252840 | 3253031 | - | NC_005125.1 | Gloeobacter violaceus PCC 7421 |
| 36 | 882463 | 882654 | + | NC_014033.1 | Prevotella ruminicola 23 |
| 37 | 4849255 | 4849443 | - | NC_009925.1 | Acaryochloris marina MBIC11017 |
| 38 | 3376912 | 3377094 | - | NZ_CP032157.1 | Paraflavitalea soli |
| 39 | 476225 | 476413 | - | NC_014371.1 | Prevotella melaninogenica ATCC 25845 |
| 40 | 416860 | 417048 | + | NZ_CP023864.1 | Prevotella jejuni |
| 41 | 2013541 | 2013702 | - | NZ_LR134384.1 | Prevotella oris |
| 42 | 582476 | 582664 | + | NZ_CP015402.2 | Muribaculum intestinale |
| 43 | 4804639 | 4804824 | - | NZ_CP013118.1 | Salinivirga cyanobacteriivorans |
| 44 | 527158 | 527346 | + | NZ_CP024728.1 | Prevotella intermedia |
| 45 | 1146479 | 1146667 | + | NZ_LT608328.1 | Petrimonas mucosa |
| 46 | 3221784 | 3221972 | - | NZ_CP069450.1 | Butyricimonas virosa |
| 47 | 876564 | 876752 | - | NZ_CP032819.1 | Butyricimonas faecalis |
| 48 | 1159515 | 1159697 | - | NZ_CP011390.1 | Flavisolibacter tropicus |
| 49 | 2107525 | 2107686 | - | NC_010729.1 | Porphyromonas gingivalis ATCC 33277 |
| 50 | 1274666 | 1274854 | - | NZ_CP009621.1 | Pontibacter korlensis |
| 51 | 3189299 | 3189487 | - | NZ_CP047984.1 | Pontibacter russatus |
| 52 | 612073 | 612234 | + | NZ_LR215980.1 | Paraprevotella xylaniphila YIT 11841 |
| 53 | 2409270 | 2409452 | - | NC_014759.1 | Marivirga tractuosa DSM 4126 |
| 54 | 524852 | 525034 | - | NC_015167.1 | Cellulophaga lytica DSM 7489 |
| 55 | 2309521 | 2309715 | + | NZ_AP018202.1 | Thermostichus vulcanus NIES-2134 |
| 56 | 2142349 | 2142543 | + | NC_004113.1 | Thermosynechococcus vestitus BP-1 |
| 57 | 3229036 | 3229197 | + | NZ_CP045696.1 | Sodaliphilus pleomorphus |
| 58 | 2116420 | 2116608 | + | NC_015501.1 | Porphyromonas asaccharolytica DSM 20707 |
| 59 | 1112099 | 1112281 | - | NZ_CP042433.1 | Flavisolibacter ginsenosidimutans |
| 60 | 3300407 | 3300589 | + | NZ_CP022957.1 | Maribacter cobaltidurans |
| 61 | 3072695 | 3072883 | - | NZ_CP048106.1 | Pontibacter pudoricolor |
| 62 | 1988931 | 1989119 | - | NZ_LS483447.1 | Porphyromonas crevioricanis |
| 63 | 3798826 | 3799008 | + | NZ_CP012836.1 | Algoriphagus sanaruensis |
| 64 | 3109711 | 3109893 | + | NZ_CP012040.1 | Cyclobacterium amurskyense |
| 65 | 3099786 | 3099968 | + | NC_015914.1 | Cyclobacterium marinum DSM 745 |
| 66 | 1525117 | 1525299 | + | NC_007512.1 | Pelodictyon luteolum DSM 273 |
| 67 | 1399471 | 1399653 | + | NZ_CP034549.1 | Nonlabens ponticola |
| 68 | 1933432 | 1933620 | - | NZ_CP007035.1 | Niabella soli DSM 19437 |
| 69 | 1693408 | 1693590 | - | NZ_CP019342.1 | Nonlabens tegetincola |
| 70 | 1391974 | 1392162 | + | NZ_CP069440.1 | Phocaeicola coprophilus |
| 71 | 4111123 | 4111311 | + | NC_009614.1 | Phocaeicola vulgatus ATCC 8482 |
| 72 | 4519227 | 4519415 | + | NZ_LR699004.1 | Phocaeicola dorei |
| 73 | 2405212 | 2405394 | - | NZ_CP030041.1 | Echinicola strongylocentroti |
| 74 | 870392 | 870580 | + | NZ_LT605205.1 | Proteiniphilum saccharofermentans |
| 75 | 2842311 | 2842499 | - | NZ_CP015772.1 | Niabella ginsenosidivorans |
| 76 | 3577056 | 3577238 | + | NZ_CP024091.1 | Pedobacter ginsengisoli |
| 77 | 993801 | 993989 | + | NZ_LR134506.1 | Porphyromonas cangingivalis |
| 78 | 4704692 | 4704880 | - | NZ_CP040530.1 | Bacteroides thetaiotaomicron |
| 79 | 4362203 | 4362391 | - | NZ_CP021904.1 | Alkalitalea saponilacus |
| 80 | 2976825 | 2977013 | + | NZ_CP007034.1 | Barnesiella viscericola DSM 18177 |
| 81 | 1289320 | 1289502 | - | NZ_CP018153.1 | Gramella salexigens |
| 82 | 2388274 | 2388456 | - | NC_008571.1 | Gramella forsetii KT0803 |
| 83 | 616873 | 617061 | + | NC_015164.1 | Phocaeicola salanitronis DSM 18170 |
| 84 | 1531405 | 1531587 | + | NZ_CP007202.1 | Siansivirga zeaxanthinifaciens CC-SAMT-1 |
| 85 | 458604 | 458792 | - | NZ_CP027231.1 | Bacteroides zoogleoformans |
| 86 | 2773709 | 2773897 | + | NC_014933.1 | Bacteroides helcogenes P 36-108 |
| 87 | 1994271 | 1994459 | + | NZ_CP015401.2 | Bacteroides caecimuris |
| 88 | 4192087 | 4192269 | + | NC_013061.1 | Pedobacter heparinus DSM 2366 |
| 89 | 2843272 | 2843460 | - | NZ_LN877293.1 | Bacteroides fragilis |
| 90 | 914708 | 914896 | + | NZ_CP012938.1 | Bacteroides ovatus |
| 91 | 449345 | 449527 | - | NZ_CP058595.1 | Costertonia aggregata |
| 92 | 1369875 | 1370057 | - | NC_016599.1 | Owenweeksia hongkongensis DSM 17368 |
| 93 | 5283392 | 5283574 | + | NZ_CP032869.1 | Mucilaginibacter celer |
| 94 | 4398047 | 4398229 | + | NZ_CP071878.1 | Mucilaginibacter gossypii |
| 95 | 2768905 | 2769087 | + | NC_014934.1 | Cellulophaga algicola DSM 14237 |
| 96 | 235420 | 235602 | - | NZ_CP054494.1 | Flavobacterium columnare |
| 97 | 1934754 | 1934936 | + | NZ_CP028811.1 | Flavobacterium magnum |
| 98 | 2064103 | 2064285 | + | NZ_CP029187.1 | Flavobacterium pallidum |
| 99 | 2465010 | 2465192 | + | NC_016001.1 | Flavobacterium branchiophilum FL-15 |
| 100 | 3967632 | 3967814 | - | NZ_CP029186.1 | Flavobacterium album |
| 101 | 2894488 | 2894670 | + | NZ_CP016907.1 | Flavobacterium anhuiense |
| 102 | 5794718 | 5794900 | - | NZ_CP029255.1 | Flavobacterium crocinum |
| 103 | 6020003 | 6020185 | - | NC_009441.1 | Flavobacterium johnsoniae UW101 |
| 104 | 2319584 | 2319766 | + | NC_018018.1 | Bernardetia litoralis DSM 6794 |
| 105 | 732848 | 733030 | - | NC_015844.1 | Zobellia galactanivorans |
| 106 | 886447 | 886629 | + | NZ_CP055153.1 | Adhaeribacter radiodurans |
| 107 | 3215749 | 3215931 | - | NC_013222.1 | Robiginitalea biformata HTCC2501 |
| 108 | 1129405 | 1129587 | + | NZ_CP048222.1 | Rhodocytophaga rosea |
| 109 | 3903724 | 3903912 | - | NZ_CP010777.1 | Rufibacter radiotolerans |
| 110 | 2887591 | 2887773 | + | NZ_CP016359.1 | Gramella flava JLT2011 |
| 111 | 2613757 | 2613939 | + | NZ_CP028136.1 | Gramella fulva |
| 112 | 1349050 | 1349232 | - | NZ_CP025791.1 | Flavivirga eckloniae |
| 113 | 2184843 | 2185025 | + | NZ_CP061703.1 | Mesoflavibacter profundi |
| 114 | 320047 | 320235 | - | NC_015177.1 | Pseudopedobacter saltans DSM 12145 |
| 115 | 1642750 | 1642932 | + | NZ_CP032050.1 | Euzebyella marina |
| 116 | 1079812 | 1080000 | - | NZ_CP027234.1 | Bacteroides heparinolyticus |
| 117 | 505652 | 505840 | - | NZ_CP012075.1 | Prevotella fusca JCM 17724 |
| 118 | 3574196 | 3574378 | + | NZ_CP040812.1 | Antarcticibacterium flavum |
| 119 | 1160686 | 1160868 | + | NZ_CP053348.1 | Winogradskyella forsetii |
| 120 | 1847629 | 1847811 | + | NZ_CP053352.1 | Winogradskyella helgolandensis |
| 121 | 1083628 | 1083810 | + | NZ_CP053351.1 | Winogradskyella schleiferi |
| 122 | 1604316 | 1604504 | - | NZ_CP012643.1 | Rufibacter tibetensis |
| 123 | 652846 | 653028 | - | NC_019904.1 | Echinicola vietnamensis DSM 17526 |
| 124 | 565770 | 565952 | - | NZ_CP040106.1 | Echinicola rosea |
| 125 | 5468966 | 5469148 | - | NZ_AP017313.1 | Mucilaginibacter gotjawali |
| 126 | 4258581 | 4258763 | - | NZ_CP042437.1 | Mucilaginibacter ginsenosidivorax |
| 127 | 1434690 | 1434872 | + | NZ_CP017688.1 | Flavobacterium crassostreae |
| 128 | 850409 | 850591 | - | NZ_CP055156.1 | Adhaeribacter swui |
| 129 | 3821690 | 3821872 | - | NZ_CP020919.1 | Flavobacterium kingsejongi |
| 130 | 3270781 | 3270963 | - | NC_014655.1 | Leadbetterella byssophila DSM 17132 |
| 131 | 1674676 | 1674858 | + | NC_010803.1 | Chlorobium limicola DSM 245 |
| 132 | 227484 | 227666 | - | NC_018010.1 | Belliella baltica DSM 15883 |
| 133 | 1825019 | 1825201 | + | NZ_CP013909.1 | Hymenobacter sedentarius |
| 134 | 4869596 | 4869778 | + | NZ_CP022743.1 | Mucilaginibacter xinganensis |
| 135 | 5249292 | 5249474 | - | NZ_AP017422.1 | Filimonas lacunae |
| 136 | 355191 | 355373 | - | NZ_CP025938.1 | Tamlana carrageenivorans |
| 137 | 940419 | 940601 | + | NZ_CP063145.1 | Cruoricaptor ignavus |
| 138 | 426964 | 427146 | + | NZ_CP014224.1 | Wenyingzhuangia fucanilytica |
| 139 | 3703405 | 3703587 | - | NZ_LT899436.1 | Tenacibaculum jejuense |
| 140 | 1352793 | 1352975 | + | NC_014041.1 | Zunongwangia profunda SM-A87 |
| 141 | 1718308 | 1718490 | - | NZ_CP042476.1 | Antarcticibacterium arcticum |
| 142 | 3726145 | 3726327 | - | NZ_CP037755.1 | Pseudocnuella soli |
| 143 | 3337814 | 3338002 | + | NZ_CP047897.1 | Nibribacter ruber |
| 144 | 2354439 | 2354621 | - | NZ_CP066775.1 | Mucilaginibacter ginkgonis |
| 145 | 1740072 | 1740260 | - | NZ_CP014766.1 | Pontibacter akesuensis |
| 146 | 4321200 | 4321382 | + | NZ_CP060723.1 | Pedobacter roseus |
| 147 | 3965959 | 3966141 | + | NZ_CP012898.1 | Algibacter alginicilyticus |
| 148 | 1078860 | 1079042 | + | NZ_CP044285.1 | Hymenobacter baengnokdamensis |
| 149 | 2463144 | 2463326 | + | NZ_CP011071.1 | Muricauda lutaonensis |
| 150 | 3934655 | 3934837 | - | NZ_CP042831.1 | Flavobacterium alkalisoli |
| 151 | 820040 | 820222 | + | NZ_CP049246.1 | Sphingobacterium lactis |
| 152 | 30900 | 31082 | + | NZ_CP030848.1 | Sphingobacterium hotanense |
| 153 | 31204 | 31386 | + | NZ_LR590470.1 | Sphingobacterium daejeonense |
| 154 | 2186260 | 2186442 | + | NZ_CP042436.1 | Mucilaginibacter ginsenosidivorans |
| 155 | 1736095 | 1736277 | - | NZ_LR590484.1 | Sphingobacterium thalpophilum |
| 156 | 2356670 | 2356852 | - | NZ_CP019352.1 | Lacinutrix venerupis |
| 157 | 2805599 | 2805781 | + | NZ_CP030104.1 | Flagellimonas maritima |
| 158 | 2419197 | 2419379 | + | NC_015945.1 | Muricauda ruestringensis DSM 13258 |
| 159 | 2193044 | 2193226 | + | NZ_CP020918.1 | Flavobacterium faecale |
| 160 | 2095693 | 2095875 | - | NZ_CP022378.1 | Capnocytophaga cynodegmi |
| 161 | 2932395 | 2932577 | - | NC_014230.1 | Croceibacter atlanticus HTCC2559 |
| 162 | 3814130 | 3814312 | + | NZ_CP033929.1 | Chryseobacterium indoltheticum |
| 163 | 2949345 | 2949527 | - | NZ_CP015199.1 | Chryseobacterium glaciei |
| 164 | 2298830 | 2299012 | + | NZ_CP033926.1 | Chryseobacterium joostei |
| 165 | 163473 | 163655 | + | NZ_CP033932.1 | Chryseobacterium bernardetii |
| 166 | 2377066 | 2377248 | - | NZ_CP033920.1 | Chryseobacterium carnipullorum |
| 167 | 4773053 | 4773235 | + | NZ_LR134386.1 | Chryseobacterium nakagawai |
| 168 | 226649 | 226831 | + | NZ_CP033924.1 | Chryseobacterium lactis |
| 169 | 678417 | 678599 | - | NZ_LT906449.1 | Capnocytophaga haemolytica |
| 170 | 515393 | 515575 | + | NZ_CP018155.1 | Tenacibaculum todarodis |
| 171 | 3659199 | 3659387 | + | NZ_CP021235.1 | Pontibacter actiniarum |
| 172 | 4335571 | 4335753 | + | NZ_CP007451.1 | Draconibacterium orientale |
| 173 | 631639 | 631821 | + | NZ_CP022387.1 | Capnocytophaga stomatis |
| 174 | 1499383 | 1499565 | + | NZ_CP034930.1 | Apibacter raozihei |
| 175 | 2853249 | 2853431 | + | NZ_LR134441.1 | Kaistella antarctica |
| 176 | 1685661 | 1685843 | - | NZ_CP034159.1 | Kaistella carnis |
| 177 | 1603426 | 1603608 | - | NZ_LR134503.1 | Kaistella jeonii |
| 178 | 3281654 | 3281836 | + | NZ_CP023777.1 | Chitinophaga caeni |
| 179 | 3724128 | 3724310 | + | NZ_CP029145.1 | Hymenobacter nivis |
| 180 | 3910767 | 3910949 | + | NZ_CP054139.1 | Mucilaginibacter mali |
| 181 | 2509343 | 2509525 | + | NZ_CP029463.1 | Flavobacterium sediminis |
| 182 | 579037 | 579219 | - | NZ_CP039456.1 | Changchengzhania lutea |
| 183 | 2557057 | 2557239 | + | NC_013162.1 | Capnocytophaga ochracea DSM 7271 |
| 184 | 497772 | 497954 | - | NZ_CP022379.1 | Capnocytophaga sputigena |
| 185 | 2506646 | 2506828 | - | NZ_CP022022.1 | Capnocytophaga endodontalis |
| 186 | 1990531 | 1990713 | - | NZ_CP048113.1 | Chitinophaga agri |
| 187 | 3804825 | 3805007 | + | NC_013132.1 | Chitinophaga pinensis DSM 2588 |
| 188 | 32993 | 33175 | - | NZ_CP031188.1 | Flavobacterium arcticum |
| 189 | 223425 | 223607 | + | NZ_CP038029.1 | Sphingobacterium psychroaquaticum |
| 190 | 1487464 | 1487646 | + | NC_017045.1 | Riemerella anatipestifer ATCC 11845 = DSM 15868 |
| 191 | 2641127 | 2641309 | + | NZ_CP019419.1 | Polaribacter reichenbachii |
| 192 | 2628282 | 2628464 | + | NZ_LR134289.1 | Chryseobacterium gleum |
| 193 | 2024901 | 2025083 | + | NZ_CP041637.1 | Formosa sediminum |
| 194 | 330267 | 330449 | - | NZ_CP017774.1 | Flavobacterium commune |
| 195 | 4126341 | 4126523 | - | NZ_CP017479.1 | Flavobacterium gilvum |
| 196 | 2829858 | 2830040 | + | NZ_CP043612.1 | Flavobacterium nitrogenifigens |
| 197 | 183814 | 183996 | + | NZ_CP042435.1 | Panacibacter ginsenosidivorans |
| 198 | 304677 | 304859 | + | NZ_CP037922.1 | Hymenobacter radiodurans |
| 199 | 784555 | 784737 | - | NZ_CP022389.1 | Capnocytophaga canimorsus |
| 200 | 2206354 | 2206536 | + | NZ_CP009976.1 | Cellulophaga baltica 18 |
| 201 | 2162869 | 2163051 | - | NC_017025.1 | Flavobacterium indicum GPTSA100-9 = DSM 17447 |
| 202 | 662198 | 662380 | - | NZ_CP006828.1 | Ornithobacterium rhinotracheale ORT-UMN 88 |
| 203 | 1103714 | 1103896 | - | NZ_CP061813.1 | Polaribacter haliotis |
| 204 | 3393527 | 3393709 | - | NZ_LR215974.1 | Chryseobacterium taihuense |
| 205 | 3533023 | 3533205 | + | NZ_CP033914.1 | Chryseobacterium shandongense |
| 206 | 2262337 | 2262519 | + | NC_018013.1 | Aequorivita sublithincola DSM 14238 |
| 207 | 23020 | 23202 | - | NZ_CP013210.1 | Empedobacter brevis |
| 208 | 2092226 | 2092408 | - | NZ_CP050954.1 | Hymenobacter sp. BT18 |
| 209 | 678814 | 678996 | - | NZ_CP022386.1 | Capnocytophaga gingivalis |
| 210 | 1641836 | 1642015 | + | NC_011059.1 | Prosthecochloris aestuarii DSM 271 |
| 211 | 587895 | 588077 | - | NZ_CP039934.1 | Myroides fluvii |
| 212 | 4511941 | 4512123 | - | NZ_CP007145.1 | Hymenobacter swuensis DY53 |
| 213 | 2054134 | 2054316 | - | NZ_LT906465.1 | Chryseobacterium taklimakanense |
| 214 | 4148516 | 4148698 | - | NZ_CP050995.1 | Chryseobacterium gallinarum |
| 215 | 1892579 | 1892761 | + | NZ_CP038810.1 | Flavobacterium sangjuense |
| 216 | 1542336 | 1542518 | - | NZ_LR134404.1 | Weeksella virosa |
| 217 | 4917761 | 4917943 | + | NZ_CP019288.1 | Kordia antarctica |
| 218 | 512578 | 512760 | + | NZ_CP032489.1 | Arachidicoccus soli |
| 219 | 1700937 | 1701119 | - | NZ_LR027382.1 | Alistipes megaguti |
| 220 | 969758 | 969940 | - | NZ_AP019735.1 | Alistipes communis |
| 221 | 2400911 | 2401093 | + | NZ_CP040896.1 | Hymenobacter jejuensis |
| 222 | 1539276 | 1539464 | - | NZ_CP037933.1 | Flavobacterium nackdongense |
| 223 | 1910754 | 1910936 | + | NZ_CP022986.1 | Chryseobacterium camelliae |
| 224 | 4155463 | 4155645 | - | NZ_CP023049.2 | Chryseobacterium piperi |
| 225 | 2224835 | 2225017 | + | NZ_CP032382.1 | Chryseolinea soli |
| 226 | 2854031 | 2854213 | - | NZ_CP032317.1 | Hymenobacter oligotrophus |
| 227 | 3376762 | 3376944 | - | NZ_CP010817.1 | Myroides profundi |
| 228 | 1629486 | 1629668 | + | NZ_CP041345.1 | Tenuifilum thalassicum |
| 229 | 3406275 | 3406457 | + | NZ_CP015067.2 | Elizabethkingia anophelis |
| 230 | 3260879 | 3261061 | - | NZ_CP014337.1 | Elizabethkingia bruuniana |
| 231 | 20306 | 20479 | - | NC_013501.1 | Rhodothermus marinus DSM 4252 |
| 232 | 6081929 | 6082117 | - | NC_015510.1 | Haliscomenobacter hydrossis DSM 1100 |
| 233 | 1224872 | 1225054 | - | NZ_CP042434.1 | Arachidicoccus ginsenosidivorans |
| 234 | 2451262 | 2451450 | + | NC_016940.1 | Saprospira grandis str. Lewin |
| 235 | 140485 | 140667 | + | NZ_CP053698.1 | Empedobacter stercoris |
| 236 | 3401964 | 3402146 | + | NC_017770.1 | Solitalea canadensis DSM 3403 |
| 237 | 162247 | 162417 | - | NC_015682.1 | Thermodesulfobacterium geofontis OPF15 |
| 238 | 1421898 | 1422086 | - | NC_014734.1 | Paludibacter propionicigenes WB4 |
| 239 | 22578 | 22742 | + | NZ_CP030356.1 | Salinibacter ruber |
| 240 | 2808771 | 2808953 | + | NC_018721.1 | Psychroflexus torquis ATCC 700755 |
| 241 | 3075753 | 3075935 | - | NZ_CP015125.1 | Dokdonia donghaensis DSW-1 |
| 242 | 2274127 | 2274309 | - | NC_018011.1 | Alistipes finegoldii DSM 17242 |
| 243 | 2140586 | 2140768 | - | NZ_CP020822.1 | Tenacibaculum maritimum |
| 244 | 1742996 | 1743178 | + | NC_015703.1 | Runella slithyformis DSM 19594 |
| 245 | 5322832 | 5323017 | + | NZ_CP053435.1 | Spirosoma taeanense |
| 246 | 938583 | 938765 | + | NZ_AP019736.1 | Alistipes dispar |
| 247 | 5578479 | 5578664 | - | NZ_CP014263.1 | Spirosoma montaniterrae |
| 248 | 1619786 | 1619971 | - | NZ_CP020105.1 | Spirosoma rigui |
| 249 | 1277832 | 1277996 | + | NZ_LR134483.1 | Listeria grayi |
| 250 | 281095 | 281280 | - | NZ_CP020104.1 | Spirosoma aerolatum |
| 251 | 3208018 | 3208200 | - | NC_016609.1 | Niastella koreensis GR20-10 |
| 252 | 33216 | 33401 | + | NZ_CP050063.1 | Spirosoma aureum |
| 253 | 4407225 | 4407407 | - | NC_013037.1 | Dyadobacter fermentans DSM 18053 |
| 254 | 3743126 | 3743308 | + | NZ_CP017477.1 | Polaribacter vadi |
| 255 | 6366716 | 6366901 | + | NZ_CP010429.1 | Spirosoma radiotolerans |
| 256 | 3632797 | 3632982 | - | NZ_CP025096.1 | Spirosoma pollinicola |
| 257 | 4851241 | 4851423 | + | NZ_CP034562.1 | Flammeovirga pectinis |
| 258 | 333131 | 333313 | + | NZ_AP023049.1 | Alistipes indistinctus |
| 259 | 1342329 | 1342493 | + | NZ_LT906444.1 | Listeria welshimeri |
| 260 | 1363811 | 1363975 | + | NC_003210.1 | Listeria monocytogenes EGD-e |
| 261 | 3097560 | 3097748 | + | NC_015321.1 | Fluviicola taffensis DSM 16823 |
| 262 | 1736652 | 1736813 | + | NZ_CP021780.1 | Paenibacillus donghaensis |
| 263 | 498184 | 498366 | + | NZ_CP040908.1 | Empedobacter falsenii |
| 264 | 1552751 | 1552915 | - | NC_014926.1 | Thermovibrio ammonificans HB-1 |
| 265 | 2035161 | 2035337 | - | NC_015436.1 | Sphaerochaeta coccoides DSM 17374 |
| 266 | 3077731 | 3077913 | + | NZ_CP034161.1 | Epilithonimonas vandammei |
| 267 | 2780134 | 2780322 | - | NZ_CP034120.1 | Glaciecola amylolytica |
| 268 | 748354 | 748536 | + | NC_008255.1 | Cytophaga hutchinsonii ATCC 33406 |
| 269 | 1739894 | 1740076 | + | NC_011060.1 | Pelodictyon phaeoclathratiforme BU-1 |
| 270 | 1953438 | 1953620 | + | NC_008639.1 | Chlorobium phaeobacteroides DSM 266 |
| 271 | 850367 | 850549 | - | NC_011027.1 | Chlorobaculum parvum NCIB 8327 |
| 272 | 5892031 | 5892195 | - | NC_010571.1 | Opitutus terrae PB90-1 |
| 273 | 1290861 | 1291043 | + | NC_002932.3 | Chlorobaculum tepidum TLS |
| 274 | 997478 | 997654 | + | NC_016620.1 | Halobacteriovorax marinus SJ |
| 275 | 876533 | 876715 | - | NZ_CP017305.1 | Chlorobaculum limnaeum |
| 276 | 2319117 | 2319296 | + | NC_005363.1 | Bdellovibrio bacteriovorus HD100 |
| 277 | 1005100 | 1005279 | - | NC_020813.1 | Bdellovibrio exovorus JSS |
| 278 | 4699599 | 4699781 | - | NZ_CP029480.1 | Arcticibacterium luteifluviistationis |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_020156.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00830.21 | 0.77 | 214 | 27.0 | same-strand | Ribosomal L28 family |
| 2 | PF14128.8 | 0.8 | 223 | 20 | same-strand | Domain of unknown function (DUF4295) |
| 3 | PF00448.24 | 0.72 | 201 | 352 | same-strand | SRP54-type protein, GTPase domain |
| 4 | PF02881.21 | 0.72 | 201 | 352 | same-strand | SRP54-type protein, helical bundle domain |
++ More..