Result : Q2SSS2
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 50S ribosomal protein L35 |
| NCBI Accession ID | CP000123.1 |
| Organism | Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) |
| Left | 248810 |
| Right | 249001 |
| Strand | - |
| Nucleotide Sequence | ATGCCAAAAATGAAAACTAAAAAGTCTTTAGCTAAACGTGTTACTGTTAAATCAAATGGAACACTAAAAAGAGCTAAAGCTTATAGATCACACCGTGCAACAGGTAAAACTACTAAGCAAAAAAGACAACTAAGTAAAGCAACAATTATTAGTAAAGTAGATATGAAAAATCTAAAAGGGCTTTTACAATAA |
| Sequence | MPKMKTKKSLAKRVTVKSNGTLKRAKAYRSHRATGKTTKQKRQLSKATIISKVDMKNLKGLLQ |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl00392. Profile Description: Ribosomal protein L35. This ribosomal protein is found in bacteria and organelles only. It is not closely related to any eukaryotic or archaeal ribosomal protein. [Protein synthesis, Ribosomal proteins: synthesis and modification] |
| Pubmed ID | |
| Domain | CDD:412354 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q2SSS2 |
| ORF Length (Amino Acid) | 63 |
++ More..
| Conservation Analysis |
No. of Species: 270
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 248810 | 249001 | - | NC_007633.1 | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
| 2 | 267403 | 267594 | - | NZ_CP001668.1 | Mycoplasma mycoides subsp. capri str. GM12 |
| 3 | 612123 | 612296 | - | NZ_LS991954.1 | Mycoplasma putrefaciens |
| 4 | 509671 | 509865 | - | NZ_CP007520.1 | Mycoplasma yeatsii GM274B |
| 5 | 685388 | 685582 | - | NZ_CP025257.1 | Mesoplasma syrphidae |
| 6 | 218332 | 218526 | + | NC_006055.1 | Mesoplasma florum L1 |
| 7 | 222438 | 222632 | + | NZ_CP024969.1 | Mesoplasma tabanidae |
| 8 | 222791 | 222985 | + | NZ_CP024411.1 | Mesoplasma entomophilum |
| 9 | 325369 | 325563 | - | NZ_CP024964.1 | Entomoplasma melaleucae |
| 10 | 234119 | 234313 | + | NZ_CP023173.1 | Mesoplasma chauliocola |
| 11 | 616731 | 616925 | - | NZ_CP024965.1 | Entomoplasma somnilux |
| 12 | 103148 | 103342 | + | NZ_CP023668.1 | Mesoplasma lactucae ATCC 49193 |
| 13 | 304495 | 304689 | + | NZ_CP024962.1 | Entomoplasma freundtii |
| 14 | 969500 | 969694 | - | NZ_CP012357.1 | Spiroplasma litorale |
| 15 | 261490 | 261684 | + | NZ_CP012622.1 | Spiroplasma cantharicola |
| 16 | 227004 | 227198 | + | NZ_CP025543.1 | Spiroplasma monobiae MQ-1 |
| 17 | 232509 | 232703 | + | NC_021833.1 | Spiroplasma diminutum CUAS-1 |
| 18 | 247944 | 248138 | + | NC_021846.1 | Spiroplasma taiwanense CT-1 |
| 19 | 241013 | 241207 | + | NZ_CP017015.1 | Spiroplasma helicoides |
| 20 | 421475 | 421669 | + | NZ_CP043026.1 | Spiroplasma chinense |
| 21 | 303667 | 303861 | + | NZ_CP025057.1 | Spiroplasma floricola 23-6 |
| 22 | 277178 | 277372 | + | NC_022998.1 | Spiroplasma apis B31 |
| 23 | 291247 | 291441 | + | NZ_CP038013.1 | Spiroplasma gladiatoris |
| 24 | 1235098 | 1235292 | - | NZ_CP024870.1 | Spiroplasma clarkii |
| 25 | 908322 | 908516 | - | NZ_CP024963.1 | Entomoplasma luminosum |
| 26 | 1046704 | 1046898 | - | NZ_CP012328.1 | Spiroplasma turonicum |
| 27 | 994858 | 995052 | - | NZ_CP022535.1 | Spiroplasma corruscae |
| 28 | 298094 | 298288 | + | NZ_CP006681.1 | Spiroplasma culicicola AES-1 |
| 29 | 355712 | 355906 | + | NZ_CP046276.1 | Spiroplasma tabanidicola |
| 30 | 1528658 | 1528852 | + | NZ_CP060715.1 | Erysipelothrix inopinata |
| 31 | 1264770 | 1264964 | + | NZ_LR134439.1 | Erysipelothrix rhusiopathiae |
| 32 | 1421264 | 1421458 | - | NZ_CP034234.1 | Erysipelothrix piscisicarius |
| 33 | 132781 | 132981 | - | NZ_CP020773.1 | Staphylococcus lutrae |
| 34 | 874252 | 874440 | + | NZ_LR214951.1 | Mycoplasma neurolyticum |
| 35 | 1085578 | 1085772 | + | NZ_CP046314.1 | Gemella morbillorum |
| 36 | 359407 | 359607 | + | NZ_CP031513.1 | Bombilactobacillus bombi |
| 37 | 544465 | 544665 | + | NZ_CP011403.1 | Ligilactobacillus salivarius str. Ren |
| 38 | 1747327 | 1747527 | - | NZ_LR134304.1 | Staphylococcus schweitzeri |
| 39 | 1682852 | 1683052 | - | NC_007795.1 | Staphylococcus aureus subsp. aureus NCTC 8325 |
| 40 | 988877 | 989074 | - | NZ_CP009709.1 | Weizmannia coagulans DSM 1 = ATCC 7050 |
| 41 | 135715 | 135903 | - | NZ_LR214986.1 | Mycoplasmopsis cynos |
| 42 | 387970 | 388170 | + | NZ_CP018199.1 | Staphylococcus succinus |
| 43 | 778928 | 779116 | + | NZ_LR214950.1 | Mycoplasmopsis gallinacea |
| 44 | 164636 | 164824 | + | NZ_CP055143.1 | Mycoplasma hominis |
| 45 | 526897 | 527085 | - | NZ_CP029295.1 | Mycoplasma phocidae |
| 46 | 722230 | 722430 | - | NZ_CP027783.1 | Tetragenococcus osmophilus |
| 47 | 1240627 | 1240827 | + | NZ_CP008724.1 | Staphylococcus xylosus |
| 48 | 1550041 | 1550241 | - | NZ_CP013114.1 | Staphylococcus equorum |
| 49 | 595936 | 596136 | + | NZ_CP045007.1 | Latilactobacillus graminis |
| 50 | 1483435 | 1483635 | - | NC_014925.1 | Staphylococcus pseudintermedius HKU10-03 |
| 51 | 1225634 | 1225831 | - | NZ_CP024610.1 | Lactobacillus terrae |
| 52 | 551914 | 552114 | + | NZ_CP041364.1 | Schleiferilactobacillus harbinensis |
| 53 | 1672675 | 1672875 | - | NZ_LT906460.1 | Staphylococcus simiae |
| 54 | 644290 | 644487 | + | NC_015520.1 | Mahella australiensis 50-1 BON |
| 55 | 999065 | 999265 | - | NZ_CP007601.1 | Staphylococcus capitis subsp. capitis |
| 56 | 1195939 | 1196139 | + | NZ_CP035288.1 | Staphylococcus epidermidis |
| 57 | 1253171 | 1253371 | + | NZ_AP018587.1 | Staphylococcus caprae |
| 58 | 1195223 | 1195417 | - | NZ_LR134484.1 | Gemella haemolysans |
| 59 | 444745 | 444945 | + | NZ_CP031835.1 | Lactobacillus amylolyticus |
| 60 | 1352742 | 1352942 | + | NZ_CP018776.1 | Staphylococcus condimenti |
| 61 | 1741538 | 1741738 | - | NZ_CP033460.1 | Staphylococcus debuckii |
| 62 | 715269 | 715457 | + | NZ_CP029258.1 | Mycoplasmopsis synoviae |
| 63 | 2139743 | 2139943 | - | NZ_CP066042.1 | Staphylococcus saccharolyticus |
| 64 | 274598 | 274786 | + | NZ_LR215024.1 | Mycoplasmopsis glycophila |
| 65 | 1286260 | 1286460 | - | NZ_CP045927.1 | Staphylococcus agnetis |
| 66 | 1269668 | 1269868 | + | NZ_CP008747.1 | Staphylococcus hyicus |
| 67 | 389866 | 390069 | + | NZ_CP039712.1 | Vagococcus zengguangii |
| 68 | 1047425 | 1047622 | + | NZ_CP017702.1 | Companilactobacillus farciminis KCTC 3681 = DSM 20184 |
| 69 | 96141 | 96329 | + | NZ_AP022325.1 | Mycoplasmopsis felis |
| 70 | 306644 | 306838 | + | NC_002771.1 | Mycoplasmopsis pulmonis UAB CTIP |
| 71 | 2118852 | 2119052 | - | NZ_CP027770.1 | Staphylococcus felis |
| 72 | 1163471 | 1163671 | + | NZ_LR134089.1 | Staphylococcus saprophyticus |
| 73 | 202056 | 202244 | + | NZ_AP014631.1 | Mycoplasma canadense |
| 74 | 1605077 | 1605277 | + | NZ_CP049887.1 | Vagococcus hydrophili |
| 75 | 783906 | 784106 | + | NZ_CP047141.1 | Ligilactobacillus animalis |
| 76 | 673310 | 673510 | + | NZ_CP059829.1 | Lactobacillus ultunensis |
| 77 | 970852 | 971046 | + | NZ_CP013213.1 | Erysipelothrix larvae |
| 78 | 965901 | 966101 | - | NZ_CP026116.1 | Latilactobacillus curvatus JCM 1096 = DSM 20019 |
| 79 | 233697 | 233897 | - | NZ_CP046037.1 | Latilactobacillus sakei |
| 80 | 676214 | 676402 | + | NZ_LS991951.1 | Mycoplasmopsis edwardii |
| 81 | 241409 | 241612 | - | NZ_CP049886.1 | Vagococcus coleopterorum |
| 82 | 421127 | 421315 | + | NZ_CP033058.2 | Mycoplasma phocicerebrale |
| 83 | 1630270 | 1630470 | - | NZ_LS991421.1 | Lacticaseibacillus zeae |
| 84 | 1648300 | 1648500 | - | NC_014334.2 | Lacticaseibacillus paracasei |
| 85 | 1628416 | 1628616 | - | NZ_AP012544.1 | Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393 |
| 86 | 1983756 | 1983956 | - | NC_022369.1 | Lactococcus lactis subsp. cremoris KW2 |
| 87 | 3108402 | 3108599 | - | NC_010681.1 | Paraburkholderia phytofirmans PsJN |
| 88 | 716446 | 716643 | - | NZ_CP012034.1 | Companilactobacillus ginsenosidimutans |
| 89 | 341010 | 341198 | + | NZ_CP030103.1 | Mycoplasma cloacale |
| 90 | 1159679 | 1159879 | + | NZ_LR134242.1 | Staphylococcus warneri |
| 91 | 269302 | 269502 | - | NC_022737.1 | Staphylococcus pasteuri SP1 |
| 92 | 1201709 | 1201906 | + | NZ_CP049134.1 | Paraburkholderia tropica |
| 93 | 184152 | 184346 | + | NZ_AP019711.1 | Amedibacterium intestinale |
| 94 | 475919 | 476107 | + | NZ_AP014657.1 | Mycoplasmopsis arginini |
| 95 | 243389 | 243586 | + | NZ_CP035900.1 | Burkholderia glumae |
| 96 | 1116689 | 1116889 | - | NZ_CP019573.1 | Abyssicoccus albus |
| 97 | 796734 | 796922 | + | NZ_CP011368.1 | Mycoplasmopsis canis |
| 98 | 1562665 | 1562865 | - | NZ_CP018180.1 | Liquorilactobacillus nagelii |
| 99 | 293616 | 293804 | + | NZ_CP008748.1 | Mycoplasma hyosynoviae |
| 100 | 577192 | 577380 | - | NZ_LS991949.1 | Mycoplasma alkalescens |
| 101 | 1049524 | 1049724 | + | NZ_CP065712.1 | Staphylococcus auricularis |
| 102 | 1342609 | 1342809 | - | NZ_CP044499.1 | Lapidilactobacillus dextrinicus |
| 103 | 533277 | 533477 | + | NZ_CP017267.1 | Vagococcus teuberi |
| 104 | 1763398 | 1763595 | - | NC_010622.1 | Paraburkholderia phymatum STM815 |
| 105 | 1115802 | 1115999 | + | NZ_CP029640.1 | Paraburkholderia dokdonella |
| 106 | 582726 | 582926 | + | NZ_CP061341.1 | Lactobacillus kefiranofaciens |
| 107 | 180827 | 181015 | + | NZ_LR215047.1 | Mycoplasma arthritidis |
| 108 | 1287943 | 1288143 | - | NZ_AP019750.1 | Lactobacillus delbrueckii subsp. delbrueckii |
| 109 | 667599 | 667787 | + | NZ_LR214972.1 | Mycoplasmopsis bovirhinis |
| 110 | 257650 | 257838 | + | NZ_LR215031.1 | Mycoplasmopsis gallopavonis |
| 111 | 1658647 | 1658844 | + | NZ_CP009832.1 | Burkholderia multivorans ATCC BAA-247 |
| 112 | 1554507 | 1554704 | + | NZ_CP020737.1 | Paraburkholderia acidophila |
| 113 | 1835663 | 1835860 | + | NZ_CP002580.1 | Burkholderia plantarii |
| 114 | 2882695 | 2882892 | + | NZ_CP011503.1 | Burkholderia pyrrocinia |
| 115 | 1682809 | 1683006 | + | NZ_CP013459.1 | Burkholderia stagnalis |
| 116 | 1908571 | 1908771 | + | NZ_CP033732.1 | Staphylococcus hominis |
| 117 | 1600064 | 1600261 | + | NC_007510.1 | Burkholderia lata |
| 118 | 1657593 | 1657790 | + | NZ_CP013450.1 | Burkholderia cenocepacia |
| 119 | 1588036 | 1588233 | - | NZ_CP012559.1 | Companilactobacillus heilongjiangensis |
| 120 | 1610847 | 1611044 | + | NZ_CP013401.1 | Burkholderia metallica |
| 121 | 1417221 | 1417421 | + | NZ_CP065425.1 | Heyndrickxia vini |
| 122 | 1806610 | 1806807 | - | NZ_CP009795.1 | Burkholderia dolosa AU0158 |
| 123 | 1685462 | 1685659 | + | NZ_CP013414.1 | Burkholderia ubonensis |
| 124 | 2674069 | 2674269 | - | NZ_CP060720.1 | Vagococcus carniphilus |
| 125 | 1762715 | 1762915 | - | NZ_CP070872.1 | Lactococcus taiwanensis |
| 126 | 196642 | 196842 | - | NZ_CP018888.1 | Amylolactobacillus amylophilus DSM 20533 = JCM 1125 |
| 127 | 1546688 | 1546888 | - | NZ_CP032627.1 | Lactococcus allomyrinae |
| 128 | 1606783 | 1606980 | + | NZ_CP013398.1 | Burkholderia seminalis |
| 129 | 1599102 | 1599299 | + | NZ_CP045235.1 | Burkholderia cepacia |
| 130 | 1265078 | 1265278 | - | NZ_CP015444.1 | Lactobacillus helveticus |
| 131 | 1174828 | 1175025 | + | NZ_CP046913.1 | Paraburkholderia acidisoli |
| 132 | 1689802 | 1689999 | + | NZ_CP019323.1 | Companilactobacillus allii |
| 133 | 1162472 | 1162669 | + | NZ_CP046909.1 | Paraburkholderia acidiphila |
| 134 | 2049946 | 2050143 | - | NZ_CP009727.1 | Burkholderia mallei |
| 135 | 835738 | 835935 | - | NZ_CP015958.1 | Paraburkholderia caribensis |
| 136 | 2955983 | 2956180 | - | NC_007651.1 | Burkholderia thailandensis E264 |
| 137 | 46024 | 46221 | - | NZ_CP008781.1 | Burkholderia pseudomallei |
| 138 | 4054099 | 4054296 | - | NZ_CP009555.1 | Burkholderia oklahomensis C6786 |
| 139 | 201051 | 201239 | + | NC_014014.1 | Mycoplasma crocodyli MP145 |
| 140 | 358620 | 358808 | - | NZ_LR214970.1 | Mycoplasmopsis bovigenitalium |
| 141 | 1649834 | 1650034 | - | NZ_CP011366.1 | Salinicoccus halodurans |
| 142 | 2924606 | 2924806 | - | NC_020995.1 | Enterococcus casseliflavus EC20 |
| 143 | 4508023 | 4508223 | - | NZ_CP024035.1 | Priestia aryabhattai |
| 144 | 3107710 | 3107913 | + | NZ_CP024645.1 | Rhizobacter gummiphilus |
| 145 | 130167 | 130367 | + | NZ_CP014022.1 | Staphylococcus lugdunensis |
| 146 | 1493736 | 1493930 | - | NZ_CP011391.1 | Faecalibaculum rodentium |
| 147 | 271608 | 271808 | + | NZ_LS483306.1 | Enterococcus cecorum |
| 148 | 2334840 | 2335040 | - | NC_014098.1 | Kyrpidia tusciae DSM 2912 |
| 149 | 3764010 | 3764210 | - | NZ_CP053989.1 | Niallia circulans |
| 150 | 516148 | 516336 | + | NZ_CP040825.1 | Mycoplasma nasistruthionis |
| 151 | 620677 | 620865 | + | NZ_CP005933.1 | Mycoplasmopsis bovis CQ-W70 |
| 152 | 1330079 | 1330279 | - | NZ_LR134512.1 | Streptococcus agalactiae |
| 153 | 225821 | 226021 | + | NZ_CP012047.1 | Tetragenococcus halophilus |
| 154 | 2327876 | 2328076 | - | NZ_CP024955.1 | Kyrpidia spormannii |
| 155 | 1568639 | 1568839 | + | NZ_CP016953.1 | Streptococcus himalayensis |
| 156 | 1209717 | 1209917 | + | NZ_CP064056.1 | Staphylococcus lloydii |
| 157 | 158421 | 158618 | - | NZ_CP053187.1 | Turicibacter sanguinis |
| 158 | 803734 | 803931 | + | NZ_CP017996.1 | Companilactobacillus crustorum |
| 159 | 44304 | 44501 | - | NZ_CP020046.1 | Thiomonas intermedia |
| 160 | 519106 | 519294 | - | NZ_LR215036.1 | Mycoplasmopsis citelli |
| 161 | 1196589 | 1196789 | - | NZ_LS483343.1 | Streptococcus ferus |
| 162 | 700376 | 700564 | - | NZ_CP034841.1 | Mycoplasmopsis phocirhinis |
| 163 | 1452027 | 1452227 | - | NZ_CP059276.1 | Lactobacillus taiwanensis |
| 164 | 1402559 | 1402759 | - | NC_008530.1 | Lactobacillus gasseri ATCC 33323 = JCM 1131 |
| 165 | 1445243 | 1445443 | - | NZ_AP018549.1 | Lactobacillus paragasseri |
| 166 | 1722512 | 1722703 | + | NC_009633.1 | Alkaliphilus metalliredigens QYMF |
| 167 | 555426 | 555614 | + | NC_009497.1 | Mycoplasmopsis agalactiae PG2 |
| 168 | 993103 | 993303 | + | NZ_LT906464.1 | Staphylococcus muscae |
| 169 | 1138251 | 1138448 | + | NZ_CP053988.1 | Abiotrophia defectiva |
| 170 | 401538 | 401726 | + | NZ_AP018940.1 | Mycoplasmopsis californica |
| 171 | 2190005 | 2190205 | - | NZ_AP022822.1 | Enterococcus saigonensis |
| 172 | 2396097 | 2396297 | - | NC_017770.1 | Solitalea canadensis DSM 3403 |
| 173 | 349502 | 349690 | - | NZ_LR215041.1 | Mycoplasmopsis columbina |
| 174 | 609575 | 609775 | - | NZ_CP022096.2 | Staphylococcus pettenkoferi |
| 175 | 705720 | 705908 | + | NZ_LR214938.2 | Mycoplasma salivarium |
| 176 | 802542 | 802730 | + | NZ_LR215039.1 | Mycoplasmopsis columboralis |
| 177 | 919491 | 919688 | + | NZ_AP014680.1 | Paucilactobacillus hokkaidonensis JCM 18461 |
| 178 | 884264 | 884452 | - | NZ_LR215037.1 | Mycoplasmopsis maculosa |
| 179 | 405384 | 405578 | + | NZ_CP059674.1 | Mycoplasma tullyi |
| 180 | 465728 | 465922 | + | NC_018406.1 | Mycoplasma gallisepticum VA94_7994-1-7P |
| 181 | 859193 | 859390 | + | NZ_CP014170.1 | Clostridium tyrobutyricum |
| 182 | 1522857 | 1523054 | - | NZ_CP009170.1 | Thermoanaerobacter kivui |
| 183 | 1342704 | 1342904 | - | NZ_CP013911.1 | Staphylococcus haemolyticus |
| 184 | 3629665 | 3629865 | - | NZ_CP042593.1 | Bacillus dafuensis |
| 185 | 3138667 | 3138867 | + | NZ_CP041305.1 | Cytobacillus ciccensis |
| 186 | 715101 | 715301 | + | NZ_CP034543.1 | Streptococcus periodonticum |
| 187 | 2201135 | 2201335 | - | NZ_CP012152.1 | Anoxybacillus gonensis |
| 188 | 1552719 | 1552916 | - | NC_014220.1 | Syntrophothermus lipocalidus DSM 12680 |
| 189 | 2321628 | 2321825 | - | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 190 | 550432 | 550632 | + | NZ_CP014342.1 | Geobacillus subterraneus |
| 191 | 2385893 | 2386090 | + | NZ_CP059066.1 | Koleobacter methoxysyntrophicus |
| 192 | 1180321 | 1180521 | + | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 193 | 810951 | 811148 | + | NC_014964.1 | Thermoanaerobacter brockii subsp. finnii Ako-1 |
| 194 | 1654253 | 1654450 | - | NC_015958.1 | Thermoanaerobacter wiegelii Rt8.B1 |
| 195 | 4260283 | 4260480 | - | NZ_CP026363.1 | Brevibacillus agri |
| 196 | 3924771 | 3924968 | - | NZ_CP011803.1 | Clostridium carboxidivorans P7 |
| 197 | 728029 | 728226 | + | NC_015519.1 | Tepidanaerobacter acetatoxydans Re1 |
| 198 | 1319509 | 1319709 | + | NZ_CP010820.1 | Lysinibacillus fusiformis |
| 199 | 1212643 | 1212843 | + | NZ_CP070511.1 | Parageobacillus toebii |
| 200 | 3659251 | 3659451 | - | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 201 | 640598 | 640795 | + | NZ_AP023367.1 | Anaerocolumna cellulosilytica |
| 202 | 1758947 | 1759147 | + | NZ_CP049740.1 | Jeotgalibaca arthritidis |
| 203 | 703632 | 703820 | + | NZ_CP030140.1 | Mycoplasma anseris |
| 204 | 211548 | 211748 | + | NZ_CP065729.1 | Macrococcus caseolyticus |
| 205 | 1657431 | 1657631 | - | NZ_CP054482.1 | Macrococcus bohemicus |
| 206 | 1688880 | 1689077 | + | NZ_CP010311.1 | Geoalkalibacter subterraneus |
| 207 | 1201839 | 1202039 | - | NZ_CP068061.1 | Mammaliicoccus vitulinus |
| 208 | 959739 | 959939 | + | NZ_CP022046.2 | Mammaliicoccus sciuri |
| 209 | 224802 | 224963 | - | NZ_CP024161.1 | Mycoplasma dispar |
| 210 | 564844 | 565035 | - | NZ_LR215043.1 | Mycoplasmopsis columbinasalis |
| 211 | 1517243 | 1517440 | - | NC_014209.1 | Thermoanaerobacter mathranii subsp. mathranii str. A3 |
| 212 | 1535537 | 1535734 | - | NC_013921.1 | Thermoanaerobacter italicus Ab9 |
| 213 | 868506 | 868703 | + | NZ_CP032416.1 | Clostridium fermenticellae |
| 214 | 1787249 | 1787449 | - | NZ_CP017713.1 | Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 |
| 215 | 1190209 | 1190409 | + | NZ_CP038015.1 | Paenisporosarcina antarctica |
| 216 | 1440403 | 1440600 | - | NZ_CP012395.1 | Clostridium autoethanogenum DSM 10061 |
| 217 | 3767216 | 3767413 | - | NC_014328.1 | Clostridium ljungdahlii DSM 13528 |
| 218 | 2278397 | 2278594 | - | NZ_LN879430.1 | Herbinix luporum |
| 219 | 1533747 | 1533947 | - | NZ_CP047361.1 | Macrococcus canis |
| 220 | 1041748 | 1041948 | + | NZ_LT906462.1 | Mammaliicoccus stepanovicii |
| 221 | 512528 | 512722 | - | NZ_CP007585.1 | Mycoplasma flocculare ATCC 27399 |
| 222 | 53638 | 53838 | - | NZ_CP015439.1 | Anoxybacillus amylolyticus |
| 223 | 742151 | 742348 | + | NC_008525.1 | Pediococcus pentosaceus ATCC 25745 |
| 224 | 772766 | 772945 | - | NC_006908.1 | Mycoplasma mobile 163K |
| 225 | 561504 | 561704 | - | NZ_LR215050.1 | Acholeplasma hippikon |
| 226 | 1197554 | 1197751 | + | NC_020134.1 | Thermoclostridium stercorarium subsp. stercorarium DSM 8532 |
| 227 | 4748937 | 4749134 | - | NZ_CP020953.1 | Clostridium drakei |
| 228 | 5157317 | 5157514 | + | NZ_CP009933.1 | Clostridium scatologenes |
| 229 | 1071952 | 1072149 | + | NZ_CP047602.1 | Thermoanaerobacterium aotearoense |
| 230 | 533232 | 533426 | + | NZ_AP019736.1 | Alistipes dispar |
| 231 | 656407 | 656595 | - | NZ_CP034044.1 | Mycoplasma struthionis |
| 232 | 3199059 | 3199256 | - | NC_011837.1 | Clostridium kluyveri NBRC 12016 |
| 233 | 1631211 | 1631408 | - | NZ_LT635479.1 | Lachnoclostridium phocaeense |
| 234 | 250290 | 250487 | + | NZ_CP027002.1 | [Ruminococcus] gnavus ATCC 29149 |
| 235 | 922479 | 922676 | + | NZ_CP022413.2 | Blautia hansenii DSM 20583 |
| 236 | 810119 | 810316 | + | NZ_CP030280.1 | Blautia argi |
| 237 | 1766793 | 1766990 | - | NZ_LR699011.1 | Roseburia hominis |
| 238 | 13951 | 14148 | + | NZ_LT990039.1 | Massilistercora timonensis |
| 239 | 1801998 | 1802195 | + | NZ_CP048000.1 | Anaerocolumna sedimenticola |
| 240 | 2819366 | 2819566 | + | NZ_CP017786.1 | Bacillus xiamenensis |
| 241 | 2730616 | 2730816 | + | NZ_CP043404.1 | Bacillus safensis |
| 242 | 2573105 | 2573305 | - | NZ_CP011150.1 | Bacillus altitudinis |
| 243 | 1791633 | 1791830 | + | NZ_CP013019.1 | Clostridium pasteurianum |
| 244 | 3308058 | 3308255 | - | NZ_CP028842.1 | Clostridium botulinum |
| 245 | 3551061 | 3551258 | - | NZ_CP011663.1 | Clostridium sporogenes |
| 246 | 1066275 | 1066472 | + | NZ_CP031124.1 | Ephemeroptericola cinctiostellae |
| 247 | 2927688 | 2927885 | + | NZ_CP071376.1 | Clostridium gasigenes |
| 248 | 3049653 | 3049850 | + | NZ_CP071376.1 | Clostridium gasigenes |
| 249 | 275021 | 275215 | + | NC_010503.1 | Ureaplasma parvum serovar 3 str. ATCC 27815 |
| 250 | 1195316 | 1195513 | - | NZ_CP059567.1 | Neisseria shayeganii |
| 251 | 2229782 | 2229979 | - | NZ_CP041666.1 | Radiobacillus deserti |
| 252 | 1796855 | 1797052 | + | NZ_CP043998.1 | Clostridium diolis |
| 253 | 262426 | 262620 | + | NC_011374.1 | Ureaplasma urealyticum serovar 10 str. ATCC 33699 |
| 254 | 1921318 | 1921515 | - | NZ_LT906477.1 | Clostridium cochlearium |
| 255 | 3168790 | 3168987 | + | NZ_CP023671.1 | Clostridium septicum |
| 256 | 482963 | 483157 | + | NZ_LT906459.1 | Odoribacter splanchnicus |
| 257 | 2398498 | 2398695 | + | NC_014393.1 | Clostridium cellulovorans 743B |
| 258 | 4792675 | 4792872 | - | NZ_CP039126.1 | Blautia producta |
| 259 | 1226722 | 1226889 | - | NC_004432.1 | Mycoplasma penetrans HF-2 |
| 260 | 1773115 | 1773312 | - | NZ_CP014204.2 | Clostridium baratii |
| 261 | 2871094 | 2871291 | + | NC_020291.1 | Clostridium saccharoperbutylacetonicum N1-4(HMT) |
| 262 | 800578 | 800775 | + | NZ_CP016786.1 | Clostridium isatidis |
| 263 | 1437079 | 1437276 | - | NZ_CP016786.1 | Clostridium isatidis |
| 264 | 2311684 | 2311881 | - | NZ_HG917868.1 | Clostridium bornimense |
| 265 | 893027 | 893224 | + | NZ_CP007452.1 | Peptoclostridium acidaminophilum DSM 3953 |
| 266 | 197001 | 197195 | + | NC_021283.1 | Mycoplasma hyopneumoniae 168-L |
| 267 | 1610228 | 1610425 | + | NZ_CP014176.1 | Clostridium argentinense |
| 268 | 857823 | 858020 | - | NZ_LR130778.1 | Petrocella atlantisensis |
| 269 | 3827554 | 3827751 | + | NZ_CP034464.1 | Undibacterium parvum |
| 270 | 314112 | 314309 | - | NZ_CP046027.1 | Neisseria brasiliensis |
| 271 | 2980393 | 2980596 | - | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 272 | 2472260 | 2472457 | - | NC_015687.1 | Clostridium acetobutylicum DSM 1731 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP060715.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00707.24 | 0.97 | 261 | 25.0 | same-strand | Translation initiation factor IF-3, C-terminal domain |
| 2 | PF05198.18 | 0.85 | 229 | 26.0 | same-strand | Translation initiation factor IF-3, N-terminal domain |
| 3 | PF00453.20 | 0.73 | 197 | 33 | same-strand | Ribosomal protein L20 |
++ More..