Result : Q2S2U1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 30S ribosomal protein S18 |
| NCBI Accession ID | CP000159.1 |
| Organism | Salinibacter ruber (strain DSM 13855 / M31) |
| Left | 1715696 |
| Right | 1715908 |
| Strand | + |
| Nucleotide Sequence | ATGGCTGACCAAAACGACGTCGACTACGAGCACCTCGAATACGTAGACTACAAGGACACCGAATTCCTGGAGCAGTTCATCAACAACCAGGGCAAGATCCTGCCGCGCCGCGTGACGGGGGTGCCCGCCCGCGTGCAGCGCCAGATCACGAAGGCGATCAAGCGGGCCCGGCACCTCGCCCTCATGCCGTACGTGTCCGAGTCGGTTCGGTAA |
| Sequence | MADQNDVDYEHLEYVDYKDTEFLEQFINNQGKILPRRVTGVPARVQRQITKAIKRARHLALMPYVSESVR |
| Source of smORF | Swiss-Prot |
| Function | Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit. {ECO:0000255|HAMAP-Rule:MF_00270}. |
| Pubmed ID | 16330755 |
| Domain | CDD:412341 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q2S2U1 |
| ORF Length (Amino Acid) | 70 |
++ More..
| Conservation Analysis |
No. of Species: 345
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1699046 | 1699258 | + | NZ_CP030356.1 | Salinibacter ruber |
| 2 | 1959455 | 1959694 | + | NZ_CP014835.1 | Streptococcus halotolerans |
| 3 | 1726122 | 1726361 | - | NZ_LT906439.1 | Streptococcus merionis |
| 4 | 1706679 | 1706918 | - | NZ_LR134275.1 | Streptococcus vestibularis |
| 5 | 1635556 | 1635795 | - | NZ_LR134512.1 | Streptococcus agalactiae |
| 6 | 1712747 | 1712986 | - | NZ_CP025536.1 | Streptococcus pluranimalium |
| 7 | 302704 | 302943 | + | NZ_AP014612.1 | Streptococcus troglodytae |
| 8 | 1576520 | 1576759 | - | NZ_LS483343.1 | Streptococcus ferus |
| 9 | 1695543 | 1695782 | - | NZ_LS483383.1 | Streptococcus cristatus ATCC 51100 |
| 10 | 1011494 | 1011733 | + | NZ_CP032620.1 | Streptococcus koreensis |
| 11 | 944273 | 944512 | + | NZ_CP043405.1 | Streptococcus ratti |
| 12 | 385332 | 385502 | - | NZ_CP063145.1 | Cruoricaptor ignavus |
| 13 | 1506051 | 1506290 | - | NZ_LS483403.1 | Streptococcus lutetiensis |
| 14 | 1576681 | 1576920 | - | NZ_CP034543.1 | Streptococcus periodonticum |
| 15 | 1643662 | 1643901 | - | NZ_CP012805.1 | Streptococcus anginosus |
| 16 | 300640 | 300879 | + | NZ_LS483436.1 | Streptococcus intermedius |
| 17 | 1167930 | 1168169 | - | NZ_CP032621.1 | Streptococcus gwangjuense |
| 18 | 1882879 | 1883118 | + | NZ_CP013237.1 | Streptococcus mutans |
| 19 | 1817778 | 1818017 | - | NZ_CP039457.1 | Streptococcus pasteurianus |
| 20 | 1940542 | 1940781 | - | NZ_LR594049.1 | Streptococcus gordonii |
| 21 | 154507 | 154746 | + | NZ_CP014699.1 | Streptococcus pantholopis |
| 22 | 453062 | 453301 | - | NZ_CP054015.1 | Streptococcus gallolyticus |
| 23 | 443534 | 443773 | + | NZ_CP031733.1 | Streptococcus chenjunshii |
| 24 | 1332175 | 1332414 | - | NZ_LR134336.1 | Streptococcus oralis ATCC 35037 |
| 25 | 1835572 | 1835811 | - | NZ_CP029491.1 | Streptococcus sobrinus |
| 26 | 1444751 | 1444990 | - | NC_015875.1 | Streptococcus pseudopneumoniae IS7493 |
| 27 | 8364 | 8534 | - | NZ_CP021904.1 | Alkalitalea saponilacus |
| 28 | 541240 | 541479 | - | NZ_CP015196.1 | Streptococcus marmotae |
| 29 | 1692956 | 1693195 | - | NZ_AP018400.1 | Streptococcus ruminantium |
| 30 | 3075934 | 3076143 | - | NZ_AP019309.1 | Intestinibaculum porci |
| 31 | 3496088 | 3496306 | - | NZ_LT605205.1 | Proteiniphilum saccharofermentans |
| 32 | 663867 | 664106 | + | NZ_CP022680.1 | Streptococcus respiraculi |
| 33 | 1730617 | 1730856 | - | NC_012924.1 | Streptococcus suis SC84 |
| 34 | 9802 | 10038 | + | NC_020207.1 | Enterococcus faecium ATCC 8459 = NRRL B-2354 |
| 35 | 10180 | 10416 | + | NZ_CP065211.1 | Enterococcus lactis |
| 36 | 654103 | 654339 | - | NZ_CP023011.2 | Enterococcus hirae |
| 37 | 1772643 | 1772861 | - | NZ_LR215980.1 | Paraprevotella xylaniphila YIT 11841 |
| 38 | 1623328 | 1623498 | + | NC_015501.1 | Porphyromonas asaccharolytica DSM 20707 |
| 39 | 3221729 | 3221899 | + | NZ_CP029480.1 | Arcticibacterium luteifluviistationis |
| 40 | 1971593 | 1971763 | + | NZ_AP019735.1 | Alistipes communis |
| 41 | 3611401 | 3611580 | - | NZ_CP019699.1 | Novibacillus thermophilus |
| 42 | 9737 | 9973 | + | NZ_CP023074.1 | Enterococcus thailandicus |
| 43 | 9928 | 10164 | + | NC_008525.1 | Pediococcus pentosaceus ATCC 25745 |
| 44 | 10201 | 10437 | + | NZ_CP053421.1 | Pediococcus acidilactici |
| 45 | 2593608 | 2593805 | + | NC_018013.1 | Aequorivita sublithincola DSM 14238 |
| 46 | 1221043 | 1221213 | + | NC_018011.1 | Alistipes finegoldii DSM 17242 |
| 47 | 10217 | 10453 | + | NZ_CP011403.1 | Ligilactobacillus salivarius str. Ren |
| 48 | 3321643 | 3321813 | - | NZ_CP040896.1 | Hymenobacter jejuensis |
| 49 | 3074336 | 3074572 | + | NZ_CP018061.1 | Enterococcus mundtii |
| 50 | 1367267 | 1367437 | + | NZ_CP050954.1 | Hymenobacter sp. BT18 |
| 51 | 2551293 | 2551463 | - | NZ_CP013909.1 | Hymenobacter sedentarius |
| 52 | 2248394 | 2248564 | + | NZ_LR134506.1 | Porphyromonas cangingivalis |
| 53 | 2537463 | 2537702 | + | NZ_CP021874.1 | Enterococcus wangshanyuanii |
| 54 | 10638 | 10874 | + | NC_016605.1 | Pediococcus claussenii ATCC BAA-344 |
| 55 | 1081573 | 1081743 | - | NZ_CP037922.1 | Hymenobacter radiodurans |
| 56 | 2424062 | 2424232 | + | NZ_CP029145.1 | Hymenobacter nivis |
| 57 | 2177532 | 2177744 | - | NC_018178.1 | Melioribacter roseus P3M-2 |
| 58 | 10472 | 10705 | + | NZ_CP031835.1 | Lactobacillus amylolyticus |
| 59 | 923695 | 923934 | - | NZ_CP027783.1 | Tetragenococcus osmophilus |
| 60 | 13725 | 13961 | + | NZ_AP022822.1 | Enterococcus saigonensis |
| 61 | 2101519 | 2101704 | - | NZ_CP023777.1 | Chitinophaga caeni |
| 62 | 3353627 | 3353827 | - | NZ_CP012024.1 | Bacillus smithii |
| 63 | 15049 | 15285 | + | NZ_LS483306.1 | Enterococcus cecorum |
| 64 | 4006107 | 4006286 | + | NC_019897.1 | Thermobacillus composti KWC4 |
| 65 | 1532393 | 1532590 | - | NZ_CP031513.1 | Bombilactobacillus bombi |
| 66 | 1546712 | 1546921 | - | NZ_AP019711.1 | Amedibacterium intestinale |
| 67 | 3411417 | 3411587 | - | NC_014655.1 | Leadbetterella byssophila DSM 17132 |
| 68 | 9880 | 10119 | + | NZ_CP044496.1 | Lactobacillus acetotolerans |
| 69 | 9938 | 10174 | + | NZ_CP061341.1 | Lactobacillus kefiranofaciens |
| 70 | 10358 | 10597 | + | NZ_CP029544.1 | Lactobacillus helsingborgensis |
| 71 | 2229672 | 2229878 | + | NZ_CP006828.1 | Ornithobacterium rhinotracheale ORT-UMN 88 |
| 72 | 9822 | 10058 | + | NC_021181.2 | Lactobacillus acidophilus La-14 |
| 73 | 10036 | 10266 | + | NZ_CP015444.1 | Lactobacillus helveticus |
| 74 | 9948 | 10184 | + | NC_020995.1 | Enterococcus casseliflavus EC20 |
| 75 | 2732435 | 2732629 | + | NZ_CP013862.1 | Lentibacillus amyloliquefaciens |
| 76 | 9824 | 10060 | + | NZ_CP059829.1 | Lactobacillus ultunensis |
| 77 | 2328836 | 2329081 | - | NC_022369.1 | Lactococcus lactis subsp. cremoris KW2 |
| 78 | 1575598 | 1575792 | + | NZ_CP018622.1 | Virgibacillus dokdonensis |
| 79 | 4185890 | 4186075 | - | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 80 | 2686490 | 2686684 | - | NZ_CP034118.1 | Staphylospora marina |
| 81 | 9706 | 9945 | + | NZ_CP012047.1 | Tetragenococcus halophilus |
| 82 | 2830888 | 2831073 | - | NC_019904.1 | Echinicola vietnamensis DSM 17526 |
| 83 | 2696883 | 2697068 | - | NZ_CP040106.1 | Echinicola rosea |
| 84 | 5642546 | 5642725 | - | NZ_CP009286.1 | Paenibacillus stellifer |
| 85 | 1219433 | 1219627 | + | NZ_CP022315.1 | Virgibacillus phasianinus |
| 86 | 136434 | 136673 | + | NC_013947.1 | Stackebrandtia nassauensis DSM 44728 |
| 87 | 324412 | 324606 | + | NZ_CP022437.1 | Virgibacillus necropolis |
| 88 | 124103 | 124348 | - | NZ_CP070872.1 | Lactococcus taiwanensis |
| 89 | 417371 | 417616 | + | NZ_CP065637.1 | Lactococcus garvieae |
| 90 | 1997797 | 1998042 | - | NZ_CP032627.1 | Lactococcus allomyrinae |
| 91 | 3598533 | 3598727 | - | NZ_CP041666.1 | Radiobacillus deserti |
| 92 | 224964 | 225158 | + | NZ_CP020772.1 | Halobacillus mangrovi |
| 93 | 2950859 | 2951068 | + | NZ_CP068170.1 | Erysipelatoclostridium ramosum |
| 94 | 3850246 | 3850440 | - | NZ_CP017962.1 | Virgibacillus halodenitrificans |
| 95 | 2527828 | 2528022 | - | NZ_CP041217.1 | Saccharibacillus brassicae |
| 96 | 8140227 | 8140406 | - | NZ_CP009285.1 | Paenibacillus borealis |
| 97 | 4120968 | 4121162 | - | NC_017668.1 | Halobacillus halophilus DSM 2266 |
| 98 | 4213854 | 4214033 | + | NZ_CP014167.1 | Paenibacillus yonginensis |
| 99 | 549496 | 549696 | - | NZ_CP027770.1 | Staphylococcus felis |
| 100 | 7544567 | 7544767 | + | NZ_AP022870.1 | Phytohabitans flavus |
| 101 | 4068700 | 4068894 | - | NZ_CP024109.1 | Bacillus cytotoxicus |
| 102 | 1012724 | 1012924 | - | NZ_CP017703.1 | Aeribacillus pallidus |
| 103 | 244948 | 245124 | + | NC_017095.1 | Fervidobacterium pennivorans DSM 9078 |
| 104 | 7010396 | 7010596 | + | NZ_AP023355.1 | Actinocatenispora thailandica |
| 105 | 1581331 | 1581510 | - | NC_016641.1 | Paenibacillus terrae HPL-003 |
| 106 | 6476951 | 6477130 | - | NZ_CP034346.1 | Paenibacillus lutimineralis |
| 107 | 3593235 | 3593435 | + | NZ_AP022871.1 | Phytohabitans suffuscus |
| 108 | 6643762 | 6643941 | - | NZ_LR134338.1 | Brevibacillus brevis |
| 109 | 574478 | 574657 | + | NZ_CP026363.1 | Brevibacillus agri |
| 110 | 2724947 | 2725156 | - | NZ_AP024085.1 | Faecalibacillus intestinalis |
| 111 | 1539909 | 1540124 | - | NC_012969.1 | Methylovorus glucosetrophus SIP3-4 |
| 112 | 3613163 | 3613357 | - | NC_004193.1 | Oceanobacillus iheyensis HTE831 |
| 113 | 4085318 | 4085554 | - | NC_014151.1 | Cellulomonas flavigena DSM 20109 |
| 114 | 8243683 | 8243883 | - | NZ_CP023865.1 | Actinoplanes teichomyceticus ATCC 31121 |
| 115 | 8732872 | 8733072 | - | NC_017093.1 | Actinoplanes missouriensis 431 |
| 116 | 9331734 | 9331934 | - | NC_022657.1 | Actinoplanes friuliensis DSM 7358 |
| 117 | 5244551 | 5244736 | + | NZ_CP023694.1 | Streptomyces coeruleorubidus |
| 118 | 6986233 | 6986433 | - | NC_014391.1 | Micromonospora aurantiaca ATCC 27029 |
| 119 | 3000257 | 3000451 | - | NC_013205.1 | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
| 120 | 3056558 | 3056758 | - | NZ_CP061725.1 | Micromonospora craniellae |
| 121 | 7483720 | 7483920 | - | NZ_CP058322.1 | Micromonospora carbonacea |
| 122 | 1410622 | 1410837 | + | NC_007947.1 | Methylobacillus flagellatus KT |
| 123 | 410753 | 410929 | + | NZ_CP011402.1 | Denitrobacterium detoxificans |
| 124 | 2534976 | 2535197 | + | NC_009664.2 | Kineococcus radiotolerans SRS30216 = ATCC BAA-149 |
| 125 | 1545517 | 1545696 | + | NZ_CP034562.1 | Flammeovirga pectinis |
| 126 | 226756 | 226941 | - | NZ_AP014564.1 | Ichthyobacterium seriolicida |
| 127 | 1904869 | 1905084 | - | NZ_AP022853.1 | Sulfurimicrobium lacus |
| 128 | 4227449 | 4227628 | - | NZ_CP033433.1 | Cohnella candidum |
| 129 | 1393144 | 1393323 | - | NC_016148.1 | Thermovirga lienii DSM 17291 |
| 130 | 2694194 | 2694415 | + | NZ_CP014209.1 | Isoptericola dokdonensis DS-3 |
| 131 | 1002002 | 1002178 | + | NC_007963.1 | Chromohalobacter salexigens DSM 3043 |
| 132 | 1044876 | 1045055 | + | NZ_CP034248.1 | Paenibacillus lentus |
| 133 | 4223412 | 4223633 | - | NC_013521.1 | Sanguibacter keddieii DSM 10542 |
| 134 | 2966322 | 2966507 | + | NC_008255.1 | Cytophaga hutchinsonii ATCC 33406 |
| 135 | 6017930 | 6018109 | - | NZ_CP009288.1 | Paenibacillus durus |
| 136 | 6236990 | 6237223 | + | NZ_CP045096.1 | Streptomyces phaeolivaceus |
| 137 | 4228786 | 4229022 | - | NC_015514.1 | Cellulomonas fimi ATCC 484 |
| 138 | 2141831 | 2142067 | + | NZ_CP047156.1 | Epidermidibacterium keratini |
| 139 | 3361246 | 3361416 | - | NZ_CP016502.1 | Acetivibrio thermocellus DSM 2360 |
| 140 | 3859203 | 3859436 | - | NZ_LN831790.1 | Streptomyces leeuwenhoekii |
| 141 | 3404622 | 3404858 | - | NZ_CP051884.1 | Cellulomonas taurus |
| 142 | 2246357 | 2246536 | - | NZ_CP045298.1 | Paenibacillus brasilensis |
| 143 | 5673085 | 5673264 | + | NZ_CP020028.1 | Paenibacillus kribbensis |
| 144 | 3798730 | 3798909 | + | NZ_CP045295.1 | Paenibacillus cellulositrophicus |
| 145 | 7044098 | 7044277 | - | NZ_CP021780.1 | Paenibacillus donghaensis |
| 146 | 3240777 | 3240956 | + | NZ_CP016809.1 | Paenibacillus ihbetae |
| 147 | 735820 | 735996 | - | NC_009718.1 | Fervidobacterium nodosum Rt17-B1 |
| 148 | 511384 | 511605 | - | NZ_CP041694.1 | Cellulosimicrobium cellulans |
| 149 | 2256147 | 2256326 | - | NC_014377.1 | Thermosediminibacter oceani DSM 16646 |
| 150 | 4182041 | 4182274 | + | NZ_AP023439.1 | Streptomyces tuirus |
| 151 | 2094302 | 2094478 | + | NZ_CP011232.1 | Kosmotoga pacifica |
| 152 | 2824877 | 2825098 | - | NZ_CP035495.1 | Xylanimonas allomyrinae |
| 153 | 6575108 | 6575344 | + | NZ_CP048882.1 | Streptomyces bathyalis |
| 154 | 1315568 | 1315744 | - | NC_013170.1 | Cryptobacterium curtum DSM 15641 |
| 155 | 4809158 | 4809400 | + | NZ_CP051486.1 | Streptomyces pratensis |
| 156 | 3739059 | 3739304 | + | NZ_CP023696.1 | Streptomyces fradiae ATCC 10745 = DSM 40063 |
| 157 | 1895357 | 1895536 | - | NZ_CP048429.1 | Paenibacillus jilunlii |
| 158 | 7149888 | 7150067 | - | NZ_CP009287.1 | Paenibacillus graminis |
| 159 | 1853593 | 1853772 | - | NZ_CP068595.1 | Paenibacillus sonchi |
| 160 | 7902829 | 7903008 | - | NZ_LN831776.1 | Paenibacillus riograndensis SBR5 |
| 161 | 3587931 | 3588176 | + | NZ_CP017316.1 | Streptomyces rubrolavendulae |
| 162 | 4489948 | 4490181 | - | NC_013929.1 | Streptomyces scabiei 87.22 |
| 163 | 246521 | 246712 | + | NZ_LS483427.1 | Arcanobacterium haemolyticum |
| 164 | 1405974 | 1406153 | - | NZ_AP018712.1 | Tepiditoga spiralis |
| 165 | 3764608 | 3764802 | - | NZ_CP054614.1 | Paenibacillus barcinonensis |
| 166 | 1746643 | 1746837 | - | NZ_CP065050.1 | Streptomyces solisilvae |
| 167 | 121910 | 122104 | + | NZ_CP017237.1 | Moorella thermoacetica |
| 168 | 19015 | 19218 | + | NC_022567.1 | Adlercreutzia equolifaciens DSM 19450 |
| 169 | 1909126 | 1909302 | + | NZ_CP016895.1 | Acinetobacter larvae |
| 170 | 1139669 | 1139845 | + | NZ_CP043420.1 | Kushneria phosphatilytica |
| 171 | 701917 | 702090 | + | NZ_CP014159.1 | Aerococcus christensenii |
| 172 | 2707966 | 2708187 | - | NZ_LS483423.1 | Jonesia denitrificans |
| 173 | 2536506 | 2536682 | + | NZ_CP021323.1 | Kushneria konosiri |
| 174 | 669647 | 669823 | - | NZ_CP021358.1 | Kushneria marisflavi |
| 175 | 4956513 | 4956749 | + | NZ_CP023691.1 | Streptomyces platensis |
| 176 | 2370893 | 2371117 | - | NC_014220.1 | Syntrophothermus lipocalidus DSM 12680 |
| 177 | 6796130 | 6796309 | - | NZ_CP009428.1 | Paenibacillus odorifer |
| 178 | 32306 | 32479 | + | NC_013204.1 | Eggerthella lenta DSM 2243 |
| 179 | 2315652 | 2315828 | - | NZ_AP018933.1 | Zymobacter palmae |
| 180 | 1589982 | 1590203 | - | NZ_CP007519.1 | Trueperella pyogenes |
| 181 | 3608357 | 3608593 | - | NZ_CP011502.1 | Aeromicrobium erythreum |
| 182 | 1067360 | 1067554 | + | NC_022600.1 | Gloeobacter kilaueensis JS1 |
| 183 | 1981755 | 1981940 | - | NZ_AP012273.1 | Thiolapillus brandeum |
| 184 | 3070373 | 3070609 | - | NZ_CP031356.1 | Brachybacterium saurashtrense |
| 185 | 3936138 | 3936374 | + | NZ_CP023564.1 | Brachybacterium ginsengisoli |
| 186 | 3311179 | 3311370 | - | NZ_CP018477.1 | Thermogutta terrifontis |
| 187 | 1946102 | 1946275 | + | NC_009767.1 | Roseiflexus castenholzii DSM 13941 |
| 188 | 3629053 | 3629286 | - | NZ_CP010849.1 | Streptomyces cyaneogriseus subsp. noncyanogenus |
| 189 | 5142336 | 5142536 | - | NC_009380.1 | Salinispora tropica CNB-440 |
| 190 | 1881906 | 1882085 | - | NC_014657.1 | Caldicellulosiruptor owensensis OL |
| 191 | 3585441 | 3585677 | - | NC_013172.1 | Brachybacterium faecium DSM 4810 |
| 192 | 5506879 | 5507079 | - | NZ_CP045309.1 | Micromonospora terminaliae |
| 193 | 2256169 | 2256348 | - | NZ_CP011058.1 | Paenibacillus beijingensis |
| 194 | 1279813 | 1280034 | - | NC_012968.1 | Methylotenera mobilis JLW8 |
| 195 | 5716032 | 5716217 | + | NZ_CP034539.1 | Streptomyces cyaneochromogenes |
| 196 | 9514922 | 9515152 | - | NZ_CP063373.1 | Streptomyces ferrugineus |
| 197 | 2120420 | 2120599 | - | NC_013385.1 | Ammonifex degensii KC4 |
| 198 | 2889060 | 2889239 | - | NC_020134.1 | Thermoclostridium stercorarium subsp. stercorarium DSM 8532 |
| 199 | 236236 | 236445 | + | NZ_CP048649.1 | Aminipila butyrica |
| 200 | 3548116 | 3548310 | - | NC_006177.1 | Symbiobacterium thermophilum IAM 14863 |
| 201 | 1200126 | 1200305 | + | NZ_CP021425.1 | Oleiphilus messinensis |
| 202 | 10218 | 10418 | + | NZ_CP039712.1 | Vagococcus zengguangii |
| 203 | 533377 | 533550 | + | NZ_AP017372.2 | Halorhodospira halochloris |
| 204 | 1622401 | 1622616 | + | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 205 | 655350 | 655586 | + | NZ_CP023563.1 | Brachybacterium vulturis |
| 206 | 2027290 | 2027469 | - | NC_014392.1 | Caldicellulosiruptor obsidiansis OB47 |
| 207 | 738193 | 738366 | - | NC_008789.1 | Halorhodospira halophila SL1 |
| 208 | 2446025 | 2446201 | + | NZ_CP018139.1 | Halomonas aestuarii |
| 209 | 770361 | 770537 | + | NZ_CP021435.1 | Halomonas beimenensis |
| 210 | 520626 | 520847 | + | NZ_LT906453.1 | Dermatophilus congolensis |
| 211 | 4626725 | 4626943 | - | NC_010001.1 | Lachnoclostridium phytofermentans ISDg |
| 212 | 946368 | 946544 | + | NZ_CP013106.1 | Halomonas huangheensis |
| 213 | 586564 | 586770 | + | NZ_CP007154.1 | Mycoplasma bovoculi M165/69 |
| 214 | 7131584 | 7131790 | + | NZ_CP010407.1 | Streptomyces vietnamensis |
| 215 | 1619878 | 1620048 | + | NZ_CP048436.1 | Flavonifractor plautii |
| 216 | 357810 | 358004 | + | NC_018024.1 | Acetomicrobium mobile DSM 13181 |
| 217 | 2697796 | 2697975 | + | NZ_CP025286.1 | Ethanoligenens harbinense YUAN-3 |
| 218 | 994467 | 994643 | + | NZ_CP065435.1 | Halomonas sp. SS10-MC5 |
| 219 | 7507684 | 7507890 | - | NZ_CP027306.1 | Streptomyces atratus |
| 220 | 2670838 | 2671011 | - | NZ_LR134378.1 | Lautropia mirabilis |
| 221 | 3710764 | 3710985 | - | NC_013530.1 | Xylanimonas cellulosilytica DSM 15894 |
| 222 | 2963810 | 2963986 | - | NC_014532.2 | Halomonas elongata DSM 2581 |
| 223 | 2403414 | 2403635 | - | NZ_CP044548.2 | Janibacter melonis |
| 224 | 5835375 | 5835545 | - | NC_016584.1 | Desulfosporosinus orientis DSM 765 |
| 225 | 833353 | 833529 | + | NZ_AP018724.1 | Sulfurivermis fontis |
| 226 | 3368676 | 3368855 | - | NC_014098.1 | Kyrpidia tusciae DSM 2912 |
| 227 | 418150 | 418326 | - | NZ_CP048812.1 | Halomonas socia |
| 228 | 3975101 | 3975334 | + | NZ_CP022310.1 | Streptomyces calvus |
| 229 | 687754 | 687933 | + | NC_013522.1 | Thermanaerovibrio acidaminovorans DSM 6589 |
| 230 | 366402 | 366623 | - | NZ_CP022753.1 | Nocardiopsis gilva YIM 90087 |
| 231 | 1610662 | 1610856 | - | NZ_CP054599.1 | Sulfitobacter pseudonitzschiae |
| 232 | 1344467 | 1344661 | + | NZ_CP022196.1 | Celeribacter ethanolicus |
| 233 | 3335716 | 3335895 | - | NZ_CP024955.1 | Kyrpidia spormannii |
| 234 | 569899 | 570072 | + | NC_022664.1 | Spiribacter curvatus |
| 235 | 1812258 | 1812473 | - | NC_022357.1 | Sulfuricella denitrificans skB26 |
| 236 | 5919639 | 5919875 | + | NZ_CP034463.1 | Streptomyces aquilus |
| 237 | 832431 | 832664 | + | NC_014246.1 | Mobiluncus curtisii ATCC 43063 |
| 238 | 8083903 | 8084082 | - | NZ_CP034235.1 | Paenibacillus psychroresistens |
| 239 | 1774370 | 1774555 | - | NZ_CP034438.1 | Flaviflexus salsibiostraticola |
| 240 | 405443 | 405649 | + | NC_015161.1 | Deinococcus proteolyticus MRP |
| 241 | 2896190 | 2896414 | - | NC_008346.1 | Syntrophomonas wolfei subsp. wolfei str. Goettingen G311 |
| 242 | 1698189 | 1698383 | + | NZ_CP015230.1 | Epibacterium mobile F1926 |
| 243 | 11416 | 11598 | - | NC_012526.1 | Deinococcus deserti VCD115 |
| 244 | 1638481 | 1638660 | + | NZ_AP019551.1 | Athalassotoga saccharophila |
| 245 | 4337237 | 4337422 | - | NZ_CP032427.1 | Streptomyces griseorubiginosus |
| 246 | 3084716 | 3084889 | - | NC_014315.1 | Nitrosococcus watsonii C-113 |
| 247 | 889688 | 889879 | + | NC_008148.1 | Rubrobacter xylanophilus DSM 9941 |
| 248 | 2751781 | 2751957 | - | NZ_CP051183.1 | Bermanella marisrubri |
| 249 | 244659 | 244832 | + | NC_007484.1 | Nitrosococcus oceani ATCC 19707 |
| 250 | 1233108 | 1233290 | - | NC_011959.1 | Thermomicrobium roseum DSM 5159 |
| 251 | 3657855 | 3658091 | - | NZ_CP038213.1 | Ornithinimicrobium flavum |
| 252 | 3399757 | 3399927 | - | NZ_CP033325.1 | Georgenia faecalis |
| 253 | 562060 | 562233 | + | NC_021291.1 | Spiribacter salinus M19-40 |
| 254 | 1589179 | 1589397 | - | NC_014207.1 | Methylotenera versatilis 301 |
| 255 | 816304 | 816516 | - | NZ_CP024962.1 | Entomoplasma freundtii |
| 256 | 1754278 | 1754493 | - | NC_013959.1 | Sideroxydans lithotrophicus ES-1 |
| 257 | 1448101 | 1448277 | + | NZ_CP020038.1 | Agarilytica rhodophyticola |
| 258 | 1162896 | 1163114 | - | NZ_CP022132.1 | Francisella halioticida |
| 259 | 1239709 | 1239927 | - | NZ_CP016796.1 | Francisella uliginis |
| 260 | 786145 | 786363 | + | NZ_CP022375.1 | Francisella opportunistica |
| 261 | 3178127 | 3178306 | - | NZ_CP041046.1 | Luteibacter pinisoli |
| 262 | 1315280 | 1315498 | - | NZ_CP009654.1 | Francisella frigiditurris |
| 263 | 3280122 | 3280343 | - | NC_015588.1 | Isoptericola variabilis 225 |
| 264 | 557128 | 557304 | + | NZ_CP037951.1 | Parashewanella tropica |
| 265 | 1093597 | 1093815 | + | NZ_CP021781.1 | Francisella adeliensis |
| 266 | 878212 | 878418 | - | NZ_CP042829.1 | Tepidiforma bonchosmolovskayae |
| 267 | 122924 | 123100 | - | NZ_CP060092.1 | Teredinibacter purpureus |
| 268 | 4480332 | 4480565 | + | NZ_CP063374.1 | Streptomyces chromofuscus |
| 269 | 1239416 | 1239589 | + | NZ_CP046415.1 | Guyparkeria halophila |
| 270 | 1070293 | 1070472 | - | NC_017449.1 | Francisella hispaniensis |
| 271 | 2868162 | 2868377 | - | NZ_CP027286.1 | Clostridium chauvoei |
| 272 | 372853 | 373029 | + | NZ_AP018721.1 | Sulfuritortus calidifontis |
| 273 | 4150393 | 4150614 | - | NC_014165.1 | Thermobispora bispora DSM 43833 |
| 274 | 4124778 | 4124957 | - | NZ_CP011663.1 | Clostridium sporogenes |
| 275 | 2325233 | 2325403 | - | NC_015437.1 | Selenomonas sputigena ATCC 35185 |
| 276 | 606715 | 606933 | - | NZ_CP012505.1 | Francisella persica ATCC VR-331 |
| 277 | 1799064 | 1799243 | - | NZ_CP014841.1 | Dyella thiooxydans |
| 278 | 4897121 | 4897315 | - | NC_018068.1 | Desulfosporosinus acidiphilus SJ4 |
| 279 | 2412346 | 2412528 | - | NC_006085.1 | Cutibacterium acnes KPA171202 |
| 280 | 1711118 | 1711333 | - | NZ_CP023671.1 | Clostridium septicum |
| 281 | 4447488 | 4447718 | - | NZ_CP023689.1 | Streptomyces chartreusis |
| 282 | 1973776 | 1973964 | - | NZ_CP016022.1 | Ralstonia insidiosa |
| 283 | 2361043 | 2361219 | - | NZ_CP014226.1 | Halomonas chromatireducens |
| 284 | 392215 | 392427 | - | NZ_LT906441.1 | Cutibacterium granulosum |
| 285 | 117622 | 117873 | + | NZ_AP022570.1 | Mycolicibacterium poriferae |
| 286 | 633795 | 633968 | + | NC_008340.1 | Alkalilimnicola ehrlichii MLHE-1 |
| 287 | 3494187 | 3494423 | - | NC_015671.1 | Cellulomonas gilvus ATCC 13127 |
| 288 | 2565568 | 2565762 | - | NZ_CP045798.1 | Thermoanaerosceptrum fracticalcis |
| 289 | 3813797 | 3813991 | - | NC_014550.1 | Glutamicibacter arilaitensis Re117 |
| 290 | 5598738 | 5598932 | - | NC_013510.1 | Thermomonospora curvata DSM 43183 |
| 291 | 4844703 | 4844897 | - | NC_018515.1 | Desulfosporosinus meridiei DSM 13257 |
| 292 | 1968851 | 1969030 | - | NZ_LT635455.1 | Olsenella timonensis |
| 293 | 2023796 | 2023975 | - | NZ_CP029822.1 | Entomomonas moraniae |
| 294 | 344067 | 344240 | + | NZ_LT821227.1 | Phoenicibacter congonensis |
| 295 | 5873878 | 5874078 | + | NC_008726.1 | Mycolicibacterium vanbaalenii PYR-1 |
| 296 | 4213201 | 4213371 | - | NZ_CP061007.1 | Saccharopolyspora spinosa |
| 297 | 5759346 | 5759516 | + | NZ_CP031142.1 | Saccharopolyspora pogona |
| 298 | 337475 | 337657 | + | NZ_CP025198.1 | Acidipropionibacterium virtanenii |
| 299 | 1288807 | 1288986 | + | NC_020541.1 | Rhodanobacter denitrificans |
| 300 | 3263978 | 3264172 | - | NZ_CP034412.1 | Glutamicibacter creatinolyticus |
| 301 | 3601213 | 3601407 | - | NZ_CP033081.1 | Glutamicibacter nicotianae |
| 302 | 864785 | 864964 | + | NZ_CP071517.1 | Lysobacter arenosi |
| 303 | 3638625 | 3638858 | + | NZ_CP072827.1 | Streptomyces mobaraensis NBRC 13819 = DSM 40847 |
| 304 | 4585945 | 4586181 | - | NZ_CP023699.1 | Streptomyces kanamyceticus |
| 305 | 2380921 | 2381100 | - | NZ_CP053627.1 | Xylella taiwanensis |
| 306 | 828325 | 828504 | + | NZ_CP029556.1 | Lysobacter oculi |
| 307 | 1875143 | 1875319 | - | NZ_CP060713.1 | Nocardioides mesophilus |
| 308 | 1607192 | 1607389 | + | NZ_LN681225.1 | Legionella hackeliae |
| 309 | 7321120 | 7321368 | - | NZ_CP024957.1 | Streptomyces cavourensis |
| 310 | 7694776 | 7695018 | - | NC_021177.1 | Streptomyces fulvissimus DSM 40593 |
| 311 | 7835399 | 7835641 | - | NZ_CP020563.1 | Kitasatospora albolonga |
| 312 | 2966217 | 2966432 | + | NZ_CP011451.1 | Nitrosomonas communis |
| 313 | 5693809 | 5694048 | + | NZ_CP022744.1 | Streptomyces lincolnensis |
| 314 | 3439062 | 3439250 | + | NZ_CP012943.1 | Ralstonia solanacearum |
| 315 | 2279620 | 2279808 | + | NZ_CP068285.1 | Ralstonia syzygii subsp. celebesensis |
| 316 | 1769291 | 1769470 | + | NZ_CP046603.1 | Lysobacter soli |
| 317 | 2829480 | 2829659 | - | NZ_LS483377.1 | Stenotrophomonas maltophilia |
| 318 | 1154575 | 1154763 | + | NZ_LR134501.1 | Nocardiopsis dassonvillei |
| 319 | 2463900 | 2464082 | + | NC_021064.1 | Cutibacterium avidum 44067 |
| 320 | 4367221 | 4367400 | - | NZ_CP062158.2 | Pseudomonas lundensis |
| 321 | 4022814 | 4022993 | - | NZ_CP012676.1 | Pseudomonas versuta |
| 322 | 162898 | 163077 | - | NZ_CP049044.1 | Pseudomonas psychrophila |
| 323 | 419145 | 419333 | - | NZ_CP020121.1 | Comamonas kerstersii |
| 324 | 3929923 | 3930102 | - | NC_015687.1 | Clostridium acetobutylicum DSM 1731 |
| 325 | 942486 | 942668 | - | NZ_CP040635.1 | Acidipropionibacterium jensenii |
| 326 | 1917804 | 1917986 | - | NZ_CP019400.1 | Acidipropionibacterium acidipropionici |
| 327 | 2412073 | 2412273 | - | NC_008578.1 | Acidothermus cellulolyticus 11B |
| 328 | 2024229 | 2024408 | + | NZ_CP019240.1 | Rhodoferax antarcticus |
| 329 | 1988904 | 1989101 | - | NZ_CP036291.1 | Pirellulimonas nuda |
| 330 | 4853852 | 4854025 | + | NZ_CP023147.1 | Mycobacterium marseillense |
| 331 | 66887 | 67057 | + | NC_018870.1 | Thermacetogenium phaeum DSM 12270 |
| 332 | 2531720 | 2531944 | + | NZ_CP038267.1 | Nocardioides euryhalodurans |
| 333 | 1721470 | 1721685 | + | NZ_CP033719.1 | Propionibacterium acidifaciens |
| 334 | 4584799 | 4585023 | - | NZ_CP059164.1 | Nocardioides ungokensis |
| 335 | 5115022 | 5115195 | + | NC_016948.1 | Mycobacterium paraintracellulare |
| 336 | 2648867 | 2649052 | + | NZ_AP022589.1 | Mycolicibacter minnesotensis |
| 337 | 1669072 | 1669296 | + | NZ_CP038436.1 | Nocardioides seonyuensis |
| 338 | 5011849 | 5012022 | + | NC_016946.1 | Mycobacterium intracellulare ATCC 13950 |
| 339 | 846322 | 846501 | - | NC_009142.1 | Saccharopolyspora erythraea NRRL 2338 |
| 340 | 2423032 | 2423247 | - | NZ_LT593929.1 | Propionibacterium freudenreichii |
| 341 | 3123981 | 3124157 | - | NC_020304.1 | Desulfocapsa sulfexigens DSM 10523 |
| 342 | 1197565 | 1197744 | - | NZ_CP012752.1 | Kibdelosporangium phytohabitans |
| 343 | 2201300 | 2201479 | - | NZ_AP022603.1 | Mycolicibacterium fallax |
| 344 | 59182 | 59376 | + | NC_000962.3 | Mycobacterium tuberculosis H37Rv |
| 345 | 59234 | 59428 | + | NC_015848.1 | Mycobacterium canettii CIPT 140010059 |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_AP019309.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01250.19 | 0.87 | 300 | 576.0 | same-strand | Ribosomal protein S6 |
| 2 | PF03948.16 | 0.63 | 217 | 46 | same-strand | Ribosomal protein L9, C-terminal domain |
| 3 | PF01281.21 | 0.63 | 218 | 41.0 | same-strand | Ribosomal protein L9, N-terminal domain |
| 4 | PF00436.27 | 0.61 | 211 | 82 | same-strand | Single-strand binding protein family |
++ More..