Result : Q2RIB6
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Exodeoxyribonuclease 7 small subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII small subunit) (Exonuclease VII small subunit) |
| NCBI Accession ID | CP000232.1 |
| Organism | Moorella thermoacetica (strain ATCC 39073 / JCM 9320) |
| Left | 1559988 |
| Right | 1560239 |
| Strand | - |
| Nucleotide Sequence | ATGCCCGAAGAGGAACAGTTGACCTTCGAAGCGGCCCTGCAAAAGCTGGAAGAAGTAGTCCAGGCCCTGGAGGGTGAAGGCCTGACCCTGGAGGATTCCCTGGCCTATTACCAGGAAGGCATTCGCCTGGTACGCCTGTGCCGGCAGCGCCTGAAAGAGGTTGAGGGTAAGCTCCAGGTGATCCTCCTCCAGGACGGGGAAGTAGTAACCAGGGAGCTCTCCCTTCCCGGGGGTGAAAACCACGGAACTTGA |
| Sequence | MPEEEQLTFEAALQKLEEVVQALEGEGLTLEDSLAYYQEGIRLVRLCRQRLKEVEGKLQVILLQDGEVVTRELSLPGGENHGT |
| Source of smORF | Swiss-Prot |
| Function | Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides. {ECO:0000255|HAMAP-Rule:MF_00337}. |
| Pubmed ID | 18631365 |
| Domain | CDD:412547 |
| Functional Category | Others |
| Uniprot ID | Q2RIB6 |
| ORF Length (Amino Acid) | 83 |
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| Conservation Analysis |
No. of Species: 10
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1535483 | 1535734 | - | NZ_CP017237.1 | Moorella thermoacetica |
| 2 | 1552673 | 1552900 | - | NZ_CP038018.1 | Eikenella exigua |
| 3 | 2270848 | 2271078 | + | NZ_CP060414.1 | Neisseria musculi |
| 4 | 1921620 | 1921847 | - | NZ_CP039887.1 | Neisseria subflava |
| 5 | 1831086 | 1831313 | + | NZ_CP039886.1 | Neisseria flavescens |
| 6 | 785405 | 785629 | + | NZ_CP012028.1 | Neisseria gonorrhoeae |
| 7 | 2218010 | 2218234 | - | NZ_CP072524.1 | Neisseria sicca |
| 8 | 1107693 | 1107917 | - | NZ_CP031325.1 | Neisseria polysaccharea |
| 9 | 313592 | 313822 | - | NZ_LT906434.1 | Neisseria zoodegmatis |
| 10 | 2121586 | 2121810 | - | NZ_CP031253.1 | Neisseria lactamica |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP017237.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00348.19 | 1.0 | 10 | -16.0 | same-strand | Polyprenyl synthetase |
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