Result : Q1RIC4
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Iron-sulfur cluster assembly protein CyaY |
| NCBI Accession ID | CP000087.1 |
| Organism | Rickettsia bellii (strain RML369-C) |
| Left | 896119 |
| Right | 896409 |
| Strand | - |
| Nucleotide Sequence | ATGAATAATAGTGAATTTAGTAAAATAGCTGAAACAGTAATTGCACATATAGCAGACAGGATTGAAGAACAAAATCAGGACATAGATGTAGACCTACAAAGCGATATATTAAGTATTGATACAACTGACGGTATATATGTAATAAATAAACAAAGTGCCGCTAAGGAAATTTGGTTATCATCTCCTGTTAGTGGACCTTATCATTTTTTCTATGAGCAAGGGAAATGGAAAAATAGAGCAGGGCTAGAGCTAATGAGTATTTTAACTGACGAGCTTGGAATTGATTTTTAA |
| Sequence | MNNSEFSKIAETVIAHIADRIEEQNQDIDVDLQSDILSIDTTDGIYVINKQSAAKEIWLSSPVSGPYHFFYEQGKWKNRAGLELMSILTDELGIDF |
| Source of smORF | Swiss-Prot |
| Function | Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis. {ECO:0000255|HAMAP-Rule:MF_00142}. |
| Pubmed ID | 16703114 |
| Domain | CDD:412249 |
| Functional Category | Metal-binding |
| Uniprot ID | Q1RIC4 |
| ORF Length (Amino Acid) | 96 |
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| Conservation Analysis |
No. of Species: 12
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 896119 | 896409 | - | NC_007940.1 | Rickettsia bellii RML369-C |
| 2 | 787678 | 787986 | - | NC_016929.1 | Rickettsia canadensis str. CA410 |
| 3 | 441073 | 441384 | + | NC_010263.3 | Rickettsia rickettsii str. Iowa |
| 4 | 437709 | 438020 | + | NC_003103.1 | Rickettsia conorii str. Malish 7 |
| 5 | 442847 | 443158 | + | NC_016639.1 | Rickettsia slovaca 13-B |
| 6 | 761125 | 761430 | - | NZ_LN794217.1 | Rickettsia monacensis |
| 7 | 1007044 | 1007349 | - | NC_017058.1 | Rickettsia australis str. Cutlack |
| 8 | 444064 | 444360 | + | NZ_AP019864.1 | Rickettsia heilongjiangensis |
| 9 | 747125 | 747430 | - | NZ_AP019563.1 | Rickettsia asiatica |
| 10 | 439581 | 439886 | + | NC_009881.1 | Rickettsia akari str. Hartford |
| 11 | 393918 | 394232 | + | NC_017049.1 | Rickettsia prowazekii str. Chernikova |
| 12 | 396637 | 396951 | + | NC_017066.1 | Rickettsia typhi str. TH1527 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_007940.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF02618.18 | 1.0 | 12 | 47.0 | same-strand | YceG-like family |
| 2 | PF02684.17 | 1.0 | 12 | 1702.0 | same-strand | Lipid-A-disaccharide synthetase |
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