Result : Q1QWP1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | (2R)-sulfolactate sulfo-lyase subunit alpha (EC 4.4.1.24) (Sulfolactate sulfo-lyase A) |
| NCBI Accession ID | CP000285.1 |
| Organism | Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11) |
| Left | 2010413 |
| Right | 2010697 |
| Strand | + |
| Nucleotide Sequence | ATGAGCATCGATTTCGTGGTCCACGACGCCGACGACGCGGTCGGCGTGGTGGTGGTGGAAGGGGTGGAGGCCGGTCAGATGCTGACCGGCTGGGTGATGGATCAGGACAGGACCCTGCAGTTCGAGGTCAAGGATGCGATCCCGATCGGCCACAAGCTGGCGATCCGCGATCTCGCCGAAGACGAGACGGTCATCAAGTACAGCGTCGATATCGGCCGGGTGGTGCAGTCGATCCGCCAGGGCGAGCACGTTCACGTTCACAATGTCAAAACCAAGAGGTGGTAA |
| Sequence | MSIDFVVHDADDAVGVVVVEGVEAGQMLTGWVMDQDRTLQFEVKDAIPIGHKLAIRDLAEDETVIKYSVDIGRVVQSIRQGEHVHVHNVKTKRW |
| Source of smORF | Swiss-Prot |
| Function | Together with SuyB, desulfonates sulfolactate to pyruvate and sulfite. {ECO:0000269|Pubmed:20007648}. |
| Pubmed ID | 22675587 20007648 |
| Domain | |
| Functional Category | Others |
| Uniprot ID | Q1QWP1 |
| ORF Length (Amino Acid) | 94 |
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| Conservation Analysis |
No. of Species: 38
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2010413 | 2010697 | + | NC_007963.1 | Chromohalobacter salexigens DSM 3043 |
| 2 | 3633739 | 3634023 | - | NZ_CP065435.1 | Halomonas sp. SS10-MC5 |
| 3 | 885037 | 885321 | + | NZ_CP021435.1 | Halomonas beimenensis |
| 4 | 4025168 | 4025452 | + | NZ_CP042941.1 | Atlantibacter hermannii |
| 5 | 571691 | 571972 | + | NZ_AP019700.1 | Stella humosa |
| 6 | 1198739 | 1199023 | + | NZ_CP021255.1 | Desulfobulbus oralis |
| 7 | 1888090 | 1888371 | + | NZ_AP014936.1 | Sulfurifustis variabilis |
| 8 | 164270 | 164503 | - | NZ_CP014055.2 | Grimontia hollisae |
| 9 | 227206 | 227436 | + | NZ_CP054626.1 | Cupriavidus gilardii |
| 10 | 1842378 | 1842662 | - | NZ_CP017415.1 | Acidihalobacter yilgarnenesis |
| 11 | 2468906 | 2469190 | + | NC_013173.1 | Desulfomicrobium baculatum DSM 4028 |
| 12 | 1065831 | 1066070 | + | NZ_CP066076.1 | Paraburkholderia ginsengisoli |
| 13 | 1007082 | 1007312 | - | NC_021289.1 | Caballeronia insecticola |
| 14 | 1587922 | 1588206 | + | NZ_CP039543.1 | Desulfovibrio marinus |
| 15 | 677440 | 677670 | + | NZ_CP046915.1 | Paraburkholderia acidisoli |
| 16 | 684507 | 684737 | + | NZ_CP046915.1 | Paraburkholderia acidisoli |
| 17 | 5481774 | 5482004 | - | NZ_CP053986.1 | Achromobacter denitrificans |
| 18 | 480369 | 480599 | - | NZ_CP038034.1 | Achromobacter insolitus |
| 19 | 2583784 | 2584050 | - | NZ_LT671418.1 | Herminiimonas arsenitoxidans |
| 20 | 1882740 | 1882970 | - | NZ_CP016172.1 | Bordetella flabilis |
| 21 | 4084682 | 4084915 | + | NZ_CP016171.1 | Bordetella bronchialis |
| 22 | 514825 | 515055 | + | NZ_CP032519.1 | Cupriavidus oxalaticus |
| 23 | 451134 | 451364 | - | NC_010170.1 | Bordetella petrii |
| 24 | 3166605 | 3166835 | + | NZ_CP011568.3 | Pandoraea thiooxydans |
| 25 | 3231611 | 3231895 | + | NZ_CP014229.1 | Desulfovibrio fairfieldensis |
| 26 | 4325376 | 4325642 | + | NZ_CP003915.1 | Advenella mimigardefordensis DPN7 |
| 27 | 4129833 | 4130066 | - | NZ_CP053069.1 | Usitatibacter rugosus |
| 28 | 3994746 | 3995027 | + | NC_017964.1 | Advenella kashmirensis WT001 |
| 29 | 90228 | 90473 | + | NC_015589.1 | Desulfotomaculum ruminis DSM 2154 |
| 30 | 1721457 | 1721702 | + | NC_015589.1 | Desulfotomaculum ruminis DSM 2154 |
| 31 | 1727869 | 1728114 | + | NC_015589.1 | Desulfotomaculum ruminis DSM 2154 |
| 32 | 623760 | 624005 | - | NC_015589.1 | Desulfotomaculum ruminis DSM 2154 |
| 33 | 956932 | 957162 | - | NZ_CP041352.1 | Casimicrobium huifangae |
| 34 | 2621031 | 2621318 | + | NZ_CP018171.1 | Mesorhizobium oceanicum |
| 35 | 3588511 | 3588744 | - | NZ_CP053073.1 | Usitatibacter palustris |
| 36 | 2097461 | 2097745 | - | NZ_AP014924.1 | Limnochorda pilosa |
| 37 | 1355634 | 1355870 | - | NZ_CP023276.1 | Polynucleobacter difficilis |
| 38 | 1409528 | 1409794 | - | NZ_CP007501.1 | Polynucleobacter duraquae |
| 39 | 3797779 | 3798012 | + | NC_011894.1 | Methylobacterium nodulans ORS 2060 |
| 40 | 995889 | 996122 | - | NC_008786.1 | Verminephrobacter eiseniae EF01-2 |
| 41 | 811953 | 812186 | + | NZ_CP015421.1 | Rhodovulum sulfidophilum |
| 42 | 334076 | 334306 | - | NZ_CP025611.1 | Niveispirillum cyanobacteriorum |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_007963.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF07702.15 | 0.66 | 25 | 222 | opposite-strand | UTRA domain |
| 2 | PF00392.23 | 0.71 | 27 | 236 | opposite-strand | Bacterial regulatory proteins, gntR family |
| 3 | PF04295.15 | 0.97 | 37 | 28 | same-strand | D-galactarate dehydratase / Altronate hydrolase, C terminus |
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