Result : Q1LTW0
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Putative membrane protein insertion efficiency factor |
| NCBI Accession ID | CP000238.1 |
| Organism | Baumannia cicadellinicola subsp. Homalodisca coagulata |
| Left | 149083 |
| Right | 149340 |
| Strand | + |
| Nucleotide Sequence | ATGGCATCGCTATTATCGCCTATAATAAAATTATTAAGCTATGTAATACGCTGTTATCAGCTTATAATTAGCCCATTAATCAAACCTCATTGTAGGTTTTTGCCTACATGTTCGCAATATAGTATTACGGCAATACACAGGTTTGGTATATTCAAAGGTATTTGGTTAACATTAATTCGTATATTAAGATGTAATCCTTGGAGTCAAGGTGGTGAAGATCAAGTACCATTAAATATCTTTGACAAAAGAGAATACTAA |
| Sequence | MASLLSPIIKLLSYVIRCYQLIISPLIKPHCRFLPTCSQYSITAIHRFGIFKGIWLTLIRILRCNPWSQGGEDQVPLNIFDKREY |
| Source of smORF | Swiss-Prot |
| Function | Could be involved in insertion of integral membrane proteins into the membrane. {ECO:0000255|HAMAP-Rule:MF_00386}. |
| Pubmed ID | 16729848 |
| Domain | CDD:412414 |
| Functional Category | Others |
| Uniprot ID | Q1LTW0 |
| ORF Length (Amino Acid) | 85 |
++ More..
| Conservation Analysis |
No. of Species: 408
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 81340 | 81597 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 2 | 3742796 | 3743053 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 3 | 4265068 | 4265325 | - | NZ_CP061511.1 | Mixta calida |
| 4 | 41784 | 42041 | - | NZ_CP026377.1 | Mixta gaviniae |
| 5 | 3388377 | 3388634 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 6 | 4144754 | 4145011 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 7 | 4305740 | 4305997 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 8 | 48408 | 48665 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 9 | 4002978 | 4003235 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 10 | 50046 | 50303 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 11 | 5067185 | 5067442 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 12 | 2825783 | 2826040 | - | NZ_CP049115.1 | Pantoea stewartii |
| 13 | 4564821 | 4565078 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 14 | 4776778 | 4777035 | - | NZ_LR134201.1 | Cedecea lapagei |
| 15 | 4585146 | 4585403 | - | NC_017554.1 | Pantoea ananatis PA13 |
| 16 | 4028387 | 4028644 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 17 | 4034663 | 4034920 | - | NZ_CP045720.1 | Pantoea eucalypti |
| 18 | 4048841 | 4049098 | - | NZ_CP038853.1 | Pantoea vagans |
| 19 | 4691231 | 4691488 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 20 | 1601977 | 1602234 | + | NZ_CP019706.1 | Pantoea alhagi |
| 21 | 3771889 | 3772146 | - | NZ_CP028271.1 | Mixta intestinalis |
| 22 | 5241329 | 5241586 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 23 | 5300710 | 5300967 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 24 | 5540913 | 5541170 | - | NZ_CP054254.1 | Klebsiella variicola |
| 25 | 3427535 | 3427792 | - | NZ_CP038469.1 | Citrobacter tructae |
| 26 | 2417996 | 2418253 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 27 | 2666781 | 2667038 | + | NZ_CP033744.1 | Citrobacter freundii |
| 28 | 5176860 | 5177117 | - | NZ_CP023525.1 | Cedecea neteri |
| 29 | 5189132 | 5189389 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 30 | 5265069 | 5265326 | - | NZ_CP041247.1 | Raoultella electrica |
| 31 | 48532 | 48789 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 32 | 6182251 | 6182508 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 33 | 1226279 | 1226536 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 34 | 4685495 | 4685752 | - | NZ_CP050150.1 | Hafnia alvei |
| 35 | 4037052 | 4037312 | - | NZ_LR134531.1 | Pragia fontium |
| 36 | 4890197 | 4890454 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 37 | 4286343 | 4286600 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 38 | 4026649 | 4026906 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 39 | 4608746 | 4609003 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 40 | 1588440 | 1588697 | + | NZ_CP007230.1 | Yersinia similis |
| 41 | 4890813 | 4891070 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 42 | 4996519 | 4996776 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 43 | 4792365 | 4792622 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 44 | 1631387 | 1631644 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 45 | 4914462 | 4914719 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 46 | 3693571 | 3693828 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 47 | 4058477 | 4058734 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 48 | 1664531 | 1664788 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 49 | 4071787 | 4072044 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 50 | 4448647 | 4448904 | - | NZ_LR134340.1 | Escherichia marmotae |
| 51 | 2449458 | 2449715 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 52 | 1855579 | 1855836 | + | NZ_CP053416.1 | Salmonella bongori |
| 53 | 2888876 | 2889133 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 54 | 4634514 | 4634771 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 55 | 3884816 | 3885073 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 56 | 3859414 | 3859671 | + | NZ_AP014857.1 | Escherichia albertii |
| 57 | 4709704 | 4709961 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 58 | 48967 | 49224 | + | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 59 | 4747406 | 4747663 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 60 | 4811953 | 4812210 | - | NC_015968.1 | Enterobacter soli |
| 61 | 2582500 | 2582757 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 62 | 4847429 | 4847686 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 63 | 3233296 | 3233553 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 64 | 4046178 | 4046435 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 65 | 3565559 | 3565816 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 66 | 1367078 | 1367335 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 67 | 5110091 | 5110348 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 68 | 4261530 | 4261787 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 69 | 456657 | 456914 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 70 | 1801188 | 1801445 | - | NZ_CP011254.1 | Serratia fonticola |
| 71 | 1732750 | 1733007 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 72 | 5597097 | 5597354 | - | NZ_CP050508.1 | Raoultella terrigena |
| 73 | 3486254 | 3486511 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 74 | 4771184 | 4771441 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 75 | 1722742 | 1722999 | + | NZ_CP026047.1 | Raoultella planticola |
| 76 | 5574299 | 5574556 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 77 | 3648463 | 3648720 | - | NZ_CP067057.1 | Rahnella aceris |
| 78 | 4630515 | 4630775 | - | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 79 | 911389 | 911646 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 80 | 5038383 | 5038640 | + | NZ_CP071320.1 | Serratia ureilytica |
| 81 | 4462205 | 4462462 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 82 | 5208483 | 5208740 | - | NZ_LT906479.1 | Serratia ficaria |
| 83 | 5255138 | 5255395 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 84 | 5441580 | 5441837 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 85 | 4994484 | 4994741 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 86 | 4569798 | 4570055 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 87 | 3840203 | 3840463 | - | NZ_CP029185.2 | Limnobaculum parvum |
| 88 | 4671174 | 4671431 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 89 | 4157224 | 4157481 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 90 | 4617056 | 4617313 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 91 | 4606018 | 4606275 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 92 | 3213546 | 3213803 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 93 | 5414819 | 5415076 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 94 | 5315244 | 5315501 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 95 | 1767472 | 1767726 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 96 | 4485863 | 4486105 | - | NZ_CP015581.1 | Tatumella citrea |
| 97 | 3810903 | 3811157 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 98 | 1740556 | 1740810 | - | NZ_CP023706.1 | Edwardsiella tarda |
| 99 | 3810120 | 3810374 | - | NZ_CP016043.1 | Edwardsiella hoshinae |
| 100 | 2511324 | 2511581 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 101 | 3858315 | 3858572 | - | NZ_CP065534.1 | Lonsdalea populi |
| 102 | 476539 | 476796 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 103 | 1142062 | 1142319 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 104 | 4684307 | 4684564 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 105 | 3121188 | 3121445 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 106 | 4879155 | 4879412 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 107 | 3775205 | 3775447 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 108 | 2158907 | 2159164 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 109 | 1508218 | 1508475 | - | NZ_CP065640.1 | Serratia rubidaea |
| 110 | 4853100 | 4853357 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 111 | 2782059 | 2782316 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 112 | 5687792 | 5688052 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 113 | 4315739 | 4315996 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 114 | 4738908 | 4739165 | - | NZ_CP025799.1 | Dickeya zeae |
| 115 | 4812474 | 4812731 | - | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 116 | 3974675 | 3974884 | - | NZ_LS483470.1 | Leminorella richardii |
| 117 | 895653 | 895904 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 118 | 4907548 | 4907805 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 119 | 3423167 | 3423424 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 120 | 4364984 | 4365244 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 121 | 3852968 | 3853210 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 122 | 4678254 | 4678511 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 123 | 4279371 | 4279631 | - | NZ_CP048796.1 | Providencia vermicola |
| 124 | 1568150 | 1568410 | - | NZ_CP026364.1 | Proteus hauseri |
| 125 | 4448675 | 4448932 | + | NZ_LT615367.1 | Dickeya aquatica |
| 126 | 3943373 | 3943633 | - | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 127 | 3299588 | 3299845 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 128 | 3444353 | 3444613 | - | NC_010554.1 | Proteus mirabilis HI4320 |
| 129 | 4284399 | 4284659 | - | NZ_LS483422.1 | Providencia heimbachae |
| 130 | 31338 | 31607 | - | NZ_CP029331.1 | Thauera hydrothermalis |
| 131 | 1063541 | 1063807 | + | NZ_LR134510.1 | Actinobacillus delphinicola |
| 132 | 4702421 | 4702678 | + | NZ_CP032487.1 | Yersinia hibernica |
| 133 | 2844527 | 2844784 | + | NZ_CP009787.1 | Yersinia rohdei |
| 134 | 2720223 | 2720480 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 135 | 1278600 | 1278857 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 136 | 4671320 | 4671577 | + | NZ_CP043727.1 | Yersinia canariae |
| 137 | 4734092 | 4734349 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 138 | 3786307 | 3786567 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 139 | 5063433 | 5063693 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 140 | 737693 | 737908 | + | NC_013522.1 | Thermanaerovibrio acidaminovorans DSM 6589 |
| 141 | 1041076 | 1041336 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 142 | 791838 | 792098 | + | NZ_CP029736.1 | Providencia rettgeri |
| 143 | 5316293 | 5316550 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 144 | 5375323 | 5375580 | - | NZ_LR134494.1 | Serratia quinivorans |
| 145 | 4752805 | 4753062 | - | NZ_CP046293.1 | Yersinia intermedia |
| 146 | 4224192 | 4224419 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 147 | 3118787 | 3118999 | - | NZ_CP014223.1 | Anaerotignum propionicum DSM 1682 |
| 148 | 3867685 | 3867942 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 149 | 4221000 | 4221254 | - | NZ_CP037951.1 | Parashewanella tropica |
| 150 | 3658166 | 3658384 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 151 | 329691 | 329948 | - | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 152 | 338191 | 338448 | - | NZ_CP070624.1 | Photobacterium damselae subsp. damselae |
| 153 | 2285533 | 2285790 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 154 | 1660927 | 1661169 | + | NZ_CP021377.1 | Oceanisphaera profunda |
| 155 | 1862411 | 1862626 | + | NC_011852.1 | Glaesserella parasuis SH0165 |
| 156 | 136030 | 136290 | - | NZ_CP018804.1 | Histophilus somni |
| 157 | 301088 | 301348 | - | NZ_CP016605.1 | Bisgaardia hudsonensis |
| 158 | 956625 | 956888 | - | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 159 | 4194540 | 4194758 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 160 | 4668110 | 4668322 | - | NC_012669.1 | Beutenbergia cavernae DSM 12333 |
| 161 | 1456413 | 1456622 | - | NZ_CP046027.1 | Neisseria brasiliensis |
| 162 | 1413969 | 1414181 | - | NZ_CP031252.1 | Neisseria elongata |
| 163 | 1890260 | 1890520 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 164 | 2180348 | 2180608 | - | NZ_LT906463.1 | Haemophilus pittmaniae |
| 165 | 15042 | 15296 | - | NC_011566.1 | Shewanella piezotolerans WP3 |
| 166 | 3905 | 4162 | - | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 167 | 260121 | 260351 | + | NZ_CP037755.1 | Pseudocnuella soli |
| 168 | 2578136 | 2578384 | + | NZ_CP034759.1 | Litorilituus sediminis |
| 169 | 2279285 | 2279527 | - | NZ_CP021376.1 | Oceanisphaera avium |
| 170 | 4647466 | 4647720 | - | NZ_CP041036.1 | Shewanella polaris |
| 171 | 51580 | 51840 | - | NZ_CP015031.1 | Basfia succiniciproducens |
| 172 | 446826 | 447086 | - | NC_006300.1 | [Mannheimia] succiniciproducens MBEL55E |
| 173 | 3474221 | 3474475 | + | NZ_CP051180.1 | Ferrimonas lipolytica |
| 174 | 1914884 | 1915132 | + | NZ_CP020465.1 | Cognaticolwellia beringensis |
| 175 | 5173629 | 5173883 | - | NC_009901.1 | Shewanella pealeana ATCC 700345 |
| 176 | 1154715 | 1154981 | - | NC_015559.1 | Marinomonas posidonica IVIA-Po-181 |
| 177 | 1927442 | 1927702 | - | NZ_LS483458.1 | Haemophilus haemolyticus |
| 178 | 4544724 | 4544978 | - | NC_007954.1 | Shewanella denitrificans OS217 |
| 179 | 2670805 | 2671023 | + | NZ_CP042435.1 | Panacibacter ginsenosidivorans |
| 180 | 3574653 | 3574901 | - | NZ_CP051883.1 | Aeromonas salmonicida |
| 181 | 1293463 | 1293684 | - | NZ_CP072425.1 | Pseudoalteromonas viridis |
| 182 | 5225827 | 5226081 | - | NC_010334.1 | Shewanella halifaxensis HAW-EB4 |
| 183 | 4075904 | 4076152 | - | NC_013861.1 | Legionella longbeachae NSW150 |
| 184 | 1870308 | 1870544 | + | NC_016630.1 | Filifactor alocis ATCC 35896 |
| 185 | 541081 | 541302 | + | NZ_CP031699.1 | Neisseria animalis |
| 186 | 4762818 | 4763066 | - | NZ_CP050851.1 | Aeromonas hydrophila |
| 187 | 4538767 | 4539015 | - | NZ_LR134376.1 | Aeromonas encheleia |
| 188 | 3698464 | 3698712 | + | NZ_CP040449.1 | Aeromonas simiae |
| 189 | 3916900 | 3917112 | - | NC_010814.1 | Geobacter lovleyi SZ |
| 190 | 5467559 | 5467813 | - | NZ_CP037952.1 | Parashewanella spongiae |
| 191 | 3210227 | 3210475 | + | NZ_CP044060.1 | Aeromonas veronii |
| 192 | 3474983 | 3475231 | + | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 193 | 4754800 | 4755048 | - | NZ_AP022188.1 | Aeromonas media |
| 194 | 319810 | 320031 | - | NC_009952.1 | Dinoroseobacter shibae DFL 12 = DSM 16493 |
| 195 | 844408 | 844668 | - | NZ_CP040863.1 | Rodentibacter heylii |
| 196 | 808737 | 808955 | + | NC_009828.1 | Pseudothermotoga lettingae TMO |
| 197 | 801902 | 802120 | + | NC_022792.1 | Pseudothermotoga elfii DSM 9442 = NBRC 107921 |
| 198 | 246218 | 246472 | - | NZ_CP034015.1 | Shewanella livingstonensis |
| 199 | 3463727 | 3463975 | - | NC_011901.1 | Thioalkalivibrio sulfidiphilus HL-EbGr7 |
| 200 | 228266 | 228481 | + | NZ_CP015439.1 | Anoxybacillus amylolyticus |
| 201 | 2993585 | 2993842 | + | NZ_CP016414.1 | Vibrio scophthalmi |
| 202 | 2147438 | 2147668 | + | NZ_CP060822.1 | Cylindrospermopsis curvispora GIHE-G1 |
| 203 | 6724401 | 6724622 | - | NZ_LR134338.1 | Brevibacillus brevis |
| 204 | 4844107 | 4844361 | - | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 205 | 3177067 | 3177288 | - | NZ_CP017704.1 | Peribacillus simplex NBRC 15720 = DSM 1321 |
| 206 | 576346 | 576573 | + | NC_018024.1 | Acetomicrobium mobile DSM 13181 |
| 207 | 2021677 | 2021940 | - | NZ_LS483443.1 | Aggregatibacter segnis ATCC 33393 |
| 208 | 2286157 | 2286417 | - | NZ_LT906448.1 | Pasteurella dagmatis |
| 209 | 549081 | 549290 | + | NZ_CP026363.1 | Brevibacillus agri |
| 210 | 3213781 | 3214032 | - | NZ_CP029347.1 | Saliniradius amylolyticus |
| 211 | 503224 | 503484 | + | NZ_CP028926.1 | Pasteurella multocida |
| 212 | 2509276 | 2509509 | + | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 213 | 3295897 | 3296115 | + | NC_018012.1 | Thiocystis violascens DSM 198 |
| 214 | 2870500 | 2870757 | - | NZ_AP019657.1 | Vibrio ponticus |
| 215 | 639933 | 640187 | + | NZ_CP011403.1 | Ligilactobacillus salivarius str. Ren |
| 216 | 541761 | 541967 | - | NZ_CP041694.1 | Cellulosimicrobium cellulans |
| 217 | 4213364 | 4213591 | - | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 218 | 4170837 | 4171085 | - | NZ_CP012621.1 | Zobellella denitrificans |
| 219 | 1952343 | 1952555 | - | NZ_CP038018.1 | Eikenella exigua |
| 220 | 69518 | 69748 | - | NZ_CP015772.1 | Niabella ginsenosidivorans |
| 221 | 3438 | 3695 | + | NZ_AP019651.1 | Vibrio taketomensis |
| 222 | 5372030 | 5372278 | - | NC_003910.7 | Colwellia psychrerythraea 34H |
| 223 | 2565286 | 2565507 | - | NZ_CP072524.1 | Neisseria sicca |
| 224 | 1962526 | 1962750 | + | NC_022795.1 | Pseudothermotoga hypogea DSM 11164 = NBRC 106472 |
| 225 | 2194644 | 2194865 | - | NZ_CP039887.1 | Neisseria subflava |
| 226 | 2019453 | 2019677 | - | NZ_AP017312.1 | Aneurinibacillus soli |
| 227 | 3243105 | 3243335 | + | NZ_LT906459.1 | Odoribacter splanchnicus |
| 228 | 2500691 | 2500900 | - | NZ_CP059565.1 | Neisseria wadsworthii |
| 229 | 3187454 | 3187708 | - | NZ_CP041783.1 | Shewanella donghaensis |
| 230 | 3424405 | 3424662 | + | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 231 | 3520000 | 3520233 | - | NZ_CP068053.1 | Peribacillus psychrosaccharolyticus |
| 232 | 243018 | 243260 | - | NZ_CP068345.1 | Succinivibrio dextrinosolvens |
| 233 | 402677 | 402916 | - | NZ_CP014342.1 | Geobacillus subterraneus |
| 234 | 2686119 | 2686346 | + | NZ_CP046603.1 | Lysobacter soli |
| 235 | 167849 | 168103 | + | NZ_CP026671.1 | Leptospira borgpetersenii serovar Ceylonica |
| 236 | 3465812 | 3466069 | - | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 237 | 5347258 | 5347530 | + | NC_019751.1 | Calothrix sp. PCC 6303 |
| 238 | 3610258 | 3610488 | - | NZ_CP033065.1 | Pseudoalteromonas agarivorans |
| 239 | 3668011 | 3668241 | - | NZ_CP023464.1 | Pseudoalteromonas atlantica |
| 240 | 3719331 | 3719561 | - | NZ_CP011028.1 | Pseudoalteromonas espejiana DSM 9414 |
| 241 | 2727954 | 2728211 | + | NZ_CP014035.2 | Vibrio fluvialis |
| 242 | 1090070 | 1090303 | - | NZ_CP070511.1 | Parageobacillus toebii |
| 243 | 6402 | 6656 | - | NZ_CP022358.1 | Shewanella bicestrii |
| 244 | 490448 | 490669 | - | NZ_CP071517.1 | Lysobacter arenosi |
| 245 | 2229390 | 2229650 | - | NZ_LR134167.1 | Avibacterium volantium |
| 246 | 683356 | 683598 | + | NC_016605.1 | Pediococcus claussenii ATCC BAA-344 |
| 247 | 1618917 | 1619147 | + | NZ_CP007389.1 | Thermosipho melanesiensis |
| 248 | 3051182 | 3051391 | - | NZ_LR134379.1 | Slackia heliotrinireducens |
| 249 | 4350585 | 4350794 | - | NZ_CP013019.1 | Clostridium pasteurianum |
| 250 | 4988853 | 4989107 | - | NZ_CP046378.1 | Shewanella algae |
| 251 | 3344366 | 3344575 | - | NZ_CP048104.1 | Kroppenstedtia pulmonis |
| 252 | 2238268 | 2238516 | - | NZ_HF545616.1 | Ruminococcus bicirculans |
| 253 | 2870430 | 2870690 | - | NZ_CP022741.1 | Vibrio qinghaiensis |
| 254 | 1824013 | 1824270 | + | NZ_CP046793.1 | Vibrio metschnikovii |
| 255 | 5132978 | 5133202 | - | NC_014501.1 | Gloeothece verrucosa PCC 7822 |
| 256 | 1392710 | 1392940 | + | NC_018704.1 | Amphibacillus xylanus NBRC 15112 |
| 257 | 879590 | 879802 | - | NC_014836.1 | Desulfurispirillum indicum S5 |
| 258 | 3167122 | 3167349 | + | NZ_LS483476.1 | Lederbergia lentus |
| 259 | 4064515 | 4064727 | - | NZ_AP017928.1 | Methylocaldum marinum |
| 260 | 9581 | 9835 | - | NC_008700.1 | Shewanella amazonensis SB2B |
| 261 | 3648539 | 3648748 | - | NZ_LR590470.1 | Sphingobacterium daejeonense |
| 262 | 1670386 | 1670595 | + | NZ_CP049246.1 | Sphingobacterium lactis |
| 263 | 133209 | 133430 | - | NZ_CP045871.1 | Litoricola lipolytica |
| 264 | 147053 | 147310 | - | NZ_CP044069.1 | Vibrio vulnificus |
| 265 | 5286966 | 5287220 | - | NC_016901.1 | Shewanella baltica OS678 |
| 266 | 4974804 | 4975058 | - | NZ_CP020472.1 | Shewanella japonica |
| 267 | 3631934 | 3632164 | - | NZ_CP027523.1 | Pseudoalteromonas carrageenovora |
| 268 | 999647 | 999877 | - | NZ_CP030142.1 | Leptospira mayottensis |
| 269 | 4129530 | 4129784 | - | NZ_CP020373.1 | Shewanella khirikhana |
| 270 | 1542989 | 1543225 | - | NC_013203.1 | Lancefieldella parvulum DSM 20469 |
| 271 | 2081157 | 2081450 | - | NZ_CP006954.1 | Bibersteinia trehalosi USDA-ARS-USMARC-188 |
| 272 | 1135974 | 1136210 | - | NC_009718.1 | Fervidobacterium nodosum Rt17-B1 |
| 273 | 2568308 | 2568517 | - | NZ_LR134313.1 | Neisseria canis |
| 274 | 1851631 | 1851909 | - | NZ_CP016604.1 | Otariodibacter oris |
| 275 | 4236575 | 4236829 | - | NZ_CP069213.1 | Shewanella litorisediminis |
| 276 | 1087523 | 1087735 | + | NZ_LT906482.1 | Eikenella corrodens |
| 277 | 3213618 | 3213866 | - | NC_007481.1 | Pseudoalteromonas translucida |
| 278 | 3519874 | 3520122 | - | NZ_CP011036.1 | Pseudoalteromonas nigrifaciens |
| 279 | 2600398 | 2600655 | + | NZ_CP035688.1 | Vibrio metoecus |
| 280 | 3219 | 3476 | + | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 281 | 2493601 | 2493849 | - | NZ_CP010975.1 | Kangiella geojedonensis |
| 282 | 1304813 | 1305058 | - | NC_008525.1 | Pediococcus pentosaceus ATCC 25745 |
| 283 | 2897914 | 2898171 | - | NZ_CP033078.1 | Vibrio zhugei |
| 284 | 2488535 | 2488777 | + | NZ_CP022743.1 | Mucilaginibacter xinganensis |
| 285 | 2244913 | 2245134 | - | NZ_CP007452.1 | Peptoclostridium acidaminophilum DSM 3953 |
| 286 | 2958651 | 2958884 | + | NZ_CP022987.1 | Pusillimonas thiosulfatoxidans |
| 287 | 3839506 | 3839736 | - | NZ_CP011025.1 | Pseudoalteromonas arctica A 37-1-2 |
| 288 | 1683340 | 1683570 | - | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 289 | 495113 | 495370 | - | NZ_CP040990.1 | Vibrio furnissii |
| 290 | 1608814 | 1609065 | + | NC_014925.1 | Staphylococcus pseudintermedius HKU10-03 |
| 291 | 3290840 | 3291097 | - | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 292 | 2444941 | 2445204 | + | NZ_CP007810.1 | Xanthomonas oryzae pv. oryzicola |
| 293 | 2610329 | 2610571 | + | NC_013791.2 | Alkalihalobacillus pseudofirmus OF4 |
| 294 | 1293655 | 1293867 | + | NZ_CP054140.1 | Desulfobulbus oligotrophicus |
| 295 | 4575317 | 4575553 | + | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 296 | 4750818 | 4751054 | + | NC_011725.1 | Bacillus cereus B4264 |
| 297 | 3397828 | 3398052 | - | NZ_CP011041.1 | Pseudoalteromonas tetraodonis |
| 298 | 1875765 | 1876001 | - | NZ_CP029797.1 | Paraliobacillus zengyii |
| 299 | 242260 | 242502 | + | NZ_LS974202.1 | Mesotoga infera |
| 300 | 5031352 | 5031600 | - | NZ_CP028897.1 | Dongshaea marina |
| 301 | 5849766 | 5849987 | - | NC_019693.1 | Oscillatoria acuminata PCC 6304 |
| 302 | 1023954 | 1024169 | - | NZ_CP011937.1 | Bacillus velezensis |
| 303 | 2927339 | 2927551 | - | NZ_CP060414.1 | Neisseria musculi |
| 304 | 797965 | 798219 | + | NZ_CP038029.1 | Sphingobacterium psychroaquaticum |
| 305 | 281994 | 282245 | - | NZ_CP015029.1 | Frederiksenia canicola |
| 306 | 3402347 | 3402622 | - | NZ_CP011030.1 | Pseudoalteromonas issachenkonii |
| 307 | 3053047 | 3053298 | + | NZ_LS483250.1 | Moritella yayanosii |
| 308 | 3965134 | 3965385 | - | NZ_CP044399.1 | Moritella marina ATCC 15381 |
| 309 | 385708 | 385926 | - | NZ_CP061799.1 | Desulfonema limicola |
| 310 | 1720331 | 1720585 | - | NZ_LR594049.1 | Streptococcus gordonii |
| 311 | 210993 | 211226 | + | NZ_CP053187.1 | Turicibacter sanguinis |
| 312 | 2926341 | 2926553 | - | NZ_CP015402.2 | Muribaculum intestinale |
| 313 | 1335688 | 1335900 | + | NC_008789.1 | Halorhodospira halophila SL1 |
| 314 | 849365 | 849598 | + | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 315 | 3519818 | 3520045 | + | NZ_CP024109.1 | Bacillus cytotoxicus |
| 316 | 1791878 | 1792123 | - | NZ_CP033732.1 | Staphylococcus hominis |
| 317 | 65794 | 66003 | + | NZ_LN877293.1 | Bacteroides fragilis |
| 318 | 2322694 | 2322915 | + | NZ_CP027234.1 | Bacteroides heparinolyticus |
| 319 | 3424543 | 3424776 | + | NC_015276.1 | Marinomonas mediterranea MMB-1 |
| 320 | 784964 | 785206 | + | NZ_LS483306.1 | Enterococcus cecorum |
| 321 | 2968034 | 2968255 | - | NZ_CP032869.1 | Mucilaginibacter celer |
| 322 | 55946 | 56170 | - | NZ_CP032090.1 | Pseudoalteromonas donghaensis |
| 323 | 29026 | 29283 | - | NC_014012.1 | Shewanella violacea DSS12 |
| 324 | 2770736 | 2770966 | + | NC_014033.1 | Prevotella ruminicola 23 |
| 325 | 2753601 | 2753822 | - | NZ_CP009228.1 | Treponema putidum |
| 326 | 2425676 | 2425897 | - | NC_002967.9 | Treponema denticola ATCC 35405 |
| 327 | 3110409 | 3110642 | - | NZ_AP018725.1 | Sulfuriflexus mobilis |
| 328 | 5185 | 5406 | + | NC_015500.1 | Treponema brennaborense DSM 12168 |
| 329 | 4070803 | 4071015 | - | NZ_CP031416.1 | Gallaecimonas mangrovi |
| 330 | 6088130 | 6088375 | - | NZ_AP022642.1 | Pseudomonas otitidis |
| 331 | 2239154 | 2239417 | - | NZ_CP058243.1 | Xanthomonas campestris pv. raphani |
| 332 | 709769 | 710011 | + | NC_014011.1 | Aminobacterium colombiense DSM 12261 |
| 333 | 4603849 | 4604085 | + | NZ_CP064875.1 | Bacillus toyonensis |
| 334 | 1614378 | 1614623 | - | NZ_CP048877.1 | Thermosulfuriphilus ammonigenes |
| 335 | 3122243 | 3122452 | - | NC_009922.1 | Alkaliphilus oremlandii OhILAs |
| 336 | 2130928 | 2131161 | + | NZ_CP040602.1 | Thiomicrorhabdus sediminis |
| 337 | 1399590 | 1399820 | + | NZ_CP045927.1 | Staphylococcus agnetis |
| 338 | 2114347 | 2114568 | - | NZ_LR134375.1 | Veillonella dispar |
| 339 | 1044934 | 1045167 | - | NZ_CP017560.1 | Sporosarcina ureilytica |
| 340 | 2095411 | 2095632 | - | NZ_AP022321.1 | Veillonella nakazawae |
| 341 | 838299 | 838538 | + | NZ_AP018202.1 | Thermostichus vulcanus NIES-2134 |
| 342 | 484839 | 485135 | + | NZ_CP015425.1 | [Haemophilus] ducreyi |
| 343 | 4659715 | 4659930 | - | NC_014376.1 | [Clostridium] saccharolyticum WM1 |
| 344 | 6182343 | 6182588 | - | NZ_AP014862.1 | Pseudomonas furukawaii |
| 345 | 1398301 | 1398537 | + | NZ_LT906464.1 | Staphylococcus muscae |
| 346 | 1608472 | 1608732 | + | NZ_CP053564.1 | Pseudonocardia broussonetiae |
| 347 | 4633538 | 4633750 | + | NZ_CP024035.1 | Priestia aryabhattai |
| 348 | 1450420 | 1450662 | - | NZ_CP032621.1 | Streptococcus gwangjuense |
| 349 | 5079 | 5300 | + | NZ_CP054142.1 | Treponema parvum |
| 350 | 394223 | 394429 | + | NC_005042.1 | Prochlorococcus marinus subsp. marinus str. CCMP1375 |
| 351 | 285190 | 285408 | - | NZ_CP029176.1 | Acidibrevibacterium fodinaquatile |
| 352 | 153754 | 154026 | - | NC_019776.1 | Cyanobacterium aponinum PCC 10605 |
| 353 | 6055630 | 6055875 | - | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 354 | 1081611 | 1081835 | - | NZ_LR134506.1 | Porphyromonas cangingivalis |
| 355 | 845283 | 845525 | - | NC_017934.1 | Mesotoga prima MesG1.Ag.4.2 |
| 356 | 1991258 | 1991464 | + | NC_015713.1 | Simkania negevensis Z |
| 357 | 2868097 | 2868318 | - | NZ_CP060820.1 | Lysobacter solisilvae (ex Woo and Kim 2020) |
| 358 | 1058895 | 1059104 | - | NC_011959.1 | Thermomicrobium roseum DSM 5159 |
| 359 | 2687905 | 2688150 | - | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 360 | 20736 | 20984 | - | NZ_LR134435.1 | Legionella adelaidensis |
| 361 | 2142791 | 2143018 | - | NC_012778.1 | [Eubacterium] eligens ATCC 27750 |
| 362 | 2239161 | 2239394 | + | NZ_CP027770.1 | Staphylococcus felis |
| 363 | 562104 | 562343 | + | NC_004113.1 | Thermosynechococcus vestitus BP-1 |
| 364 | 35597 | 35854 | - | NZ_CP014782.1 | Shewanella psychrophila |
| 365 | 340918 | 341196 | + | NZ_CP065061.1 | Streptococcus equi subsp. zooepidemicus |
| 366 | 4787867 | 4788103 | + | NZ_CP032365.1 | Bacillus wiedmannii |
| 367 | 319909 | 320142 | - | NZ_CP038012.1 | Sporosarcina pasteurii |
| 368 | 640497 | 640736 | - | NZ_CP012294.1 | Pediococcus damnosus |
| 369 | 2039348 | 2039569 | - | NZ_LT906470.1 | Veillonella rodentium |
| 370 | 6094175 | 6094423 | - | NZ_CP047698.1 | Pseudomonas knackmussii |
| 371 | 1637934 | 1638170 | + | NZ_CP023049.2 | Chryseobacterium piperi |
| 372 | 803509 | 803721 | + | NZ_CP045875.1 | Heliorestis convoluta |
| 373 | 3791021 | 3791269 | + | NZ_CP011129.1 | Lysobacter antibioticus |
| 374 | 2128522 | 2128731 | - | NC_013385.1 | Ammonifex degensii KC4 |
| 375 | 1457328 | 1457537 | - | NZ_LR594050.1 | Streptococcus porcinus |
| 376 | 79981 | 80193 | - | NZ_CP016953.1 | Streptococcus himalayensis |
| 377 | 505450 | 505680 | + | NZ_CP060711.1 | Thermomonas brevis |
| 378 | 2669962 | 2670171 | + | NZ_CP031188.1 | Flavobacterium arcticum |
| 379 | 1898100 | 1898354 | - | NC_015499.1 | Thermodesulfobium narugense DSM 14796 |
| 380 | 1276783 | 1276989 | - | NZ_CP019981.1 | Pediococcus inopinatus |
| 381 | 3405699 | 3405923 | - | NC_015172.1 | Syntrophobotulus glycolicus DSM 8271 |
| 382 | 820616 | 820858 | + | NZ_CP018180.1 | Liquorilactobacillus nagelii |
| 383 | 1090304 | 1090543 | - | NZ_CP064056.1 | Staphylococcus lloydii |
| 384 | 1772577 | 1772831 | - | NZ_CP012900.1 | Stenotrophomonas acidaminiphila |
| 385 | 1881829 | 1882065 | + | NZ_LR134304.1 | Staphylococcus schweitzeri |
| 386 | 1823033 | 1823269 | + | NC_007795.1 | Staphylococcus aureus subsp. aureus NCTC 8325 |
| 387 | 3806781 | 3807032 | + | NZ_CP042831.1 | Flavobacterium alkalisoli |
| 388 | 3408344 | 3408571 | - | NZ_CP013742.1 | Legionella pneumophila |
| 389 | 1264530 | 1264742 | + | NC_013132.1 | Chitinophaga pinensis DSM 2588 |
| 390 | 1803999 | 1804250 | + | NZ_LT906460.1 | Staphylococcus simiae |
| 391 | 3894779 | 3894988 | - | NC_011837.1 | Clostridium kluyveri NBRC 12016 |
| 392 | 1028217 | 1028435 | - | NZ_LR134242.1 | Staphylococcus warneri |
| 393 | 401402 | 401620 | + | NC_022737.1 | Staphylococcus pasteuri SP1 |
| 394 | 1069595 | 1069843 | - | NZ_CP035288.1 | Staphylococcus epidermidis |
| 395 | 2002610 | 2002846 | - | NZ_LN849456.1 | Devriesea agamarum |
| 396 | 492059 | 492271 | + | NZ_AP019755.1 | Nitrosomonas stercoris |
| 397 | 2593387 | 2593674 | - | NZ_CP009248.1 | Corynebacterium sphenisci DSM 44792 |
| 398 | 436951 | 437202 | + | NZ_LR594046.1 | Streptococcus dysgalactiae |
| 399 | 2913 | 3122 | + | NZ_CP039126.1 | Blautia producta |
| 400 | 143345 | 143578 | - | NZ_LR134293.1 | Streptococcus canis |
| 401 | 1186687 | 1186935 | + | NC_012881.1 | Maridesulfovibrio salexigens DSM 2638 |
| 402 | 1056509 | 1056742 | + | NZ_CP013910.1 | Deinococcus actinosclerus |
| 403 | 2648639 | 2648860 | - | NC_019978.1 | Halobacteroides halobius DSM 5150 |
| 404 | 2866218 | 2866451 | + | NZ_CP011389.1 | Deinococcus soli (ex Cha et al. 2016) |
| 405 | 1859192 | 1859410 | + | NZ_CP033460.1 | Staphylococcus debuckii |
| 406 | 308693 | 308953 | + | NZ_CP010450.1 | Streptococcus pyogenes |
| 407 | 4738883 | 4739140 | - | NZ_CP003915.1 | Advenella mimigardefordensis DPN7 |
| 408 | 584541 | 584783 | + | NC_015682.1 | Thermodesulfobacterium geofontis OPF15 |
| 409 | 1237720 | 1237947 | - | NZ_CP018776.1 | Staphylococcus condimenti |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP006569.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF12631.9 | 0.66 | 269 | 1753.0 | same-strand | MnmE helical domain |
| 2 | PF10396.11 | 0.66 | 269 | 1753.0 | same-strand | GTP-binding protein TrmE N-terminus |
| 3 | PF14849.8 | 0.65 | 266 | 3 | same-strand | YidC periplasmic domain |
| 4 | PF02096.22 | 0.76 | 311 | 3.0 | same-strand | 60Kd inner membrane protein |
| 5 | PF00825.20 | 0.66 | 269 | -36.0 | same-strand | Ribonuclease P |
++ More..