* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_008095.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF09559.12
|
0.67
|
2
|
179.5
|
same-strand
|
Cas6 Crispr
|
2
|
PF18145.3
|
0.67
|
2
|
134.5
|
same-strand
|
SMODS-associated and fused to various effectors sensor domain
|
3
|
PF09544.12
|
0.67
|
2
|
1929.0
|
opposite-strand
|
Protein of unknown function (DUF2381)
|
4
|
PF01594.18
|
0.67
|
2
|
4754.0
|
same-strand
|
AI-2E family transporter
|
++ More..