Result : Q1AXT1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (Asp/Glu-ADT subunit C) (EC 6.3.5.-) |
| NCBI Accession ID | CP000386.1 |
| Organism | Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) |
| Left | 864987 |
| Right | 865268 |
| Strand | + |
| Nucleotide Sequence | ATGATATCCGAGGAGCAGGTGCGTCACGTGGCGGAGCTCGCCCGGCTGGGGCTCACGGACGAGGAGGTGGCCCGCATGGGCGGCCAGCTGGGGGCGATCCTGGACAGCATCGAGAAGATCCGGGAGCTGGACCTGGAGGGCGTGCCGCCCACCGCGAACCCCCTCAACCTGACGAACGTCTTCCGCCCCGACGAGCCGCGCGAGAGCCTCCGGCGCGAGGAGGCGCTGGCGGTGGCCCCGGAGACGGCGGACGGCATGTTCGCCGTGCCGAGGATCGACTGA |
| Sequence | MISEEQVRHVAELARLGLTDEEVARMGGQLGAILDSIEKIRELDLEGVPPTANPLNLTNVFRPDEPRESLRREEALAVAPETADGMFAVPRID |
| Source of smORF | Swiss-Prot |
| Function | Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln). {ECO:0000255|HAMAP-Rule:MF_00122}. |
| Pubmed ID | |
| Domain | CDD:412411 |
| Functional Category | Others |
| Uniprot ID | Q1AXT1 |
| ORF Length (Amino Acid) | 93 |
++ More..
| Conservation Analysis |
No. of Species: 148
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 864987 | 865268 | + | NC_008148.1 | Rubrobacter xylanophilus DSM 9941 |
| 2 | 760079 | 760360 | + | NZ_CP007514.1 | Rubrobacter radiotolerans |
| 3 | 2041442 | 2041723 | - | NZ_CP031115.1 | Rubrobacter indicoceani |
| 4 | 571234 | 571524 | + | NZ_CP041666.1 | Radiobacillus deserti |
| 5 | 5353557 | 5353856 | - | NZ_AP022598.1 | Mycolicibacterium parafortuitum |
| 6 | 4657684 | 4657983 | - | NZ_AP022574.1 | Mycolicibacterium psychrotolerans |
| 7 | 4409203 | 4409469 | - | NZ_AP022560.1 | Mycolicibacterium moriokaense |
| 8 | 2134964 | 2135221 | - | NZ_CP011361.2 | Salimicrobium jeotgali |
| 9 | 410917 | 411192 | - | NZ_AP022599.1 | Mycolicibacterium pulveris |
| 10 | 549895 | 550143 | + | NZ_CP017962.1 | Virgibacillus halodenitrificans |
| 11 | 1933829 | 1934086 | - | NZ_AP022587.1 | Mycobacterium stomatepiae |
| 12 | 3153158 | 3153394 | - | NZ_CP048103.1 | Kroppenstedtia eburnea |
| 13 | 2633582 | 2633872 | + | NC_011831.1 | Chloroflexus aggregans DSM 9485 |
| 14 | 1482044 | 1482331 | - | NZ_CP012117.1 | Dermabacter vaginalis |
| 15 | 1640928 | 1641170 | + | NZ_LT906483.1 | Mycolicibacterium thermoresistibile |
| 16 | 364352 | 364618 | + | NZ_AP012331.1 | Bifidobacterium scardovii JCM 12489 = DSM 13734 |
| 17 | 1895410 | 1895694 | + | NZ_CP019633.1 | Sedimentisphaera cyanobacteriorum |
| 18 | 2507880 | 2508188 | + | NZ_CP019791.1 | Anaerohalosphaera lusitana |
| 19 | 2558324 | 2558623 | + | NZ_AP022570.1 | Mycolicibacterium poriferae |
| 20 | 918181 | 918480 | - | NZ_AP022568.1 | Mycobacterium simiae |
| 21 | 2065340 | 2065639 | + | NZ_LR134356.1 | Mycolicibacterium aurum |
| 22 | 816017 | 816283 | + | NC_004193.1 | Oceanobacillus iheyensis HTE831 |
| 23 | 1611448 | 1611723 | + | NZ_AP018164.1 | Mycobacterium shigaense |
| 24 | 5393792 | 5394091 | - | NZ_AP022579.1 | Mycolicibacterium boenickei |
| 25 | 610194 | 610451 | + | NZ_CP029797.1 | Paraliobacillus zengyii |
| 26 | 2255918 | 2256217 | + | NC_008726.1 | Mycolicibacterium vanbaalenii PYR-1 |
| 27 | 4703 | 4966 | + | NZ_CP011786.1 | Bifidobacterium actinocoloniiforme DSM 22766 |
| 28 | 1378594 | 1378836 | + | NZ_CP011883.2 | Mycobacterium haemophilum DSM 44634 |
| 29 | 976859 | 977125 | + | NZ_LR026975.1 | Mycolicibacterium hassiacum DSM 44199 |
| 30 | 540956 | 541198 | - | NZ_AP022615.1 | Mycobacterium heidelbergense |
| 31 | 2030631 | 2030930 | + | NZ_AP022618.1 | Mycolicibacterium insubricum |
| 32 | 3492648 | 3492890 | - | NZ_AP024310.1 | Mycobacterium heckeshornense |
| 33 | 2509853 | 2510095 | + | NC_013947.1 | Stackebrandtia nassauensis DSM 44728 |
| 34 | 5610087 | 5610329 | + | NZ_AP022573.1 | Mycobacterium saskatchewanense |
| 35 | 2525273 | 2525572 | - | NZ_AP022563.1 | Mycolicibacterium duvalii |
| 36 | 5252750 | 5252992 | + | NZ_AP022569.1 | Mycobacterium cookii |
| 37 | 2182815 | 2183099 | - | NZ_CP021023.1 | Sedimentisphaera salicampi |
| 38 | 1285050 | 1285325 | + | NZ_AP022605.1 | Mycobacterium doricum |
| 39 | 956238 | 956477 | + | NZ_CP020028.1 | Paenibacillus kribbensis |
| 40 | 657806 | 658066 | + | NC_014377.1 | Thermosediminibacter oceani DSM 16646 |
| 41 | 986358 | 986648 | - | NZ_AP013035.1 | Thermosulfidibacter takaii ABI70S6 |
| 42 | 514473 | 514712 | - | NC_016641.1 | Paenibacillus terrae HPL-003 |
| 43 | 2174313 | 2174567 | - | NZ_CP036281.1 | Polystyrenella longa |
| 44 | 3816540 | 3816830 | - | NC_013739.1 | Conexibacter woesei DSM 14684 |
| 45 | 3480783 | 3481031 | + | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 46 | 2519689 | 2519964 | - | NZ_AP022586.1 | Mycolicibacterium litorale |
| 47 | 2118982 | 2119224 | + | NZ_CP025546.1 | Mycobacterium paragordonae |
| 48 | 1296414 | 1296653 | - | NZ_CP045298.1 | Paenibacillus brasilensis |
| 49 | 310594 | 310833 | + | NC_022524.1 | Bacillus infantis NRRL B-14911 |
| 50 | 1627553 | 1627852 | - | NZ_AP022565.1 | Mycolicibacterium alvei |
| 51 | 1328990 | 1329247 | - | NZ_CP014989.1 | Serinicoccus hydrothermalis |
| 52 | 4339808 | 4340104 | - | NZ_CP015163.1 | Amycolatopsis albispora |
| 53 | 2367216 | 2367515 | + | NZ_CP011269.1 | Mycolicibacterium fortuitum |
| 54 | 4847994 | 4848293 | - | NZ_CP020809.1 | Mycobacterium dioxanotrophicus |
| 55 | 3159413 | 3159655 | - | NZ_AP022581.1 | Mycobacterium lacus |
| 56 | 1857591 | 1857833 | - | NZ_AP022576.1 | Mycobacterium florentinum |
| 57 | 3918019 | 3918261 | - | NC_016946.1 | Mycobacterium intracellulare ATCC 13950 |
| 58 | 4035545 | 4035787 | - | NC_016948.1 | Mycobacterium paraintracellulare |
| 59 | 455947 | 456213 | + | NZ_CP010311.1 | Geoalkalibacter subterraneus |
| 60 | 308489 | 308728 | + | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 61 | 916967 | 917209 | - | NC_009664.2 | Kineococcus radiotolerans SRS30216 = ATCC BAA-149 |
| 62 | 253262 | 253510 | + | NZ_CP012152.1 | Anoxybacillus gonensis |
| 63 | 1024580 | 1024864 | + | NC_009437.1 | Caldicellulosiruptor saccharolyticus DSM 8903 |
| 64 | 5457640 | 5457888 | + | NZ_AP022567.1 | Mycolicibacterium mageritense |
| 65 | 3047483 | 3047740 | - | NC_019897.1 | Thermobacillus composti KWC4 |
| 66 | 3531922 | 3532179 | + | NZ_AP022562.1 | Mycobacterium novum |
| 67 | 2916852 | 2917109 | - | NC_015576.1 | Mycolicibacter sinensis |
| 68 | 2996580 | 2996819 | + | NZ_CP061470.1 | Geobacillus zalihae |
| 69 | 699842 | 700126 | + | NC_014657.1 | Caldicellulosiruptor owensensis OL |
| 70 | 999423 | 999662 | + | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 71 | 5164140 | 5164415 | + | NC_022663.1 | Mycobacterium kansasii ATCC 12478 |
| 72 | 4283491 | 4283736 | - | NC_008554.1 | Syntrophobacter fumaroxidans MPOB |
| 73 | 3677262 | 3677501 | - | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 74 | 2736745 | 2736984 | + | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 75 | 5992959 | 5993216 | - | NZ_CP021780.1 | Paenibacillus donghaensis |
| 76 | 182894 | 183133 | + | NZ_CP017703.1 | Aeribacillus pallidus |
| 77 | 4023657 | 4023932 | + | NZ_AP022600.1 | Mycolicibacterium tokaiense |
| 78 | 5652832 | 5653131 | - | NZ_CP036275.1 | Maioricimonas rarisocia |
| 79 | 1404566 | 1404826 | - | NC_017079.1 | Caldilinea aerophila DSM 14535 = NBRC 104270 |
| 80 | 919751 | 920008 | - | NZ_CP048429.1 | Paenibacillus jilunlii |
| 81 | 6212618 | 6212875 | - | NZ_CP009287.1 | Paenibacillus graminis |
| 82 | 923529 | 923786 | - | NZ_CP068595.1 | Paenibacillus sonchi |
| 83 | 6879669 | 6879926 | - | NZ_LN831776.1 | Paenibacillus riograndensis SBR5 |
| 84 | 703666 | 703923 | + | NZ_CP044427.1 | Ornithinimicrobium pratense |
| 85 | 698664 | 698921 | + | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 86 | 2862953 | 2863213 | - | NZ_CP024955.1 | Kyrpidia spormannii |
| 87 | 3802064 | 3802321 | + | NC_014972.1 | Desulfobulbus propionicus DSM 2032 |
| 88 | 825233 | 825490 | + | NZ_CP038213.1 | Ornithinimicrobium flavum |
| 89 | 3394716 | 3395015 | + | NZ_AP022588.1 | Mycolicibacterium sediminis |
| 90 | 2874281 | 2874541 | - | NC_014098.1 | Kyrpidia tusciae DSM 2912 |
| 91 | 3331154 | 3331450 | - | NZ_CP036250.1 | Egicoccus halophilus |
| 92 | 3258454 | 3258753 | + | NZ_CP043474.1 | Mycobacterium grossiae |
| 93 | 7039732 | 7040031 | - | NC_021252.1 | Amycolatopsis keratiniphila |
| 94 | 183522 | 183761 | - | NZ_CP070511.1 | Parageobacillus toebii |
| 95 | 3263202 | 3263444 | + | NZ_AP022583.1 | Mycobacterium noviomagense |
| 96 | 1156743 | 1157045 | + | NZ_CP045851.1 | Actinomarinicola tropica |
| 97 | 1872638 | 1872937 | + | NZ_CP016174.1 | Amycolatopsis orientalis |
| 98 | 3399658 | 3399945 | - | NZ_CP014167.1 | Paenibacillus yonginensis |
| 99 | 1635361 | 1635660 | + | NZ_CP008953.1 | Amycolatopsis japonica |
| 100 | 7138228 | 7138527 | + | NZ_CP011125.1 | Sandaracinus amylolyticus |
| 101 | 569354 | 569596 | + | NZ_CP039710.1 | Thermoactinomyces vulgaris |
| 102 | 5196213 | 5196506 | - | NC_009767.1 | Roseiflexus castenholzii DSM 13941 |
| 103 | 730754 | 730996 | + | NZ_AP022575.1 | Mycobacterium shinjukuense |
| 104 | 2933193 | 2933432 | - | NZ_CP014342.1 | Geobacillus subterraneus |
| 105 | 127542 | 127775 | - | NZ_CP043611.1 | Paenibacillus antarcticus |
| 106 | 2165195 | 2165440 | - | NZ_CP040098.1 | Desulfoglaeba alkanexedens ALDC |
| 107 | 5555505 | 5555804 | + | NZ_AP022577.1 | Mycolicibacterium aubagnense |
| 108 | 2301599 | 2301838 | - | NC_019978.1 | Halobacteroides halobius DSM 5150 |
| 109 | 2475024 | 2475281 | - | NC_010556.1 | Exiguobacterium sibiricum 255-15 |
| 110 | 1675772 | 1676047 | - | NZ_CP041217.1 | Saccharibacillus brassicae |
| 111 | 2170769 | 2171068 | + | NZ_CP062008.1 | Mycolicibacterium mucogenicum DSM 44124 |
| 112 | 2289028 | 2289303 | - | NZ_CP049934.1 | Leucobacter insecticola |
| 113 | 938240 | 938524 | + | NZ_CP021255.1 | Desulfobulbus oralis |
| 114 | 238779 | 239066 | + | NC_011899.1 | Halothermothrix orenii H 168 |
| 115 | 2858551 | 2858850 | - | NZ_LT906469.1 | Mycolicibacter terrae |
| 116 | 1762739 | 1763026 | - | NC_011959.1 | Thermomicrobium roseum DSM 5159 |
| 117 | 4199851 | 4200084 | + | NZ_CP016809.1 | Paenibacillus ihbetae |
| 118 | 389884 | 390126 | + | NZ_CP019699.1 | Novibacillus thermophilus |
| 119 | 4988188 | 4988430 | - | NZ_AP022606.1 | Mycobacterium branderi |
| 120 | 1748031 | 1748288 | + | NZ_CP022203.1 | Corallococcus macrosporus DSM 14697 |
| 121 | 441526 | 441801 | + | NZ_CP041091.1 | Nocardioides sambongensis |
| 122 | 2356729 | 2357025 | - | NC_015588.1 | Isoptericola variabilis 225 |
| 123 | 1722155 | 1722412 | + | NC_008095.1 | Myxococcus xanthus DK 1622 |
| 124 | 3281519 | 3281815 | + | NZ_CP042430.1 | Baekduia soli |
| 125 | 5076980 | 5077237 | - | NZ_CP009288.1 | Paenibacillus durus |
| 126 | 4582103 | 4582396 | + | NZ_CP017641.1 | Fuerstia marisgermanicae |
| 127 | 2507249 | 2507530 | + | NZ_CP022121.1 | Dehalobacterium formicoaceticum |
| 128 | 1883759 | 1884037 | - | NC_015948.1 | Haloarcula hispanica ATCC 33960 |
| 129 | 2132548 | 2132805 | - | NC_013523.1 | Sphaerobacter thermophilus DSM 20745 |
| 130 | 2305138 | 2305416 | - | NC_019962.1 | Natrinema pellirubrum DSM 15624 |
| 131 | 1831210 | 1831509 | - | NZ_AP022608.1 | Mycolicibacterium gadium |
| 132 | 2513983 | 2514282 | + | NZ_LN831039.1 | Mycolicibacterium smegmatis |
| 133 | 569472 | 569771 | + | NZ_AP022601.1 | Mycobacterium gallinarum |
| 134 | 234625 | 234855 | - | NC_019792.1 | Natronobacterium gregoryi SP2 |
| 135 | 2082280 | 2082579 | + | NZ_CP011491.1 | Mycolicibacterium vaccae 95051 |
| 136 | 3674869 | 3675141 | - | NZ_CP009360.4 | Mycobacterium avium subsp. hominissuis |
| 137 | 2153510 | 2153752 | - | NC_014378.1 | Acetohalobium arabaticum DSM 5501 |
| 138 | 3251048 | 3251314 | - | NZ_LR134355.1 | Mycolicibacterium chitae |
| 139 | 85611 | 85910 | + | NZ_AP022590.1 | Mycobacterium mantenii |
| 140 | 2103001 | 2103255 | - | NZ_CP017237.1 | Moorella thermoacetica |
| 141 | 3688302 | 3688532 | + | NC_013922.1 | Natrialba magadii ATCC 43099 |
| 142 | 5933416 | 5933715 | - | NZ_CP012150.1 | Mycobacterium goodii |
| 143 | 1483690 | 1483989 | + | NZ_AP022613.1 | Mycobacterium conspicuum |
| 144 | 5741813 | 5742055 | + | NZ_AP022619.1 | Mycobacterium paraseoulense |
| 145 | 378034 | 378309 | + | NZ_AP022582.1 | Mycobacterium seoulense |
| 146 | 418068 | 418325 | - | NZ_AP022589.1 | Mycolicibacter minnesotensis |
| 147 | 368293 | 368535 | + | NZ_AP022620.1 | Mycolicibacterium anyangense |
| 148 | 1697758 | 1698000 | + | NZ_LR130759.1 | Mycobacterium basiliense |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_008148.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01425.23 | 0.98 | 145 | 2 | same-strand | Amidase |
| 2 | PF02934.17 | 0.82 | 121 | 1563 | same-strand | GatB/GatE catalytic domain |
| 3 | PF02637.20 | 0.81 | 120 | 1564.5 | same-strand | GatB domain |
++ More..