ProsmORF-pred
Result : Q1AWG2
Protein Information
Information Type Description
Protein name 50S ribosomal protein L35
NCBI Accession ID CP000386.1
Organism Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1)
Left 1327191
Right 1327388
Strand +
Nucleotide Sequence ATGCCGAAGATGAAGACCCACAAGGGCGCCGCGGGGCGCTTCGAGGTCATGAAGCGCGGCAAGCTCAGGCGGCGGCGCGCCGGGCACAACCACATCCTGGAGAAGAAGACCAGCAAGCGCAAGCGGCGGCTCAACACCGAGACCTACGTCAACCCCGCCGACGAGAAGCGGGTGAGGCGTCTTCTGGGGGTGAGGTAG
Sequence MPKMKTHKGAAGRFEVMKRGKLRRRRAGHNHILEKKTSKRKRRLNTETYVNPADEKRVRRLLGVR
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl00392. Profile Description: Ribosomal protein L35. This ribosomal protein is found in bacteria and organelles only. It is not closely related to any eukaryotic or archaeal ribosomal protein. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Pubmed ID
Domain CDD:412354
Functional Category Ribosomal_protein
Uniprot ID Q1AWG2
ORF Length (Amino Acid) 65
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 467
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 1327191 1327388 + NC_008148.1 Rubrobacter xylanophilus DSM 9941
2 1347800 1347997 + NZ_CP007514.1 Rubrobacter radiotolerans
3 1289018 1289215 + NZ_CP031115.1 Rubrobacter indicoceani
4 2031513 2031707 - NZ_LR134501.1 Nocardiopsis dassonvillei
5 1522857 1523054 - NZ_CP009170.1 Thermoanaerobacter kivui
6 9084605 9084799 - NZ_CP012752.1 Kibdelosporangium phytohabitans
7 2088705 2088899 + NC_014666.1 Frankia inefficax
8 810951 811148 + NC_014964.1 Thermoanaerobacter brockii subsp. finnii Ako-1
9 1654253 1654450 - NC_015958.1 Thermoanaerobacter wiegelii Rt8.B1
10 1461076 1461270 - NZ_CP009249.1 Corynebacterium phocae
11 1617613 1617810 - NZ_CP029256.1 Christensenella minuta
12 2048489 2048683 - NZ_CP039292.1 Actinomyces procaprae
13 2385893 2386090 + NZ_CP059066.1 Koleobacter methoxysyntrophicus
14 3167593 3167787 - NZ_CP018099.1 Caldithrix abyssi DSM 13497
15 1582787 1582981 + NZ_CP015449.1 Dietzia lutea
16 1577520 1577714 + NZ_CP015453.1 Dietzia psychralcaliphila
17 1517243 1517440 - NC_014209.1 Thermoanaerobacter mathranii subsp. mathranii str. A3
18 1535537 1535734 - NC_013921.1 Thermoanaerobacter italicus Ab9
19 1197960 1198154 - NC_014655.1 Leadbetterella byssophila DSM 17132
20 2287355 2287552 + NC_020520.1 Ilumatobacter coccineus YM16-304
21 779590 779784 - NZ_AP017457.1 Aurantimicrobium minutum
22 1534682 1534876 - NZ_CP009251.1 Corynebacterium stationis
23 798694 798891 - NZ_CP017269.1 Geosporobacter ferrireducens
24 1415948 1416142 - NC_008578.1 Acidothermus cellulolyticus 11B
25 1799580 1799777 + NZ_CP045851.1 Actinomarinicola tropica
26 751693 751887 - NZ_CP034438.1 Flaviflexus salsibiostraticola
27 2831063 2831260 - NZ_CP022121.1 Dehalobacterium formicoaceticum
28 3384987 3385181 - NZ_AP023172.1 Rhodococcus qingshengii
29 1895967 1896161 - NC_010718.1 Natranaerobius thermophilus JW/NM-WN-LF
30 3854161 3854361 - NC_013739.1 Conexibacter woesei DSM 14684
31 4898967 4899161 - NZ_CP050063.1 Spirosoma aureum
32 644290 644487 + NC_015520.1 Mahella australiensis 50-1 BON
33 1517139 1517345 - NZ_CP060789.1 Tessaracoccus defluvii
34 2937188 2937382 - NZ_CP053435.1 Spirosoma taeanense
35 1598169 1598363 - NZ_LR698967.1 Corynebacterium ammoniagenes
36 5151698 5151892 - NZ_CP016076.1 Actinoalloteichus fjordicus
37 728029 728226 + NC_015519.1 Tepidanaerobacter acetatoxydans Re1
38 5869539 5869733 + NZ_CP061007.1 Saccharopolyspora spinosa
39 8892357 8892551 + NZ_CP031142.1 Saccharopolyspora pogona
40 354396 354599 - NC_016024.1 Chloracidobacterium thermophilum B
41 2011687 2011884 - NZ_CP012154.1 Wenzhouxiangella marina
42 1615160 1615357 + NZ_CP040924.1 Clostridium thermarum
43 968428 968586 - NZ_CP069485.1 Corynebacterium glucuronolyticum
44 276317 276511 + NZ_LS483468.1 Rhodococcus coprophilus
45 388519 388713 + NZ_CP028130.1 Rathayibacter iranicus
46 1738299 1738499 + NC_019780.1 Dactylococcopsis salina PCC 8305
47 701697 701903 - NC_013501.1 Rhodothermus marinus DSM 4252
48 6030718 6030912 - NZ_CP041695.1 Nocardia otitidiscaviarum
49 2016623 2016817 + NZ_LR134476.1 Trueperella bialowiezensis
50 417879 418073 + NZ_CP011005.1 Psychromicrobium lacuslunae
51 865286 865480 + NZ_CP020468.1 Actinomyces gaoshouyii
52 1722512 1722703 + NC_009633.1 Alkaliphilus metalliredigens QYMF
53 2398498 2398695 + NC_014393.1 Clostridium cellulovorans 743B
54 5904994 5905188 - NC_009142.1 Saccharopolyspora erythraea NRRL 2338
55 1594161 1594355 + NZ_CP015961.1 Dietzia timorensis
56 2241747 2241941 + NZ_CP022752.1 Actinopolyspora erythraea
57 2809944 2810138 - NZ_CP017146.1 Marisediminicola antarctica
58 559653 559847 - NZ_CP007519.1 Trueperella pyogenes
59 697622 697819 + NC_014033.1 Prevotella ruminicola 23
60 2657873 2658067 - NZ_CP027433.1 Gordonia iterans
61 1443368 1443562 + NZ_CP047180.1 Rathayibacter festucae
62 800578 800775 + NZ_CP016786.1 Clostridium isatidis
63 1437079 1437276 - NZ_CP016786.1 Clostridium isatidis
64 1206075 1206269 + NZ_CP047186.1 Rathayibacter tanaceti
65 1166261 1166455 + NZ_CP015515.1 Rathayibacter tritici
66 2069301 2069495 - NC_014624.2 Eubacterium callanderi
67 706220 706414 - NZ_CP029487.1 Eubacterium maltosivorans
68 3805964 3806158 - NZ_CP019962.1 Eubacterium limosum
69 1183286 1183480 + NZ_CP039247.1 Corynebacterium endometrii
70 2380823 2381017 + NC_011026.1 Chloroherpeton thalassium ATCC 35110
71 2542296 2542490 - NZ_LR134442.1 Propionibacterium australiense
72 1643463 1643651 - NC_003869.1 Caldanaerobacter subterraneus subsp. tengcongensis MB4
73 4067654 4067848 + NZ_CP060713.1 Nocardioides mesophilus
74 271907 272104 + NC_018020.1 Turneriella parva DSM 21527
75 5221717 5221911 - NZ_AP023396.1 Nocardia wallacei
76 723190 723384 + NZ_LR134357.1 Actinomyces israelii
77 2092942 2093136 + NC_006361.1 Nocardia farcinica IFM 10152
78 1212643 1212843 + NZ_CP070511.1 Parageobacillus toebii
79 3659251 3659451 - NZ_CP016622.1 Parageobacillus thermoglucosidasius
80 2963866 2964063 - NC_005125.1 Gloeobacter violaceus PCC 7421
81 1373663 1373857 + NC_016940.1 Saprospira grandis str. Lewin
82 5438297 5438491 - NZ_CP026746.1 Nocardia cyriacigeorgica
83 907228 907422 + NZ_CP066060.1 Actinomyces oris
84 347939 348133 - NZ_CP066049.1 Actinomyces naeslundii
85 1161594 1161788 - NZ_LR134477.1 Actinomyces viscosus
86 1727441 1727641 + NZ_CP042326.1 Euhalothece natronophila Z-M001
87 763520 763717 + NC_016148.1 Thermovirga lienii DSM 17291
88 371264 371458 - NC_012115.1 Nautilia profundicola AmH
89 2519482 2519676 - NC_015589.1 Desulfotomaculum ruminis DSM 2154
90 962513 962707 - NZ_CP066065.1 Schaalia meyeri
91 3948369 3948563 - NZ_CP059694.1 Gordonia rubripertincta
92 1916650 1916808 + NZ_LS483464.1 Corynebacterium renale
93 1755209 1755403 + NC_009253.1 Desulfotomaculum reducens MI-1
94 1480201 1480398 + NC_013204.1 Eggerthella lenta DSM 2243
95 3799414 3799608 - NZ_CP027114.1 Gordonia alkanivorans
96 597797 597991 - NZ_CP038267.1 Nocardioides euryhalodurans
97 3014113 3014310 - NZ_CP038033.1 Nitrosococcus wardiae
98 1036639 1036833 + NZ_CP066802.1 Actinomyces weissii
99 2295869 2296063 + NZ_AP017372.2 Halorhodospira halochloris
100 1282322 1282519 + NC_014614.1 Acetoanaerobium sticklandii
101 570973 571170 + NC_010001.1 Lachnoclostridium phytofermentans ISDg
102 2388455 2388652 - NC_008261.1 Clostridium perfringens ATCC 13124
103 1165396 1165590 + NZ_CP031423.1 Microbacterium lemovicicum
104 427739 427939 + NC_018018.1 Bernardetia litoralis DSM 6794
105 1350536 1350730 + NZ_CP006764.1 Corynebacterium doosanense CAU 212 = DSM 45436
106 791077 791271 - NZ_CP042429.1 Corynebacterium nuruki S6-4
107 456857 457054 + NZ_CP045798.1 Thermoanaerosceptrum fracticalcis
108 1071952 1072149 + NZ_CP047602.1 Thermoanaerobacterium aotearoense
109 1239364 1239522 + NZ_CP011545.1 Corynebacterium testudinoris
110 1815594 1815785 + NZ_CP009312.1 Lawsonella clevelandensis
111 161195 161389 - NZ_CP047156.1 Epidermidibacterium keratini
112 2311684 2311881 - NZ_HG917868.1 Clostridium bornimense
113 707561 707755 - NZ_LT635457.1 Actinomyces pacaensis
114 1552719 1552916 - NC_014220.1 Syntrophothermus lipocalidus DSM 12680
115 59859 60056 + NC_013223.1 Desulfohalobium retbaense DSM 5692
116 4262161 4262352 - NZ_CP022753.1 Nocardiopsis gilva YIM 90087
117 1486631 1486825 - NZ_CP053642.1 Actinomyces marmotae
118 1526749 1526943 - NZ_CP009248.1 Corynebacterium sphenisci DSM 44792
119 141417 141611 + NZ_CP014635.1 Corynebacterium simulans
120 1541084 1541278 + NZ_CP019698.1 Desulfotomaculum ferrireducens
121 563035 563229 - NZ_CP035806.1 Leucobacter triazinivorans
122 3616573 3616767 - NZ_CP022088.2 Nocardia brasiliensis
123 1140301 1140495 + NC_015673.1 Corynebacterium resistens DSM 45100
124 1158071 1158265 + NZ_CP035037.1 Leucobacter muris
125 3168790 3168987 + NZ_CP023671.1 Clostridium septicum
126 3604213 3604410 - NZ_AP017312.1 Aneurinibacillus soli
127 1687095 1687289 - NZ_LS483459.1 Corynebacterium jeikeium
128 3001907 3002101 - NZ_LT906450.1 Rhodococcus rhodochrous
129 2766354 2766548 - NC_013159.1 Saccharomonospora viridis DSM 43017
130 1187097 1187255 + NZ_CP007790.1 Corynebacterium marinum DSM 44953
131 1309094 1309288 + NZ_LT906467.1 Corynebacterium imitans
132 3313847 3314041 - NZ_CP022208.1 Rhodococcus pyridinivorans
133 1522152 1522349 + NZ_CP040463.1 Caminibacter mediatlanticus TB-2
134 1649362 1649559 - NZ_CP027286.1 Clostridium chauvoei
135 3044881 3045075 - NC_013441.1 Gordonia bronchialis DSM 43247
136 825181 825378 + NZ_CP034118.1 Staphylospora marina
137 2093088 2093282 - NZ_CP044231.1 Microbacterium caowuchunii
138 1180321 1180521 + NZ_CP018058.1 Geobacillus thermocatenulatus
139 2362608 2362811 - NC_016894.1 Acetobacterium woodii DSM 1030
140 2927688 2927885 + NZ_CP071376.1 Clostridium gasigenes
141 3049653 3049850 + NZ_CP071376.1 Clostridium gasigenes
142 53638 53838 - NZ_CP015439.1 Anoxybacillus amylolyticus
143 1461720 1461917 - NZ_AP023212.1 Hydrogenimonas urashimensis
144 2415878 2416072 + NZ_CP049253.1 Microbacterium amylolyticum
145 4580755 4580949 - NZ_CP016353.1 Prauserella marina
146 600742 600939 + NZ_CP019699.1 Novibacillus thermophilus
147 852237 852434 - NC_008340.1 Alkalilimnicola ehrlichii MLHE-1
148 550432 550632 + NZ_CP014342.1 Geobacillus subterraneus
149 655541 655738 + NC_007759.1 Syntrophus aciditrophicus SB
150 1992162 1992356 - NZ_CP006842.1 Corynebacterium glyciniphilum AJ 3170
151 2368537 2368731 + NZ_CP068161.1 Corynebacterium propinquum
152 1097758 1097955 + NC_015555.1 Thermoanaerobacterium xylanolyticum LX-11
153 2050548 2050742 - NC_022438.1 Leifsonia xyli subsp. cynodontis DSM 46306
154 34062 34256 + NZ_CP060716.1 Leucobacter denitrificans
155 762738 762938 - NZ_CP030032.1 Bradymonas sediminis
156 381375 381569 - NZ_CP027432.2 Caminibacter pacificus
157 497198 497392 + NC_008789.1 Halorhodospira halophila SL1
158 2611168 2611362 - NZ_LR134363.1 Actinomyces slackii
159 1492497 1492694 - NZ_CP021255.1 Desulfobulbus oralis
160 4253135 4253329 + NZ_CP015235.1 Rhodococcus fascians D188
161 1688880 1689077 + NZ_CP010311.1 Geoalkalibacter subterraneus
162 938682 938876 + NZ_CP046883.1 Corynebacterium anserum
163 3364156 3364350 - NZ_LR134356.1 Mycolicibacterium aurum
164 2366871 2367065 - NC_014165.1 Thermobispora bispora DSM 43833
165 1064635 1064832 + NZ_CP011402.1 Denitrobacterium detoxificans
166 1923989 1924186 - NZ_CP009302.1 Berryella intestinalis
167 2505729 2505923 + NC_013510.1 Thermomonospora curvata DSM 43183
168 2202190 2202387 + NZ_CP018082.1 Nocardia mangyaensis
169 1385487 1385684 - NC_016630.1 Filifactor alocis ATCC 35896
170 1837937 1838131 + NC_015635.1 Microlunatus phosphovorus NM-1
171 1610228 1610425 + NZ_CP014176.1 Clostridium argentinense
172 1366525 1366719 + NC_021915.1 Corynebacterium maris DSM 45190
173 200396 200593 - NZ_LT821227.1 Phoenicibacter congonensis
174 428078 428272 + NZ_CP032788.1 Corynebacterium xerosis
175 3135918 3136112 - NZ_CP045929.1 Saccharopolyspora coralli
176 635823 636029 + NZ_CP019606.1 Tessaracoccus aquimaris
177 2737777 2737977 - NC_006510.1 Geobacillus kaustophilus HTA426
178 1956196 1956396 - NZ_CP061470.1 Geobacillus zalihae
179 3185163 3185363 + NZ_CP061472.1 Geobacillus thermoleovorans
180 1681550 1681744 + NZ_CP048813.1 Rhodococcus triatomae
181 1478895 1479053 + NC_020302.1 Corynebacterium halotolerans YIM 70093 = DSM 44683
182 2007770 2007964 - NZ_CP038157.1 Corynebacterium sanguinis
183 1325688 1325882 - NZ_CP026947.1 Corynebacterium yudongzhengii
184 507637 507831 - NZ_CP009922.3 Streptomyces xiamenensis
185 735954 736148 - NZ_CP054938.1 Streptomyces harbinensis
186 1668787 1668984 + NC_007498.2 Syntrophotalea carbinolica DSM 2380
187 1766833 1767033 - NZ_CP017237.1 Moorella thermoacetica
188 3793895 3794092 - NZ_CP015756.1 Clostridium estertheticum subsp. estertheticum
189 1845152 1845346 - NZ_CP031356.1 Brachybacterium saurashtrense
190 2971968 2972162 - NC_016906.1 Gordonia polyisoprenivorans VH2
191 2234291 2234485 - NZ_AP023049.1 Alistipes indistinctus
192 1883562 1883759 + NZ_CP045504.1 Desulfovibrio sulfodismutans DSM 3696
193 5722138 5722332 - NZ_CP016174.1 Amycolatopsis orientalis
194 1560167 1560361 + NC_015564.1 Hoyosella subflava DQS3-9A1
195 1613225 1613419 + NZ_CP011542.1 Corynebacterium mustelae
196 4550177 4550371 - NZ_CP022521.1 Actinoalloteichus hoggarensis
197 2201135 2201335 - NZ_CP012152.1 Anoxybacillus gonensis
198 5642374 5642568 - NC_021252.1 Amycolatopsis keratiniphila
199 964794 964991 + NC_008593.1 Clostridium novyi NT
200 1587444 1587641 - NZ_CP059560.1 Aromatoleum petrolei
201 5552025 5552222 + NC_019695.1 Chroococcidiopsis thermalis PCC 7203
202 2936339 2936533 + NZ_CP008953.1 Amycolatopsis japonica
203 2573233 2573442 - NZ_AP017378.1 Desulfovibrio ferrophilus
204 189236 189433 + NC_018017.1 Desulfitobacterium dehalogenans ATCC 51507
205 1272365 1272559 - NC_002971.4 Coxiella burnetii RSA 493
206 1801048 1801245 - NC_014410.1 Thermoanaerobacterium thermosaccharolyticum DSM 571
207 1057089 1057283 + NZ_CP011546.1 Corynebacterium uterequi
208 1922471 1922665 + NZ_CP029642.1 Arthrobacter dokdonellae
209 1477506 1477703 - NC_012881.1 Maridesulfovibrio salexigens DSM 2638
210 1287840 1288037 + NZ_CP028339.1 Thauera aromatica K172
211 1467285 1467482 - NC_014216.1 Desulfurivibrio alkaliphilus AHT 2
212 2233088 2233285 + NZ_CP018839.1 Thauera chlorobenzoica
213 1353798 1353995 + NZ_CP030775.1 Clostridium butyricum
214 1103583 1103777 + NZ_CP009215.1 Corynebacterium ureicelerivorans
215 1441163 1441357 - NC_015437.1 Selenomonas sputigena ATCC 35185
216 1773115 1773312 - NZ_CP014204.2 Clostridium baratii
217 2470351 2470548 + NZ_CP054140.1 Desulfobulbus oligotrophicus
218 508784 508981 - NC_006513.1 Aromatoleum aromaticum EbN1
219 3126420 3126617 + NZ_CP059467.1 Aromatoleum bremense
220 3987755 3987949 + NZ_AP022598.1 Mycolicibacterium parafortuitum
221 1239876 1240070 + NZ_CP009246.1 Corynebacterium flavescens
222 1858552 1858746 - NZ_CP043661.1 Kribbella qitaiheensis
223 641677 641871 - NZ_LT906481.1 Corynebacterium urealyticum
224 1717279 1717470 + NC_021184.1 Desulfoscipio gibsoniae DSM 7213
225 434268 434462 + NZ_CP033972.1 Gordonia insulae
226 1770532 1770726 + NZ_CP023563.1 Brachybacterium vulturis
227 2871094 2871291 + NC_020291.1 Clostridium saccharoperbutylacetonicum N1-4(HMT)
228 993103 993303 + NZ_LT906464.1 Staphylococcus muscae
229 1624426 1624623 + NC_014972.1 Desulfobulbus propionicus DSM 2032
230 740093 740287 - NZ_CP022316.1 Brachybacterium avium
231 235888 236085 + NC_011830.1 Desulfitobacterium hafniense DCB-2
232 1082806 1083000 + NZ_CP026948.1 Corynebacterium liangguodongii
233 1345457 1345615 + NZ_CP009245.1 Corynebacterium aquilae DSM 44791
234 1905566 1905760 - NZ_AP022601.1 Mycobacterium gallinarum
235 3290268 3290465 - NC_013960.1 Nitrosococcus halophilus Nc 4
236 3065807 3066004 - NC_022571.1 Clostridium saccharobutylicum DSM 13864
237 3117042 3117236 - NZ_CP015163.1 Amycolatopsis albispora
238 368193 368393 + NZ_CP046996.1 Dehalobacter restrictus
239 1095834 1096028 - NZ_CP032317.1 Hymenobacter oligotrophus
240 1012188 1012382 + NC_017301.2 Corynebacterium pseudotuberculosis C231
241 118193 118387 + NZ_LT906443.1 Corynebacterium ulcerans
242 2118852 2119052 - NZ_CP027770.1 Staphylococcus felis
243 2465943 2466137 - NC_013172.1 Brachybacterium faecium DSM 4810
244 4508023 4508223 - NZ_CP024035.1 Priestia aryabhattai
245 4098634 4098828 + NZ_AP022579.1 Mycolicibacterium boenickei
246 3124805 3125005 - NZ_CP039543.1 Desulfovibrio marinus
247 1057620 1057820 + NZ_CP016020.1 Bacillus weihaiensis
248 1921318 1921515 - NZ_LT906477.1 Clostridium cochlearium
249 1512328 1512522 - NC_012590.1 Corynebacterium aurimucosum ATCC 700975
250 10114624 10114821 - NC_010162.1 Sorangium cellulosum So ce56
251 1338215 1338373 + NZ_CP033896.1 Corynebacterium choanae
252 2098968 2099162 - NC_009922.1 Alkaliphilus oremlandii OhILAs
253 175941 176138 + NC_019903.1 Desulfitobacterium dichloroeliminans LMG P-21439
254 3200311 3200505 + NZ_AP022560.1 Mycolicibacterium moriokaense
255 2110139 2110336 - NZ_CP010802.1 Desulfuromonas soudanensis
256 266479 266676 + NC_015172.1 Syntrophobotulus glycolicus DSM 8271
257 3776360 3776557 + NZ_CP029186.1 Flavobacterium album
258 542751 542948 + NZ_CP045508.1 Desulfolutivibrio sulfoxidireducens
259 1208953 1209147 + NZ_CP019688.1 Corynebacterium glaucum
260 2924508 2924702 + NZ_LN849456.1 Devriesea agamarum
261 2175715 2175909 + NZ_LR134355.1 Mycolicibacterium chitae
262 9952 10146 - NZ_AP022847.1 Nitrosophilus alvini
263 3629665 3629865 - NZ_CP042593.1 Bacillus dafuensis
264 3138667 3138867 + NZ_CP041305.1 Cytobacillus ciccensis
265 585071 585265 - NZ_CP008802.1 Actinotignum schaalii
266 1250802 1250999 + NC_007484.1 Nitrosococcus oceani ATCC 19707
267 9464718 9464915 + NZ_CP016211.1 Minicystis rosea
268 1256634 1256804 - NZ_CP008944.1 Corynebacterium atypicum
269 1240062 1240256 + NZ_LS483460.1 Corynebacterium minutissimum
270 1563063 1563257 - NZ_CP010827.1 Corynebacterium singulare
271 119835 120032 + NC_018515.1 Desulfosporosinus meridiei DSM 13257
272 1180812 1181006 + NC_021663.1 Corynebacterium terpenotabidum Y-11
273 1001648 1001842 + NZ_CP011312.1 Corynebacterium kutscheri
274 858361 858555 + NZ_CP028129.1 Rathayibacter rathayi
275 3586022 3586216 - NZ_CP011269.1 Mycolicibacterium fortuitum
276 537142 537339 + NZ_CP015519.1 Syntrophotalea acetylenivorans
277 4275882 4276082 + NZ_CP036402.1 Egibacter rhizosphaerae
278 858941 859135 + NC_022198.1 Corynebacterium argentoratense DSM 44202
279 3530107 3530301 + NZ_CP038436.1 Nocardioides seonyuensis
280 1196506 1196703 - NC_016803.1 Pseudodesulfovibrio mercurii
281 1738549 1738743 - NZ_AP022575.1 Mycobacterium shinjukuense
282 3079414 3079608 - NZ_AP022618.1 Mycolicibacterium insubricum
283 555619 555816 + NZ_CP060822.1 Cylindrospermopsis curvispora GIHE-G1
284 3624462 3624656 + NZ_AP022572.1 Mycobacterium shottsii
285 2693547 2693741 + NZ_AP018410.1 Mycobacterium pseudoshottsii JCM 15466
286 4295675 4295869 + NZ_CP058277.1 Mycobacterium marinum
287 737208 737402 - NZ_CP068168.1 Corynebacterium amycolatum
288 1279362 1279556 + NZ_CP023564.1 Brachybacterium ginsengisoli
289 3177329 3177526 + NZ_LR134352.1 Nocardia asteroides
290 2996345 2996539 + NZ_AP017900.1 Nocardia seriolae
291 985772 985969 + NZ_CP029331.1 Thauera hydrothermalis
292 964851 965045 + NC_018664.1 Gottschalkia acidurici 9a
293 1419628 1419786 - NZ_CP009247.1 Corynebacterium frankenforstense DSM 45800
294 1066296 1066490 + NZ_CP033897.1 Corynebacterium gerontici
295 10160203 10160400 - NZ_CP012159.1 Chondromyces crocatus
296 859193 859390 + NZ_CP014170.1 Clostridium tyrobutyricum
297 537898 538104 - NZ_LR214441.1 Tessaracoccus lapidicaptus
298 419701 419898 + NC_008576.1 Magnetococcus marinus MC-1
299 1118335 1118529 + NZ_LR738855.1 Corynebacterium rouxii
300 1134238 1134432 + NZ_LN831026.1 Corynebacterium diphtheriae
301 5877771 5877965 - NZ_AP022596.1 Mycolicibacterium helvum
302 1742616 1742810 - NZ_AP022620.1 Mycolicibacterium anyangense
303 3242003 3242197 - NZ_CP019870.1 Clostridioides difficile
304 194765 194962 + NZ_CP014646.1 Thauera humireducens
305 808004 808198 + NZ_CP044344.1 Nocardioides cynanchi
306 1900033 1900227 + NZ_LT906469.1 Mycolicibacter terrae
307 1796855 1797052 + NZ_CP043998.1 Clostridium diolis
308 769161 769355 - NZ_AP022593.1 Mycolicibacterium arabiense
309 1048391 1048585 - NZ_CP024957.1 Streptomyces cavourensis
310 1602104 1602298 - NZ_CP006841.1 Corynebacterium lactis RW2-5
311 3770120 3770314 - NC_007777.1 Frankia casuarinae
312 591630 591824 + NZ_AP022608.1 Mycolicibacterium gadium
313 1680231 1680428 + NC_005042.1 Prochlorococcus marinus subsp. marinus str. CCMP1375
314 3540324 3540518 - NC_008726.1 Mycolicibacterium vanbaalenii PYR-1
315 1335818 1336012 - NZ_CP013738.1 Streptomyces globisporus C-1027
316 6910442 6910636 + NC_010572.1 Streptomyces griseus subsp. griseus NBRC 13350
317 6407498 6407692 + NZ_CP023702.1 Streptomyces nitrosporeus
318 756379 756576 + NZ_AP022321.1 Veillonella nakazawae
319 763631 763828 + NZ_LR134375.1 Veillonella dispar
320 864183 864380 + NZ_LR778174.1 Veillonella parvula
321 1168566 1168760 + NZ_CP011311.1 Corynebacterium camporealensis
322 871979 872176 + NC_016629.1 Desulfocurvibacter africanus subsp. africanus str. Walvis Bay
323 1107647 1107841 - NZ_CP020563.1 Kitasatospora albolonga
324 2842372 2842566 + NZ_CP011112.1 Luteipulveratus mongoliensis
325 1073775 1073972 + NC_015436.1 Sphaerochaeta coccoides DSM 17374
326 2591326 2591523 - NZ_CP014229.1 Desulfovibrio fairfieldensis
327 1133669 1133863 - NZ_CP070242.1 Streptomyces californicus
328 1272084 1272278 - NC_021177.1 Streptomyces fulvissimus DSM 40593
329 45773 45967 + NZ_CP053842.1 Campylobacter corcagiensis
330 2223799 2223996 - NC_014844.1 Pseudodesulfovibrio aespoeensis Aspo-2
331 1578314 1578508 + NC_004369.1 Corynebacterium efficiens YS-314
332 2930758 2930952 - NZ_CP023147.1 Mycobacterium marseillense
333 2328034 2328231 - NZ_CP011454.1 Gemmatimonas phototrophica
334 1069903 1070100 + NZ_CP022987.1 Pusillimonas thiosulfatoxidans
335 1977412 1977618 + NZ_LT996886.1 Tessaracoccus timonensis
336 1335046 1335243 - NZ_LT906470.1 Veillonella rodentium
337 1323217 1323411 - NZ_CP033898.1 Corynebacterium pseudopelargi
338 1322824 1323018 - NZ_CP035299.1 Corynebacterium pelargi
339 3918903 3919100 + NZ_LT907975.1 Pseudodesulfovibrio profundus
340 2654286 2654483 - NC_007519.1 Desulfovibrio alaskensis G20
341 525772 525969 + NZ_AP018558.1 Hydrogenophilus thermoluteolus
342 2327876 2328076 - NZ_CP024955.1 Kyrpidia spormannii
343 722331 722528 + NC_021291.1 Spiribacter salinus M19-40
344 1315984 1316181 + NZ_CP025682.1 Azoarcus pumilus
345 1435461 1435658 + NZ_CP040449.1 Aeromonas simiae
346 5478371 5478565 - NZ_CP051486.1 Streptomyces pratensis
347 3724591 3724788 - NZ_CP046400.1 Pseudodesulfovibrio cashew
348 195416 195613 - NZ_CP031217.1 Halarcobacter bivalviorum
349 1560141 1560338 + NC_017583.1 Spirochaeta thermophila DSM 6578
350 2334840 2335040 - NC_014098.1 Kyrpidia tusciae DSM 2912
351 1411691 1411885 + NZ_CP004353.1 Corynebacterium vitaeruminis DSM 20294
352 2235492 2235692 + NC_019675.1 Cyanobium gracile PCC 6307
353 3185062 3185256 - NC_013757.1 Geodermatophilus obscurus DSM 43160
354 1807731 1807925 - NC_014168.1 Segniliparus rotundus DSM 44985
355 763204 763401 + NC_022664.1 Spiribacter curvatus
356 3672396 3672590 + NZ_AP022595.1 Mycolicibacterium sarraceniae
357 2565665 2565859 + NZ_LR130759.1 Mycobacterium basiliense
358 2227618 2227812 + NZ_LT906483.1 Mycolicibacterium thermoresistibile
359 1460620 1460811 + NZ_CP012547.1 Campylobacter pinnipediorum subsp. pinnipediorum
360 3982954 3983151 - NZ_CP007128.1 Gemmatirosa kalamazoonesis
361 4824805 4824999 - NZ_AP022615.1 Mycobacterium heidelbergense
362 4107932 4108126 - NC_015312.1 Pseudonocardia dioxanivorans CB1190
363 1132262 1132459 + NC_022567.1 Adlercreutzia equolifaciens DSM 19450
364 1122005 1122199 - NZ_CP020570.1 Streptomyces violaceoruber
365 2062646 2062840 + NZ_CP011883.2 Mycobacterium haemophilum DSM 44634
366 1249730 1249924 - NZ_LT906473.1 Corynebacterium cystitidis
367 1192027 1192185 + NZ_CP011541.1 Corynebacterium epidermidicanis
368 1899959 1900153 - NZ_CP027306.1 Streptomyces atratus
369 3567042 3567239 - NZ_CP026538.1 Desulfovibrio carbinolicus
370 918667 918861 + NZ_AP022590.1 Mycobacterium mantenii
371 2196274 2196471 - NC_012489.1 Gemmatimonas aurantiaca T-27
372 893027 893224 + NZ_CP007452.1 Peptoclostridium acidaminophilum DSM 3953
373 1370284 1370478 + NC_020506.1 Corynebacterium callunae DSM 20147
374 51152 51346 - NZ_AP022562.1 Mycobacterium novum
375 1975860 1976054 + NC_015576.1 Mycolicibacter sinensis
376 3993341 3993544 - NC_010296.1 Microcystis aeruginosa NIES-843
377 1174259 1174456 + NC_012796.1 Desulfovibrio magneticus RS-1
378 1580475 1580675 - NZ_CP058670.1 Chryseoglobus indicus
379 97383 97574 + NZ_CP053841.1 Campylobacter blaseri
380 1852928 1853122 + NC_000962.3 Mycobacterium tuberculosis H37Rv
381 1879657 1879851 + NC_015848.1 Mycobacterium canettii CIPT 140010059
382 450741 450929 - NC_013894.1 Thermocrinis albus DSM 14484
383 2460700 2460894 + NZ_AP018164.1 Mycobacterium shigaense
384 3703913 3704107 + NZ_AP022589.1 Mycolicibacter minnesotensis
385 2181821 2182018 - NZ_CP016268.1 Woeseia oceani
386 2116044 2116241 - NZ_CP017253.2 Clostridium taeniosporum
387 1246454 1246648 - NZ_CP060404.1 Streptomyces buecherae
388 125320 125511 - NZ_CP012541.1 Campylobacter concisus
389 1238128 1238325 + NZ_AP022345.1 Fluviibacter phosphoraccumulans
390 2642356 2642550 - NZ_CP031455.1 Streptomyces olivoreticuli subsp. olivoreticuli
391 1380334 1380528 + NZ_CP009220.1 Corynebacterium deserti GIMN1.010
392 1403163 1403357 + NZ_CP015622.1 Corynebacterium crudilactis
393 282626 282823 - NZ_CP011451.1 Nitrosomonas communis
394 1174928 1175122 + NZ_LS483423.1 Jonesia denitrificans
395 6197673 6197867 + NC_022663.1 Mycobacterium kansasii ATCC 12478
396 980636 980830 - NZ_CP014209.1 Isoptericola dokdonensis DS-3
397 3386000 3386194 - NC_016582.1 Streptomyces bingchenggensis BCW-1
398 1583721 1583915 + NZ_AP017369.1 Corynebacterium suranareeae
399 3108402 3108599 - NC_010681.1 Paraburkholderia phytofirmans PsJN
400 1536296 1536490 - NZ_CP040752.1 Streptomyces rectiverticillatus
401 1493771 1493965 - NZ_CP067012.1 Corynebacterium kefirresidentii
402 1201709 1201906 + NZ_CP049134.1 Paraburkholderia tropica
403 2497215 2497409 - NC_013521.1 Sanguibacter keddieii DSM 10542
404 2980393 2980596 - NZ_CP015378.1 Fictibacillus phosphorivorans
405 3088605 3088799 + NZ_AP018920.1 Pseudonocardia autotrophica
406 1115802 1115999 + NZ_CP029640.1 Paraburkholderia dokdonella
407 6677202 6677396 - NC_013595.1 Streptosporangium roseum DSM 43021
408 71510 71701 - NZ_CP053826.1 Campylobacter curvus
409 1449439 1449633 - NZ_CP072827.1 Streptomyces mobaraensis NBRC 13819 = DSM 40847
410 6541173 6541367 + NZ_CP031264.1 Streptacidiphilus bronchialis
411 1430892 1431086 + NC_013530.1 Xylanimonas cellulosilytica DSM 15894
412 2790113 2790310 - NZ_CP024941.1 Paraburkholderia terricola
413 1224852 1225040 - NC_011653.1 Thermosipho africanus TCF52B
414 214594 214791 + NZ_CP066075.1 Paraburkholderia ginsengisoli
415 1763398 1763595 - NC_010622.1 Paraburkholderia phymatum STM815
416 2432338 2432535 + NZ_CP022989.1 Paraburkholderia aromaticivorans
417 2778636 2778833 - NZ_CP024934.1 Paraburkholderia graminis
418 1140375 1140572 + NZ_CP026111.1 Paraburkholderia terrae
419 1114266 1114460 - NZ_CP070228.1 Arcanobacterium phocisimile
420 1117973 1118167 + NZ_LS483427.1 Arcanobacterium haemolyticum
421 1177209 1177406 + NC_021287.1 Caballeronia insecticola
422 2089916 2090113 - NZ_AP018150.1 Mycoavidus cysteinexigens
423 985715 985909 + NC_012704.1 Corynebacterium kroppenstedtii DSM 44385
424 1901093 1901302 - NC_019776.1 Cyanobacterium aponinum PCC 10605
425 1600064 1600261 + NC_007510.1 Burkholderia lata
426 3399793 3399990 - NC_007951.1 Paraburkholderia xenovorans LB400
427 4393319 4393522 - NC_014501.1 Gloeothece verrucosa PCC 7822
428 1835663 1835860 + NZ_CP002580.1 Burkholderia plantarii
429 1657593 1657790 + NZ_CP013450.1 Burkholderia cenocepacia
430 8673065 8673259 + NZ_CP065050.1 Streptomyces solisilvae
431 2882695 2882892 + NZ_CP011503.1 Burkholderia pyrrocinia
432 6197244 6197438 + NZ_CP023202.1 Streptomyces xinghaiensis S187
433 1162472 1162669 + NZ_CP046909.1 Paraburkholderia acidiphila
434 2049946 2050143 - NZ_CP009727.1 Burkholderia mallei
435 835738 835935 - NZ_CP015958.1 Paraburkholderia caribensis
436 2955983 2956180 - NC_007651.1 Burkholderia thailandensis E264
437 46024 46221 - NZ_CP008781.1 Burkholderia pseudomallei
438 4054099 4054296 - NZ_CP009555.1 Burkholderia oklahomensis C6786
439 1685462 1685659 + NZ_CP013414.1 Burkholderia ubonensis
440 861027 861224 - NZ_CP031467.1 Paraburkholderia caffeinilytica
441 1554507 1554704 + NZ_CP020737.1 Paraburkholderia acidophila
442 1806610 1806807 - NZ_CP009795.1 Burkholderia dolosa AU0158
443 1610847 1611044 + NZ_CP013401.1 Burkholderia metallica
444 1606783 1606980 + NZ_CP013398.1 Burkholderia seminalis
445 1599102 1599299 + NZ_CP045235.1 Burkholderia cepacia
446 706893 707075 + NZ_CP068564.1 Keratinibaculum paraultunense
447 1174828 1175025 + NZ_CP046913.1 Paraburkholderia acidisoli
448 243389 243586 + NZ_CP035900.1 Burkholderia glumae
449 1682809 1683006 + NZ_CP013459.1 Burkholderia stagnalis
450 1658647 1658844 + NZ_CP009832.1 Burkholderia multivorans ATCC BAA-247
451 962042 962230 + NZ_CP007389.1 Thermosipho melanesiensis
452 1724751 1724945 + NZ_CP045529.1 Luteimicrobium xylanilyticum
453 6650527 6650721 + NZ_CP048882.1 Streptomyces bathyalis
454 3224245 3224442 + NZ_CP040098.1 Desulfoglaeba alkanexedens ALDC
455 5620004 5620198 + NC_016111.1 Streptomyces cattleya NRRL 8057 = DSM 46488
456 165404 165601 - NZ_CP036246.2 [Arcobacter] porcinus
457 2121475 2121672 + NZ_CP043046.1 Pigmentiphaga aceris
458 222580 222777 + NZ_CP031367.1 Aliarcobacter trophiarum LMG 25534
459 154249 154446 - NZ_CP032099.1 Aliarcobacter skirrowii CCUG 10374
460 1796114 1796311 + NZ_CP032823.1 Aliarcobacter cryaerophilus ATCC 43158
461 2111557 2111754 + NZ_CP053837.1 Aliarcobacter faecis
462 2095064 2095261 + NZ_CP054051.1 Aliarcobacter cibarius
463 2062506 2062703 - NC_014315.1 Nitrosococcus watsonii C-113
464 4512744 4512938 - NZ_CP048878.1 Spartinivicinus ruber
465 459784 459981 + NZ_CP029463.1 Flavobacterium sediminis
466 1028144 1028338 - NZ_CP012333.1 Labilithrix luteola
467 1066275 1066472 + NZ_CP031124.1 Ephemeroptericola cinctiostellae
468 1348603 1348797 - NZ_CP017812.1 Boudabousia tangfeifanii
469 2472260 2472457 - NC_015687.1 Clostridium acetobutylicum DSM 1731
++ More..
Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_008148.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00707.24 0.94 437 65.0 same-strand Translation initiation factor IF-3, C-terminal domain
2 PF00453.20 1.0 465 50 same-strand Ribosomal protein L20
3 PF01409.22 0.61 286 1582 same-strand tRNA synthetases class II core domain (F)
4 PF02912.20 0.61 283 1576 same-strand Aminoacyl tRNA synthetase class II, N-terminal domain
++ More..