ProsmORF-pred
Result : Q11TZ6
Protein Information
Information Type Description
Protein name 30S ribosomal protein S20
NCBI Accession ID CP000383.1
Organism Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465)
Left 2170821
Right 2171078
Strand +
Nucleotide Sequence ATGGCAAATCATAAGTCAGCTTTAAAAAGAATCCGTGCGAACAGAGCGAAATATCTGAGAAACCGCTACCAAATGAAAACTACACGTACTTTCGTGAAGAGACTAAGAGCATCAACTGTAAAAGCAGATGCAAATGAGTTATATAAGAAAGTATCTGGTATGCTTGATAAATTAGCAAAAAGAAACATCATTCATAAAAACAATGCAGCGAACAAAAAATCTAAGTTGGCTAAATTTGTTAATAAATTAGCTGCTTAA
Sequence MANHKSALKRIRANRAKYLRNRYQMKTTRTFVKRLRASTVKADANELYKKVSGMLDKLAKRNIIHKNNAANKKSKLAKFVNKLAA
Source of smORF Swiss-Prot
Function Binds directly to 16S ribosomal RNA. {ECO:0000255|HAMAP-Rule:MF_00500}.
Pubmed ID 17400776
Domain CDD:412349
Functional Category Ribosomal_protein
Uniprot ID Q11TZ6
ORF Length (Amino Acid) 85
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Conservation Analysis
Conservation Analysis
No. of Species: 223
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 2170821 2171078 + NC_008255.1 Cytophaga hutchinsonii ATCC 33406
2 155938 156195 + NZ_CP021235.1 Pontibacter actiniarum
3 600539 600796 + NZ_CP010777.1 Rufibacter radiotolerans
4 32916 33170 - NZ_CP012836.1 Algoriphagus sanaruensis
5 2410001 2410258 + NZ_CP009621.1 Pontibacter korlensis
6 3188189 3188449 + NZ_CP012643.1 Rufibacter tibetensis
7 28851 29105 - NC_019904.1 Echinicola vietnamensis DSM 17526
8 4002027 4002284 + NZ_CP047897.1 Nibribacter ruber
9 2974688 2974951 + NZ_CP014766.1 Pontibacter akesuensis
10 25857 26111 - NZ_CP040106.1 Echinicola rosea
11 1802307 1802561 - NZ_CP030041.1 Echinicola strongylocentroti
12 26333 26587 - NC_018010.1 Belliella baltica DSM 15883
13 5738145 5738405 - NZ_CP055156.1 Adhaeribacter swui
14 134992 135249 + NZ_CP048106.1 Pontibacter pudoricolor
15 962878 963129 - NC_015914.1 Cyclobacterium marinum DSM 745
16 1719918 1720178 - NZ_CP047984.1 Pontibacter russatus
17 4966129 4966389 - NZ_CP055153.1 Adhaeribacter radiodurans
18 1355486 1355743 + NC_018018.1 Bernardetia litoralis DSM 6794
19 3539569 3539826 - NZ_CP034562.1 Flammeovirga pectinis
20 989884 990138 - NZ_CP032382.1 Chryseolinea soli
21 180327 180581 + NZ_CP066775.1 Mucilaginibacter ginkgonis
22 2191219 2191476 - NZ_CP032317.1 Hymenobacter oligotrophus
23 877806 878057 - NZ_CP012040.1 Cyclobacterium amurskyense
24 1123895 1124152 - NZ_CP040896.1 Hymenobacter jejuensis
25 252104 252367 + NC_013037.1 Dyadobacter fermentans DSM 18053
26 467800 468054 - NC_017770.1 Solitalea canadensis DSM 3403
27 5271561 5271824 - NC_015703.1 Runella slithyformis DSM 19594
28 3771926 3772186 - NZ_CP037922.1 Hymenobacter radiodurans
29 826678 826935 + NZ_CP007145.1 Hymenobacter swuensis DY53
30 3506263 3506520 + NZ_CP050954.1 Hymenobacter sp. BT18
31 969324 969578 + NC_013061.1 Pedobacter heparinus DSM 2366
32 1978753 1979007 + NZ_CP048222.1 Rhodocytophaga rosea
33 818006 818260 + NZ_CP060723.1 Pedobacter roseus
34 1445168 1445422 - NZ_CP022743.1 Mucilaginibacter xinganensis
35 4549423 4549674 + NC_015177.1 Pseudopedobacter saltans DSM 12145
36 6215944 6216198 + NZ_CP071878.1 Mucilaginibacter gossypii
37 4532828 4533082 - NZ_CP032869.1 Mucilaginibacter celer
38 5197577 5197831 + NZ_CP024091.1 Pedobacter ginsengisoli
39 53847 54098 - NZ_CP013909.1 Hymenobacter sedentarius
40 4475276 4475533 + NZ_CP029145.1 Hymenobacter nivis
41 1345272 1345526 + NZ_AP017313.1 Mucilaginibacter gotjawali
42 3641592 3641846 + NC_014759.1 Marivirga tractuosa DSM 4126
43 4694012 4694266 + NZ_CP042437.1 Mucilaginibacter ginsenosidivorax
44 2006656 2006913 - NZ_CP029480.1 Arcticibacterium luteifluviistationis
45 2552187 2552438 + NZ_CP013355.1 Lutibacter profundi
46 4437610 4437864 + NZ_CP054139.1 Mucilaginibacter mali
47 4845805 4846059 - NZ_CP042436.1 Mucilaginibacter ginsenosidivorans
48 4214493 4214744 + NZ_CP044285.1 Hymenobacter baengnokdamensis
49 1831624 1831875 - NZ_CP015125.1 Dokdonia donghaensis DSW-1
50 1275801 1276058 - NC_014655.1 Leadbetterella byssophila DSM 17132
51 3080138 3080389 + NZ_CP017478.1 Urechidicola croceus
52 1628672 1628926 - NZ_CP063145.1 Cruoricaptor ignavus
53 2026706 2026957 + NZ_CP061703.1 Mesoflavibacter profundi
54 4118024 4118278 - NZ_CP014337.1 Elizabethkingia bruuniana
55 1932583 1932834 + NZ_CP007034.1 Barnesiella viscericola DSM 18177
56 4081226 4081477 - NC_014041.1 Zunongwangia profunda SM-A87
57 293964 294221 + NZ_CP022386.1 Capnocytophaga gingivalis
58 321554 321805 + NZ_CP020822.1 Tenacibaculum maritimum
59 2601206 2601460 + NZ_CP015067.2 Elizabethkingia anophelis
60 1074965 1075216 + NZ_LT899436.1 Tenacibaculum jejuense
61 656485 656736 - NZ_CP022957.1 Maribacter cobaltidurans
62 1694066 1694317 - NZ_CP018155.1 Tenacibaculum todarodis
63 2669259 2669516 + NZ_CP022022.1 Capnocytophaga endodontalis
64 1122243 1122497 - NC_017045.1 Riemerella anatipestifer ATCC 11845 = DSM 15868
65 2007626 2007877 - NZ_CP019288.1 Kordia antarctica
66 1792893 1793150 - NC_013162.1 Capnocytophaga ochracea DSM 7271
67 5853069 5853335 + NZ_CP020104.1 Spirosoma aerolatum
68 1913996 1914247 - NZ_CP019342.1 Nonlabens tegetincola
69 4063580 4063834 + NZ_CP033914.1 Chryseobacterium shandongense
70 63392 63646 + NZ_LR134404.1 Weeksella virosa
71 2303522 2303779 - NZ_CP022378.1 Capnocytophaga cynodegmi
72 428530 428787 + NZ_CP022387.1 Capnocytophaga stomatis
73 1030969 1031235 - NZ_CP014263.1 Spirosoma montaniterrae
74 1941758 1942012 - NZ_LT906465.1 Chryseobacterium taklimakanense
75 2790713 2790967 + NZ_CP058595.1 Costertonia aggregata
76 4068795 4069046 - NC_015321.1 Fluviicola taffensis DSM 16823
77 653878 654135 + NZ_CP022379.1 Capnocytophaga sputigena
78 3624856 3625110 - NZ_CP033926.1 Chryseobacterium joostei
79 262206 262457 - NZ_CP041637.1 Formosa sediminum
80 3096299 3096553 + NZ_CP034161.1 Epilithonimonas vandammei
81 646319 646573 - NZ_LR134386.1 Chryseobacterium nakagawai
82 3990424 3990678 - NZ_LR134289.1 Chryseobacterium gleum
83 1780711 1780965 - NZ_CP033924.1 Chryseobacterium lactis
84 1862348 1862602 - NC_009614.1 Phocaeicola vulgatus ATCC 8482
85 1289783 1290037 + NZ_LR699004.1 Phocaeicola dorei
86 3572373 3572627 - NZ_CP030848.1 Sphingobacterium hotanense
87 2794493 2794747 + NZ_CP050995.1 Chryseobacterium gallinarum
88 128870 129127 + NZ_CP022389.1 Capnocytophaga canimorsus
89 2440313 2440585 - NZ_CP053435.1 Spirosoma taeanense
90 1639673 1639927 - NZ_CP033932.1 Chryseobacterium bernardetii
91 1033496 1033753 - NZ_LT906449.1 Capnocytophaga haemolytica
92 2974304 2974558 - NZ_LR215980.1 Paraprevotella xylaniphila YIT 11841
93 1626699 1626947 - NZ_CP040812.1 Antarcticibacterium flavum
94 2878532 2878795 + NZ_CP025096.1 Spirosoma pollinicola
95 3240567 3240818 + NC_015844.1 Zobellia galactanivorans
96 1565138 1565404 - NZ_CP010429.1 Spirosoma radiotolerans
97 706573 706827 - NZ_CP033929.1 Chryseobacterium indoltheticum
98 4526604 4526858 - NZ_CP012938.1 Bacteroides ovatus
99 2676539 2676805 - NZ_CP050063.1 Spirosoma aureum
100 2685193 2685447 - NC_014734.1 Paludibacter propionicigenes WB4
101 2881865 2882119 - NZ_LR215974.1 Chryseobacterium taihuense
102 1026408 1026659 - NZ_CP019352.1 Lacinutrix venerupis
103 3720266 3720520 - NZ_LR590470.1 Sphingobacterium daejeonense
104 3827397 3827648 - NZ_CP032050.1 Euzebyella marina
105 3145342 3145596 - NZ_CP022986.1 Chryseobacterium camelliae
106 4755495 4755749 - NZ_CP054012.1 Parabacteroides distasonis
107 2238431 2238682 + NZ_CP020918.1 Flavobacterium faecale
108 2143217 2143468 + NZ_CP061813.1 Polaribacter haliotis
109 1601497 1601751 + NZ_CP049246.1 Sphingobacterium lactis
110 304952 305203 - NZ_CP017774.1 Flavobacterium commune
111 1776303 1776554 + NZ_CP034120.1 Glaciecola amylolytica
112 4997414 4997680 + NZ_CP020105.1 Spirosoma rigui
113 1559173 1559427 + NZ_CP015199.1 Chryseobacterium glaciei
114 222426 222677 + NZ_CP014224.1 Wenyingzhuangia fucanilytica
115 3157536 3157787 + NZ_CP017477.1 Polaribacter vadi
116 4891493 4891744 + NZ_CP025791.1 Flavivirga eckloniae
117 860755 861009 + NZ_CP033920.1 Chryseobacterium carnipullorum
118 1246617 1246868 + NZ_CP034549.1 Nonlabens ponticola
119 1661378 1661629 + NZ_CP007202.1 Siansivirga zeaxanthinifaciens CC-SAMT-1
120 317644 317895 - NZ_CP025938.1 Tamlana carrageenivorans
121 1437957 1438208 + NZ_CP037933.1 Flavobacterium nackdongense
122 1596895 1597146 + NC_013222.1 Robiginitalea biformata HTCC2501
123 3288627 3288875 + NZ_CP042476.1 Antarcticibacterium arcticum
124 2631019 2631273 - NZ_CP027234.1 Bacteroides heparinolyticus
125 160596 160850 + NZ_CP041345.1 Tenuifilum thalassicum
126 2802986 2803240 + NZ_CP023049.2 Chryseobacterium piperi
127 276835 277089 - NZ_LN877293.1 Bacteroides fragilis
128 1235257 1235511 + NZ_AP014564.1 Ichthyobacterium seriolicida
129 2153415 2153669 - NZ_CP027231.1 Bacteroides zoogleoformans
130 3079522 3079773 - NC_018721.1 Psychroflexus torquis ATCC 700755
131 3138610 3138864 + NZ_CP069440.1 Phocaeicola coprophilus
132 4672491 4672745 - NZ_CP015401.2 Bacteroides caecimuris
133 747000 747254 + NZ_CP034930.1 Apibacter raozihei
134 1096092 1096346 + NZ_CP038029.1 Sphingobacterium psychroaquaticum
135 828230 828484 + NZ_CP013210.1 Empedobacter brevis
136 1212149 1212400 + NZ_CP007451.1 Draconibacterium orientale
137 842303 842551 - NZ_CP016359.1 Gramella flava JLT2011
138 668734 668985 - NZ_CP011071.1 Muricauda lutaonensis
139 1723220 1723474 - NZ_CP040530.1 Bacteroides thetaiotaomicron
140 4085623 4085874 - NZ_CP017479.1 Flavobacterium gilvum
141 1533220 1533471 + NZ_CP017688.1 Flavobacterium crassostreae
142 1304686 1304949 + NZ_CP045696.1 Sodaliphilus pleomorphus
143 2888822 2889073 + NZ_CP043612.1 Flavobacterium nitrogenifigens
144 136402 136656 - NZ_CP040908.1 Empedobacter falsenii
145 1851410 1851664 + NZ_AP018042.1 Labilibaculum antarcticum
146 2758359 2758613 + NZ_CP034159.1 Kaistella carnis
147 549964 550215 - NZ_CP019419.1 Polaribacter reichenbachii
148 697414 697668 - NZ_LR590484.1 Sphingobacterium thalpophilum
149 596104 596355 - NZ_CP030104.1 Flagellimonas maritima
150 334758 335006 - NZ_CP028136.1 Gramella fulva
151 3713664 3713915 + NZ_CP012898.1 Algibacter alginicilyticus
152 2667699 2667953 + NZ_CP053698.1 Empedobacter stercoris
153 569836 570087 - NC_018013.1 Aequorivita sublithincola DSM 14238
154 5730816 5731067 - NZ_CP029255.1 Flavobacterium crocinum
155 3000506 3000760 - NZ_LT605205.1 Proteiniphilum saccharofermentans
156 2055095 2055346 - NC_017025.1 Flavobacterium indicum GPTSA100-9 = DSM 17447
157 2477241 2477492 - NC_016001.1 Flavobacterium branchiophilum FL-15
158 1710266 1710517 + NZ_CP038810.1 Flavobacterium sangjuense
159 1807716 1807970 - NZ_LR134503.1 Kaistella jeonii
160 489041 489292 - NC_015945.1 Muricauda ruestringensis DSM 13258
161 2846116 2846364 - NC_008571.1 Gramella forsetii KT0803
162 2948663 2948914 + NZ_CP016907.1 Flavobacterium anhuiense
163 5964785 5965036 - NC_009441.1 Flavobacterium johnsoniae UW101
164 3776476 3776727 - NZ_CP020919.1 Flavobacterium kingsejongi
165 2542898 2543149 + NZ_CP029463.1 Flavobacterium sediminis
166 395521 395772 - NZ_CP039456.1 Changchengzhania lutea
167 2364952 2365206 + NC_015164.1 Phocaeicola salanitronis DSM 18170
168 729136 729399 - NZ_CP015402.2 Muribaculum intestinale
169 2318600 2318854 + NC_020156.1 Nonlabens dokdonensis DSW-6
170 1962646 1962897 + NZ_CP028811.1 Flavobacterium magnum
171 2889201 2889449 + NZ_CP018153.1 Gramella salexigens
172 2724279 2724530 - NZ_LT906459.1 Odoribacter splanchnicus
173 2822332 2822586 + NC_014033.1 Prevotella ruminicola 23
174 652072 652326 + NC_014933.1 Bacteroides helcogenes P 36-108
175 112006 112257 - NZ_CP069450.1 Butyricimonas virosa
176 3512025 3512276 + NZ_CP032819.1 Butyricimonas faecalis
177 3951002 3951253 - NZ_CP029186.1 Flavobacterium album
178 3918887 3919138 - NZ_CP042831.1 Flavobacterium alkalisoli
179 28882 29136 + NZ_CP013195.1 Prevotella enoeca
180 291854 292108 - NC_014370.1 Prevotella melaninogenica ATCC 25845
181 219923 220177 + NZ_CP023863.1 Prevotella jejuni
182 1795575 1795826 - NZ_CP006828.1 Ornithobacterium rhinotracheale ORT-UMN 88
183 2090670 2090921 + NZ_CP029187.1 Flavobacterium pallidum
184 95212 95463 - NZ_CP009976.1 Cellulophaga baltica 18
185 1589599 1589850 + NC_016940.1 Saprospira grandis str. Lewin
186 2578929 2579180 + NC_015167.1 Cellulophaga lytica DSM 7489
187 1778345 1778599 - NZ_CP013118.1 Salinivirga cyanobacteriivorans
188 855341 855592 - NC_015501.1 Porphyromonas asaccharolytica DSM 20707
189 683691 683945 + NZ_CP024727.1 Prevotella intermedia
190 1019952 1020206 + NZ_LS483447.1 Porphyromonas crevioricanis
191 256680 256928 - NC_014230.1 Croceibacter atlanticus HTCC2559
192 467308 467559 - NZ_CP031188.1 Flavobacterium arcticum
193 1294774 1295028 + NZ_CP012074.1 Prevotella fusca JCM 17724
194 2380406 2380657 + NZ_CP054494.1 Flavobacterium columnare
195 2960471 2960725 + NZ_LR134384.1 Prevotella oris
196 1682737 1682988 + NZ_CP053352.1 Winogradskyella helgolandensis
197 2658456 2658710 - NZ_LT608328.1 Petrimonas mucosa
198 3517794 3518045 + NC_016599.1 Owenweeksia hongkongensis DSM 17368
199 583142 583393 - NC_014934.1 Cellulophaga algicola DSM 14237
200 2115654 2115905 + NZ_CP039934.1 Myroides fluvii
201 2349392 2349646 + NZ_CP021904.1 Alkalitalea saponilacus
202 3417929 3418180 - NZ_CP010817.1 Myroides profundi
203 916048 916299 + NZ_CP053348.1 Winogradskyella forsetii
204 890824 891075 + NZ_CP053351.1 Winogradskyella schleiferi
205 1954102 1954356 - NZ_LR134441.1 Kaistella antarctica
206 699522 699773 + NZ_LR027382.1 Alistipes megaguti
207 3444147 3444401 + NZ_CP048113.1 Chitinophaga agri
208 425634 425888 - NC_010729.1 Porphyromonas gingivalis ATCC 33277
209 8571045 8571299 + NC_013132.1 Chitinophaga pinensis DSM 2588
210 1010477 1010728 + NZ_AP019736.1 Alistipes dispar
211 131036 131290 + NZ_CP023777.1 Chitinophaga caeni
212 395275 395526 - NZ_LR134506.1 Porphyromonas cangingivalis
213 1216633 1216884 + NC_018011.1 Alistipes finegoldii DSM 17242
214 6237905 6238162 - NC_016609.1 Niastella koreensis GR20-10
215 5383760 5384014 - NC_015510.1 Haliscomenobacter hydrossis DSM 1100
216 4817132 4817395 + NZ_CP032157.1 Paraflavitalea soli
217 1739460 1739714 + NZ_CP011390.1 Flavisolibacter tropicus
218 2014958 2015209 + NZ_AP019735.1 Alistipes communis
219 1217989 1218240 - NZ_AP023049.1 Alistipes indistinctus
220 2515057 2515311 - NZ_CP037755.1 Pseudocnuella soli
221 399988 400236 + NZ_CP029844.1 Blattabacterium clevelandi
222 248683 248922 - NC_020510.1 Blattabacterium cuenoti BPAA
223 391300 391545 + NC_016621.1 Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu
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