Result : Q0I867
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Photosystem I reaction center subunit IX |
| NCBI Accession ID | CP000435.1 |
| Organism | Synechococcus sp. (strain CC9311) |
| Left | 1907817 |
| Right | 1907936 |
| Strand | - |
| Nucleotide Sequence | ATGAAGAAATTTCTTACAACTGCACCTGTCGTTGCGGCGATTTGGTTCACTCTCACCGCCGGAATCTTGATCGAGTGGAATCGCTTTTTCCCTGATCTCCTCTTCCACCCCATGGGCTGA |
| Sequence | MKKFLTTAPVVAAIWFTLTAGILIEWNRFFPDLLFHPMG |
| Source of smORF | Swiss-Prot |
| Function | May help in the organization of the PsaE and PsaF subunits. {ECO:0000255|HAMAP-Rule:MF_00522}. |
| Pubmed ID | 16938853 |
| Domain | CDD:420030 |
| Functional Category | Others |
| Uniprot ID | Q0I867 |
| ORF Length (Amino Acid) | 39 |
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| Conservation Analysis |
No. of Species: 24
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3164187 | 3164303 | - | NC_019675.1 | Cyanobium gracile PCC 6307 |
| 2 | 5019933 | 5020055 | - | NZ_CP021983.2 | Halomicronema hongdechloris C2206 |
| 3 | 679715 | 679834 | + | NC_019771.1 | Anabaena cylindrica PCC 7122 |
| 4 | 5099537 | 5099656 | + | NC_014248.1 | 'Nostoc azollae' 0708 |
| 5 | 4875738 | 4875857 | + | NC_010628.1 | Nostoc punctiforme PCC 73102 |
| 6 | 2975515 | 2975634 | - | NZ_CP054698.1 | Nostoc edaphicum CCNP1411 |
| 7 | 2524509 | 2524634 | + | NC_004113.1 | Thermosynechococcus vestitus BP-1 |
| 8 | 750425 | 750550 | - | NZ_AP018202.1 | Thermostichus vulcanus NIES-2134 |
| 9 | 1141805 | 1141933 | + | NC_019729.1 | Oscillatoria nigro-viridis PCC 7112 |
| 10 | 5549867 | 5549986 | - | NZ_CP031941.1 | Nostoc sphaeroides |
| 11 | 43585 | 43716 | - | NZ_CP018092.1 | Synechococcus lividus PCC 6715 |
| 12 | 4211954 | 4212073 | - | NZ_CP024785.1 | Nostoc flagelliforme CCNUN1 |
| 13 | 3171915 | 3172034 | + | NZ_CP042326.1 | Euhalothece natronophila Z-M001 |
| 14 | 4343975 | 4344103 | + | NC_010296.1 | Microcystis aeruginosa NIES-843 |
| 15 | 446939 | 447073 | - | NC_005042.1 | Prochlorococcus marinus subsp. marinus str. CCMP1375 |
| 16 | 1430824 | 1430937 | - | NC_009925.1 | Acaryochloris marina MBIC11017 |
| 17 | 3563700 | 3563825 | - | NZ_AP014638.1 | Leptolyngbya boryana IAM M-101 |
| 18 | 329772 | 329879 | - | NC_019776.1 | Cyanobacterium aponinum PCC 10605 |
| 19 | 3504030 | 3504149 | - | NC_014501.1 | Gloeothece verrucosa PCC 7822 |
| 20 | 2220418 | 2220546 | + | NC_019780.1 | Dactylococcopsis salina PCC 8305 |
| 21 | 5748913 | 5749044 | + | NC_019751.1 | Calothrix sp. PCC 6303 |
| 22 | 527530 | 527649 | - | NC_019689.1 | Pleurocapsa sp. PCC 7327 |
| 23 | 732078 | 732191 | - | NC_019748.1 | Stanieria cyanosphaera PCC 7437 |
| 24 | 2028341 | 2028475 | - | NC_019695.1 | Chroococcidiopsis thermalis PCC 7203 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_019675.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00814.27 | 0.83 | 20 | 738.0 | opposite-strand | tRNA N6-adenosine threonylcarbamoyltransferase |
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