Result : A6VLC4
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Cell division protein ZapB |
| NCBI Accession ID | CP000746.1 |
| Organism | Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / 130Z) |
| Left | 448052 |
| Right | 448270 |
| Strand | - |
| Nucleotide Sequence | ATGTCATCAGAAATTTTAGATCAATTAGAAAGCAAAATCCGCCAGGCGGTAGAAACTATCCAGTTGCTTCAGTTGGAAGTGGAAGAGTTAAAAGAAAAAAATGATCAAGCGCAGCAAGCCAATGACGCATTACGTAACGAAAACGAACAACTTAAGGTCGAACATAATAACTGGCAGGAACGTTTACGGTCATTATTAGGTCAAATCGACAACGTTTAG |
| Sequence | MSSEILDQLESKIRQAVETIQLLQLEVEELKEKNDQAQQANDALRNENEQLKVEHNNWQERLRSLLGQIDNV |
| Source of smORF | Swiss-Prot |
| Function | Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA. {ECO:0000255|HAMAP-Rule:MF_01196}. |
| Pubmed ID | 21118570 |
| Domain | CDD:416309 |
| Functional Category | Others |
| Uniprot ID | A6VLC4 |
| ORF Length (Amino Acid) | 72 |
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| Conservation Analysis |
No. of Species: 127
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2188554 | 2188772 | - | NC_006300.1 | [Mannheimia] succiniciproducens MBEL55E |
| 2 | 1780502 | 1780720 | - | NZ_CP015031.1 | Basfia succiniciproducens |
| 3 | 1001250 | 1001468 | - | NZ_CP028926.1 | Pasteurella multocida |
| 4 | 1937455 | 1937673 | + | NZ_LT906448.1 | Pasteurella dagmatis |
| 5 | 969925 | 970143 | - | NZ_CP006954.1 | Bibersteinia trehalosi USDA-ARS-USMARC-188 |
| 6 | 1419355 | 1419573 | - | NZ_CP016604.1 | Otariodibacter oris |
| 7 | 465855 | 466073 | - | NZ_LT906463.1 | Haemophilus pittmaniae |
| 8 | 1379 | 1597 | - | NZ_CP018804.1 | Histophilus somni |
| 9 | 1036672 | 1036890 | - | NZ_CP006944.1 | Mannheimia varigena USDA-ARS-USMARC-1312 |
| 10 | 1651940 | 1652158 | + | NZ_CP015029.1 | Frederiksenia canicola |
| 11 | 1358641 | 1358859 | + | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 12 | 1563003 | 1563221 | - | NZ_CP055305.1 | Mannheimia pernigra |
| 13 | 191147 | 191365 | + | NC_011852.1 | Glaesserella parasuis SH0165 |
| 14 | 1566439 | 1566657 | + | NZ_CP046531.1 | Mannheimia ovis |
| 15 | 1607184 | 1607402 | + | NZ_CP061280.1 | Mannheimia bovis |
| 16 | 1359570 | 1359788 | - | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 17 | 1653021 | 1653239 | - | NZ_CP040863.1 | Rodentibacter heylii |
| 18 | 125845 | 126063 | + | NZ_CP015425.1 | [Haemophilus] ducreyi |
| 19 | 438725 | 438943 | - | NZ_LS483443.1 | Aggregatibacter segnis ATCC 33393 |
| 20 | 1750803 | 1751021 | + | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 21 | 368948 | 369166 | - | NZ_CP009610.1 | Haemophilus influenzae |
| 22 | 492792 | 493010 | - | NZ_LS483429.1 | Haemophilus aegyptius |
| 23 | 729946 | 730164 | - | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 24 | 848609 | 848827 | + | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 25 | 805477 | 805695 | + | NZ_CP009159.1 | Actinobacillus suis ATCC 33415 |
| 26 | 538584 | 538802 | - | NZ_LS483458.1 | Haemophilus haemolyticus |
| 27 | 359417 | 359635 | - | NZ_LR134167.1 | Avibacterium volantium |
| 28 | 988055 | 988273 | + | NZ_CP016180.1 | Pasteurella skyensis |
| 29 | 785539 | 785736 | - | NZ_LR134510.1 | Actinobacillus delphinicola |
| 30 | 80577 | 80819 | + | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 31 | 4555553 | 4555783 | - | NZ_CP028897.1 | Dongshaea marina |
| 32 | 1649246 | 1649488 | + | NZ_CP026364.1 | Proteus hauseri |
| 33 | 3527070 | 3527312 | + | NC_010554.1 | Proteus mirabilis HI4320 |
| 34 | 1798347 | 1798589 | + | NZ_CP023706.1 | Edwardsiella tarda |
| 35 | 4925105 | 4925347 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 36 | 53187 | 53405 | - | NZ_CP016605.1 | Bisgaardia hudsonensis |
| 37 | 3537314 | 3537556 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 38 | 62547 | 62789 | + | NZ_CP016043.1 | Edwardsiella hoshinae |
| 39 | 1637813 | 1638055 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 40 | 4416196 | 4416438 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 41 | 101930 | 102172 | + | NZ_CP050150.1 | Hafnia alvei |
| 42 | 4242612 | 4242854 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 43 | 917950 | 918189 | + | NZ_CP029736.1 | Providencia rettgeri |
| 44 | 3620481 | 3620720 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 45 | 129345 | 129587 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 46 | 4440009 | 4440251 | - | NZ_CP025799.1 | Dickeya zeae |
| 47 | 4568569 | 4568808 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 48 | 3975877 | 3976116 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 49 | 217550 | 217792 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 50 | 207918 | 208160 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 51 | 3077375 | 3077617 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 52 | 4112517 | 4112759 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 53 | 4655057 | 4655299 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 54 | 3226762 | 3227004 | - | NZ_CP060401.1 | Xenorhabdus nematophila |
| 55 | 3722130 | 3722372 | - | NZ_LR134531.1 | Pragia fontium |
| 56 | 5548238 | 5548480 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 57 | 197764 | 198006 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 58 | 1734691 | 1734933 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 59 | 4559616 | 4559855 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 60 | 132614 | 132853 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 61 | 3675799 | 3676041 | + | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 62 | 4304050 | 4304289 | - | NZ_LT615367.1 | Dickeya aquatica |
| 63 | 3212128 | 3212370 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 64 | 4237776 | 4238015 | - | NZ_CP015581.1 | Tatumella citrea |
| 65 | 4005161 | 4005400 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 66 | 3002200 | 3002442 | - | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 67 | 2148180 | 2148419 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 68 | 3650205 | 3650447 | - | NZ_CP065534.1 | Lonsdalea populi |
| 69 | 937663 | 937905 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 70 | 3843749 | 3843988 | - | NZ_CP023567.1 | Erwinia pyrifoliae |
| 71 | 106801 | 107040 | + | NZ_CP043727.1 | Yersinia canariae |
| 72 | 4587427 | 4587666 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 73 | 109304 | 109543 | + | NZ_CP032487.1 | Yersinia hibernica |
| 74 | 219169 | 219408 | + | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 75 | 1358579 | 1358821 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 76 | 1889699 | 1889941 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 77 | 254174 | 254413 | + | NZ_CP029185.2 | Limnobaculum parvum |
| 78 | 1054779 | 1055021 | - | NZ_CP014056.2 | Grimontia hollisae |
| 79 | 2576569 | 2576808 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 80 | 4474264 | 4474503 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 81 | 1726088 | 1726327 | + | NZ_CP007230.1 | Yersinia similis |
| 82 | 4576956 | 4577195 | - | NZ_CP046293.1 | Yersinia intermedia |
| 83 | 515748 | 515990 | + | NZ_CP070624.1 | Photobacterium damselae subsp. damselae |
| 84 | 2996385 | 2996624 | + | NZ_CP009787.1 | Yersinia rohdei |
| 85 | 5157854 | 5158093 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 86 | 1089474 | 1089713 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 87 | 168217 | 168456 | + | NZ_CP034148.1 | Pantoea agglomerans |
| 88 | 176712 | 176951 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 89 | 189400 | 189639 | + | NZ_CP038853.1 | Pantoea vagans |
| 90 | 167021 | 167260 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 91 | 3866567 | 3866806 | - | NZ_CP015749.1 | Pectobacterium parmentieri |
| 92 | 1479620 | 1479859 | - | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 93 | 1819968 | 1820207 | + | NZ_CP047495.1 | Pectobacterium brasiliense |
| 94 | 195542 | 195781 | + | NZ_CP051652.1 | Pectobacterium carotovorum |
| 95 | 207988 | 208227 | + | NZ_CP065044.1 | Pectobacterium aroidearum |
| 96 | 3496628 | 3496867 | - | NZ_CP017482.1 | Pectobacterium polaris |
| 97 | 148704 | 148943 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 98 | 199683 | 199892 | + | NZ_CP012621.1 | Zobellella denitrificans |
| 99 | 2374586 | 2374828 | - | NZ_CP035688.1 | Vibrio metoecus |
| 100 | 2715412 | 2715654 | - | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 101 | 76239 | 76478 | + | NZ_CP071320.1 | Serratia ureilytica |
| 102 | 4325481 | 4325720 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 103 | 5116911 | 5117150 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 104 | 5212965 | 5213204 | - | NZ_LR134494.1 | Serratia quinivorans |
| 105 | 1502458 | 1502709 | - | NZ_CP021377.1 | Oceanisphaera profunda |
| 106 | 2650830 | 2651072 | - | NZ_CP033078.1 | Vibrio zhugei |
| 107 | 2676074 | 2676313 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 108 | 190825 | 191064 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 109 | 228707 | 228949 | + | NZ_CP040021.1 | Salinivibrio kushneri |
| 110 | 3963064 | 3963273 | + | NZ_CP040449.1 | Aeromonas simiae |
| 111 | 3386554 | 3386763 | + | NZ_CP044060.1 | Aeromonas veronii |
| 112 | 4592848 | 4593057 | - | NZ_AP022188.1 | Aeromonas media |
| 113 | 266437 | 266679 | + | NZ_CP030788.1 | Vibrio campbellii |
| 114 | 202166 | 202375 | + | NZ_CP050851.1 | Aeromonas hydrophila |
| 115 | 3211850 | 3212092 | - | NZ_AP014635.1 | Vibrio tritonius |
| 116 | 3634937 | 3635146 | + | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 117 | 141504 | 141743 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 118 | 2084752 | 2084994 | + | NZ_CP046793.1 | Vibrio metschnikovii |
| 119 | 2009457 | 2009708 | - | NZ_CP021376.1 | Oceanisphaera avium |
| 120 | 232572 | 232814 | + | NZ_CP039700.1 | Vibrio cyclitrophicus |
| 121 | 1707987 | 1708229 | + | NZ_CP065150.1 | Vibrio kanaloae |
| 122 | 3059481 | 3059723 | - | NC_011753.2 | Vibrio atlanticus |
| 123 | 3693357 | 3693566 | + | NZ_CP051883.1 | Aeromonas salmonicida |
| 124 | 4245735 | 4245944 | - | NZ_LR134376.1 | Aeromonas encheleia |
| 125 | 138931 | 139173 | - | NC_013456.1 | Vibrio antiquarius |
| 126 | 3009929 | 3010171 | - | NZ_CP031781.1 | Vibrio parahaemolyticus |
| 127 | 3747942 | 3748169 | - | NZ_CP044399.1 | Moritella marina ATCC 15381 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP023706.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF03320.15 | 0.72 | 91 | 3049 | opposite-strand | Bacterial fructose-1,6-bisphosphatase, glpX-encoded |
| 2 | PF07724.16 | 0.65 | 82 | 1772.0 | opposite-strand | AAA domain (Cdc48 subfamily) |
| 3 | PF03737.17 | 0.65 | 83 | 83 | opposite-strand | Aldolase/RraA |
| 4 | PF00227.28 | 0.64 | 81 | 3114 | opposite-strand | Proteasome subunit |
| 5 | PF05036.15 | 0.61 | 77 | 3740 | opposite-strand | SPOR domain |
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