Result : Q0ANQ8
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 50S ribosomal protein L29 |
| NCBI Accession ID | CP000449.1 |
| Organism | Maricaulis maris (strain MCS10) |
| Left | 1941159 |
| Right | 1941365 |
| Strand | - |
| Nucleotide Sequence | ATGAAACCCGTTGACGTTCGCGCCATGACAGAAGATCAGCTCAAGGATTCACTCCTGAAGCTGAAGGAAGAACAATTCAAACTGCGGTTCCAGCAGGCTTCGGGCCAGATGGAAAACACCGCTCGCTACGGCCAGATTCGCCGCGATATCGCGCGCATTCAGACGGTCCAGACCGAGCGGAATTCGCAAGAAGAGCAAGGGAGCTGA |
| Sequence | MKPVDVRAMTEDQLKDSLLKLKEEQFKLRFQQASGQMENTARYGQIRRDIARIQTVQTERNSQEEQGS |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl09943. Profile Description: N/A. This family represents the N-terminal region (approximately 8 residues) of the eukaryotic mitochondrial 39-S ribosomal protein L47 (MRP-L47). Mitochondrial ribosomal proteins (MRPs) are the counterparts of the cytoplasmic ribosomal proteins, in that they fulfil similar functions in protein biosynthesis. However, they are distinct in number, features and primary structure. |
| Pubmed ID | |
| Domain | CDD:415815 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q0ANQ8 |
| ORF Length (Amino Acid) | 68 |
++ More..
| Conservation Analysis |
No. of Species: 332
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1314261 | 1314464 | - | NZ_CP071057.1 | Marinicauda algicola |
| 2 | 2876695 | 2876901 | - | NC_009937.1 | Azorhizobium caulinodans ORS 571 |
| 3 | 903490 | 903693 | + | NZ_CP018911.1 | Glycocaulis alkaliphilus |
| 4 | 924572 | 924778 | + | NZ_CP029353.1 | Azospirillum thermophilum |
| 5 | 2692696 | 2692896 | - | NZ_LT960614.1 | Hartmannibacter diazotrophicus |
| 6 | 1898935 | 1899156 | + | NC_014414.1 | Parvularcula bermudensis HTCC2503 |
| 7 | 4394329 | 4394526 | + | NZ_CP021112.1 | Pseudorhodoplanes sinuspersici |
| 8 | 4254429 | 4254629 | - | NZ_CP020330.1 | Martelella mediterranea DSM 17316 |
| 9 | 2475995 | 2476201 | - | NZ_CP054619.1 | Azospirillum oryzae |
| 10 | 359058 | 359264 | + | NZ_CP029829.1 | Azospirillum ramasamyi |
| 11 | 3103463 | 3103669 | - | NC_017584.1 | Rhodospirillum rubrum F11 |
| 12 | 312771 | 312977 | - | NZ_CP012401.1 | Azospirillum thiophilum |
| 13 | 3659987 | 3660187 | - | NZ_AP014946.1 | Variibacter gotjawalensis |
| 14 | 2000723 | 2000896 | - | NZ_CP022110.1 | Nitrospirillum amazonense CBAmc |
| 15 | 4287145 | 4287345 | - | NZ_CP010803.1 | Martelella endophytica |
| 16 | 1512220 | 1512411 | + | NC_017059.1 | Pararhodospirillum photometricum DSM 122 |
| 17 | 3563776 | 3563976 | - | NZ_CP058907.1 | Rhodopseudomonas palustris |
| 18 | 1454312 | 1454509 | - | NZ_CP054836.1 | Oricola thermophila |
| 19 | 1245874 | 1246077 | + | NZ_CP030265.1 | Skermanella pratensis |
| 20 | 3617834 | 3618034 | + | NZ_CP071454.1 | Rhizobium lentis |
| 21 | 2550717 | 2550920 | + | NZ_CP032509.1 | Georhizobium profundi |
| 22 | 1737518 | 1737718 | + | NZ_CP020906.1 | Rhizobium etli |
| 23 | 1785827 | 1786027 | + | NZ_CP013500.1 | Rhizobium esperanzae |
| 24 | 1786816 | 1787016 | + | NZ_CP071604.1 | Rhizobium binae |
| 25 | 1781814 | 1782014 | + | NZ_CP013532.1 | Rhizobium phaseoli |
| 26 | 400549 | 400755 | + | NZ_CP030126.1 | Indioceanicola profundi |
| 27 | 3933340 | 3933534 | + | NZ_CP046052.1 | Methylocystis heyeri |
| 28 | 2378718 | 2378918 | - | NZ_AP014648.1 | Methyloceanibacter caenitepidi |
| 29 | 1512035 | 1512241 | + | NZ_CP012946.1 | Blastochloris viridis |
| 30 | 2018755 | 2018955 | + | NZ_CP071678.1 | Rhizobium ruizarguesonis |
| 31 | 1132756 | 1132950 | + | NZ_CP029479.1 | Phenylobacterium parvum |
| 32 | 1525667 | 1525867 | + | NC_020059.1 | Rhizobium tropici CIAT 899 |
| 33 | 1930469 | 1930669 | - | NZ_CP059896.1 | Ciceribacter thiooxidans |
| 34 | 3307349 | 3307549 | - | NZ_CP018171.1 | Mesorhizobium oceanicum |
| 35 | 2004283 | 2004459 | + | NZ_CP044331.1 | Methylocystis parvus |
| 36 | 1784304 | 1784504 | + | NZ_CP032694.1 | Rhizobium jaguaris |
| 37 | 1741313 | 1741513 | + | NZ_CP071612.1 | Rhizobium bangladeshense |
| 38 | 2951403 | 2951609 | + | NC_009719.1 | Parvibaculum lavamentivorans DS-1 |
| 39 | 48776 | 48985 | + | NC_023065.1 | Magnetospirillum gryphiswaldense MSR-1 v2 |
| 40 | 1924873 | 1925073 | - | NZ_CP017940.1 | Phyllobacterium zundukense |
| 41 | 1150605 | 1150805 | + | NZ_CP023067.1 | Ensifer sojae CCBAU 05684 |
| 42 | 1106031 | 1106231 | + | NZ_CP034909.1 | Ensifer alkalisoli |
| 43 | 1912169 | 1912375 | - | NZ_AP018907.1 | Blastochloris tepida |
| 44 | 1483379 | 1483579 | + | NC_020528.1 | Sinorhizobium meliloti 2011 |
| 45 | 2216890 | 2217096 | - | NC_012982.1 | Hirschia baltica ATCC 49814 |
| 46 | 1015649 | 1015849 | - | NZ_CP046908.1 | Stappia indica |
| 47 | 108396 | 108572 | - | NZ_CP048630.1 | Ancylobacter pratisalsi |
| 48 | 1753348 | 1753548 | + | NZ_CP053086.1 | Pelagibacterium halotolerans |
| 49 | 1521457 | 1521666 | + | NC_014217.1 | Starkeya novella DSM 506 |
| 50 | 1504223 | 1504423 | + | NZ_CP013107.1 | Sinorhizobium americanum |
| 51 | 1167534 | 1167734 | + | NZ_CP015880.1 | Ensifer adhaerens |
| 52 | 1290810 | 1291010 | + | NZ_CP029451.1 | Sinorhizobium fredii CCBAU 25509 |
| 53 | 4056826 | 4057023 | - | NZ_CP029426.1 | Bradyrhizobium amphicarpaeae |
| 54 | 2993201 | 2993398 | + | NC_017082.1 | Bradyrhizobium cosmicum |
| 55 | 1430678 | 1430878 | - | NZ_CP064063.1 | Brucella anthropi |
| 56 | 2629323 | 2629523 | - | NZ_CP054027.1 | Rhizobium hidalgonense |
| 57 | 1352245 | 1352445 | + | NZ_CP034998.1 | Rhizobium acidisoli |
| 58 | 782158 | 782358 | - | NZ_CP054021.1 | Rhizobium indicum |
| 59 | 1845327 | 1845527 | + | NC_015259.1 | Polymorphum gilvum SL003B-26A1 |
| 60 | 1536143 | 1536343 | + | NZ_LR723670.1 | Pseudorhizobium flavum |
| 61 | 1446033 | 1446233 | + | NZ_FO082820.1 | Pseudorhizobium banfieldiae |
| 62 | 5157694 | 5157891 | + | NZ_CP050066.1 | Bradyrhizobium symbiodeficiens |
| 63 | 1880716 | 1880907 | + | NZ_CP024201.1 | Caulobacter mirabilis |
| 64 | 6126853 | 6127050 | + | NZ_CP044543.1 | Bradyrhizobium betae |
| 65 | 2093029 | 2093226 | + | NZ_CP042582.1 | Hypericibacter adhaerens |
| 66 | 1194749 | 1194949 | - | NC_010103.1 | Brucella canis ATCC 23365 |
| 67 | 1195860 | 1196060 | - | NC_004310.3 | Brucella suis 1330 |
| 68 | 1201648 | 1201848 | - | NC_009505.1 | Brucella ovis ATCC 25840 |
| 69 | 1202175 | 1202375 | - | NC_013119.1 | Brucella microti CCM 4915 |
| 70 | 791956 | 792156 | + | NC_003317.1 | Brucella melitensis bv. 1 str. 16M |
| 71 | 791946 | 792146 | + | NC_022905.1 | Brucella ceti TE10759-12 |
| 72 | 1211118 | 1211318 | - | NC_007618.1 | Brucella abortus 2308 |
| 73 | 1510721 | 1510921 | + | NZ_LT605585.1 | Brucella inopinata |
| 74 | 1479849 | 1480049 | - | NC_012846.1 | Bartonella grahamii as4aup |
| 75 | 2018883 | 2019062 | + | NC_011894.1 | Methylobacterium nodulans ORS 2060 |
| 76 | 2465304 | 2465480 | - | NZ_CP045423.1 | Microvirga thermotolerans |
| 77 | 2636892 | 2637092 | + | NZ_CP072611.1 | Aureimonas populi |
| 78 | 247651 | 247848 | - | NZ_CP022048.2 | Brevundimonas vesicularis |
| 79 | 3253548 | 3253751 | + | NC_014664.1 | Rhodomicrobium vannielii ATCC 17100 |
| 80 | 1536994 | 1537194 | + | NZ_CP041238.1 | Ensifer mexicanus |
| 81 | 1295844 | 1296044 | - | NZ_CP022604.1 | [Ochrobactrum] quorumnocens |
| 82 | 1377659 | 1377856 | - | NZ_CP029544.1 | Lactobacillus helsingborgensis |
| 83 | 1466931 | 1467128 | - | NZ_CP029477.1 | Lactobacillus kullabergensis |
| 84 | 2016009 | 2016200 | + | NZ_CP061205.1 | Kordiimonas pumila |
| 85 | 4097249 | 4097464 | - | NZ_CP029553.1 | Methylobacterium terrae |
| 86 | 5134401 | 5134598 | - | NC_020453.1 | Bradyrhizobium oligotrophicum S58 |
| 87 | 213929 | 214129 | + | NC_002678.2 | Mesorhizobium japonicum MAFF 303099 |
| 88 | 1081875 | 1082075 | - | NZ_LR134527.1 | Bartonella elizabethae |
| 89 | 1492712 | 1492909 | + | NC_014375.1 | Brevundimonas subvibrioides ATCC 15264 |
| 90 | 3193230 | 3193430 | - | NZ_CP015064.1 | Mesorhizobium ciceri biovar biserrulae |
| 91 | 4210833 | 4211033 | - | NZ_CP015318.1 | Mesorhizobium amorphae CCNWGS0123 |
| 92 | 3595514 | 3595711 | + | NZ_CP016428.1 | Bradyrhizobium icense |
| 93 | 4740215 | 4740415 | - | NC_015675.1 | Mesorhizobium opportunistum WSM2075 |
| 94 | 6050121 | 6050321 | + | NZ_CP050296.1 | Mesorhizobium huakuii |
| 95 | 4143040 | 4143240 | - | NZ_CP033361.1 | Mesorhizobium erdmanii |
| 96 | 4781534 | 4781734 | - | NZ_CP033507.1 | Mesorhizobium jarvisii |
| 97 | 3010213 | 3010410 | + | NZ_CP042968.1 | Bradyrhizobium paxllaeri |
| 98 | 4305691 | 4305891 | - | NC_019973.1 | Mesorhizobium australicum WSM2073 |
| 99 | 2360154 | 2360369 | + | NC_010505.1 | Methylobacterium radiotolerans JCM 2831 |
| 100 | 5603061 | 5603258 | - | NZ_CP043538.1 | Methylobacterium mesophilicum SR1.6/6 |
| 101 | 1281334 | 1281534 | - | NZ_LR134529.1 | Bartonella vinsonii |
| 102 | 975014 | 975214 | - | NC_020300.1 | Bartonella australis Aust/NH1 |
| 103 | 4717165 | 4717362 | - | NZ_CP030051.1 | Bradyrhizobium guangdongense |
| 104 | 3244763 | 3244969 | - | NZ_CP065915.1 | Pelagovum pacificum |
| 105 | 1602794 | 1602994 | - | NC_010161.1 | Bartonella tribocorum CIP 105476 |
| 106 | 980087 | 980296 | + | NZ_CP040517.1 | Luteithermobacter gelatinilyticus |
| 107 | 3262894 | 3263100 | + | NZ_CP025611.1 | Niveispirillum cyanobacteriorum |
| 108 | 1307783 | 1307983 | + | NZ_CP024199.1 | Thalassospira marina |
| 109 | 1195083 | 1195283 | - | NZ_CP031844.2 | Bartonella krasnovii |
| 110 | 832700 | 832900 | + | NZ_CP031843.2 | Bartonella kosoyi |
| 111 | 1025608 | 1025808 | - | NC_014932.1 | Bartonella clarridgeiae 73 |
| 112 | 689833 | 690033 | + | NC_008783.1 | Bartonella bacilliformis KC583 |
| 113 | 715989 | 716189 | + | NC_008783.1 | Bartonella bacilliformis KC583 |
| 114 | 1903504 | 1903704 | + | NZ_CP031555.1 | Thalassospira indica |
| 115 | 1271017 | 1271217 | + | NZ_HG938353.1 | Neorhizobium galegae bv. orientalis str. HAMBI 540 |
| 116 | 3966912 | 3967109 | - | NZ_CP022219.1 | Bradyrhizobium guangxiense |
| 117 | 3427076 | 3427273 | + | NZ_LS398110.1 | Bradyrhizobium vignae |
| 118 | 5867613 | 5867810 | - | NZ_CP032617.1 | Bradyrhizobium diazoefficiens |
| 119 | 5590085 | 5590282 | - | NZ_CP058354.1 | Bradyrhizobium japonicum |
| 120 | 4198199 | 4198396 | + | NZ_CP022221.1 | Bradyrhizobium zhanjiangense |
| 121 | 6281486 | 6281683 | - | NZ_CP030050.1 | Bradyrhizobium arachidis |
| 122 | 5723151 | 5723348 | + | NZ_CP029425.1 | Bradyrhizobium ottawaense |
| 123 | 2743071 | 2743265 | - | NZ_CP041690.1 | Youhaiella tibetensis |
| 124 | 3533319 | 3533513 | + | NZ_CP068983.1 | Paradevosia shaoguanensis |
| 125 | 650309 | 650494 | + | NZ_CP003182.2 | Granulibacter bethesdensis CGDNIH4 |
| 126 | 3027263 | 3027460 | + | NZ_CP030053.1 | Bradyrhizobium guangzhouense |
| 127 | 337983 | 338183 | + | NZ_CP061202.1 | Rhodobacter capsulatus |
| 128 | 1586406 | 1586606 | + | NZ_CP006877.1 | Rhizobium gallicum bv. gallicum R602sp |
| 129 | 1668908 | 1669108 | - | NZ_CP034328.1 | Tabrizicola piscis |
| 130 | 2048862 | 2049059 | - | NZ_LR588407.1 | Brevundimonas vancanneytii |
| 131 | 2868068 | 2868268 | - | NZ_CP049250.1 | Rhizobium rhizoryzae |
| 132 | 415662 | 415856 | + | NZ_CP011391.1 | Faecalibaculum rodentium |
| 133 | 1137129 | 1137329 | - | NZ_HG965802.1 | Bartonella henselae |
| 134 | 941205 | 941411 | + | NZ_CP067016.1 | Anaerococcus obesiensis |
| 135 | 325904 | 326110 | + | NZ_CP066014.1 | Anaerococcus vaginalis |
| 136 | 1436077 | 1436268 | + | NC_011916.1 | Caulobacter vibrioides NA1000 |
| 137 | 394355 | 394552 | + | NZ_CP044496.1 | Lactobacillus acetotolerans |
| 138 | 570830 | 571030 | + | NZ_AP019773.1 | Bartonella quintana |
| 139 | 1710956 | 1711162 | + | NZ_CP036532.1 | Roseitalea porphyridii |
| 140 | 381173 | 381373 | - | NZ_CP040818.1 | Paraoceanicella profunda |
| 141 | 2898191 | 2898394 | - | NC_017956.1 | Tistrella mobilis KA081020-065 |
| 142 | 1606095 | 1606286 | + | NZ_CP027850.1 | Caulobacter segnis |
| 143 | 1535010 | 1535210 | - | NZ_CP053856.1 | Rhizobium pusense |
| 144 | 342289 | 342486 | + | NZ_CP059276.1 | Lactobacillus taiwanensis |
| 145 | 337584 | 337781 | + | NC_008530.1 | Lactobacillus gasseri ATCC 33323 = JCM 1131 |
| 146 | 340531 | 340728 | + | NZ_AP018549.1 | Lactobacillus paragasseri |
| 147 | 1546433 | 1546630 | - | NZ_CP015444.1 | Lactobacillus helveticus |
| 148 | 1277853 | 1278050 | - | NZ_CP029476.1 | Lactobacillus apis |
| 149 | 1303073 | 1303276 | + | NC_007794.1 | Novosphingobium aromaticivorans DSM 12444 |
| 150 | 3261328 | 3261528 | - | NZ_CP049241.1 | Rhizobium pseudoryzae |
| 151 | 644521 | 644742 | - | NC_004572.3 | Tropheryma whipplei str. Twist |
| 152 | 72410 | 72610 | + | NZ_CP048632.1 | Rhizobium oryzihabitans |
| 153 | 923787 | 923987 | + | NZ_CP010401.1 | Bartonella ancashensis |
| 154 | 1627079 | 1627279 | - | NZ_CP061003.1 | Agrobacterium tumefaciens |
| 155 | 1504537 | 1504734 | + | NC_007406.1 | Nitrobacter winogradskyi Nb-255 |
| 156 | 1804501 | 1804698 | + | NZ_CP021330.1 | Maritalea myrionectae |
| 157 | 1325086 | 1325289 | + | NZ_CP019044.1 | Salaquimonas pukyongi |
| 158 | 1086150 | 1086368 | - | NZ_CP053923.1 | Defluviicoccus vanus |
| 159 | 1307762 | 1307962 | + | NZ_CP004388.1 | Thalassospira xiamenensis M-5 = DSM 17429 |
| 160 | 913663 | 913860 | + | NZ_AP019700.1 | Stella humosa |
| 161 | 4311493 | 4311696 | - | NZ_CP006644.1 | Sphingomonas sanxanigenens DSM 19645 = NX02 |
| 162 | 1156381 | 1156572 | - | NZ_CP039964.1 | Pseudorhodobacter turbinis |
| 163 | 295175 | 295372 | + | NC_021181.2 | Lactobacillus acidophilus La-14 |
| 164 | 358394 | 358591 | + | NZ_CP061341.1 | Lactobacillus kefiranofaciens |
| 165 | 398170 | 398367 | + | NZ_CP059829.1 | Lactobacillus ultunensis |
| 166 | 406392 | 406589 | + | NZ_CP018809.1 | Lactobacillus jensenii |
| 167 | 290274 | 290480 | + | NC_009952.1 | Dinoroseobacter shibae DFL 12 = DSM 16493 |
| 168 | 3451478 | 3451681 | - | NZ_CP010836.1 | Sphingomonas hengshuiensis |
| 169 | 1319297 | 1319482 | + | NZ_CP016591.1 | Tsuneonella dongtanensis |
| 170 | 2811262 | 2811465 | + | NZ_CP061498.1 | Roseicitreum antarcticum |
| 171 | 947827 | 948030 | + | NZ_CP024899.1 | Rhodobaca barguzinensis |
| 172 | 3196920 | 3197099 | + | NZ_CP009291.1 | Novosphingobium pentaromativorans US6-1 |
| 173 | 2187796 | 2188002 | - | NZ_CP019937.1 | Ketogulonicigenium robustum |
| 174 | 1005022 | 1005216 | + | NC_014816.1 | Asticcacaulis excentricus CB 48 |
| 175 | 2551261 | 2551467 | - | NZ_CP003984.1 | Planktomarina temperata RCA23 |
| 176 | 1797435 | 1797641 | - | NZ_CP045072.1 | Paracoccus kondratievae |
| 177 | 7035917 | 7036114 | - | NZ_CP039690.1 | Phreatobacter stygius |
| 178 | 644141 | 644347 | - | NZ_CP024422.1 | Paracoccus yeei |
| 179 | 2065916 | 2066122 | - | NZ_CP025430.1 | Paracoccus zhejiangensis |
| 180 | 162369 | 162572 | + | NZ_CP042261.1 | Qingshengfaniella alkalisoli |
| 181 | 3702228 | 3702428 | - | NZ_CP019437.1 | Thioclava nitratireducens |
| 182 | 1121541 | 1121747 | - | NZ_CP030239.1 | Paracoccus mutanolyticus |
| 183 | 57110 | 57301 | - | NZ_CP060244.1 | Entomobacter blattae |
| 184 | 72365 | 72571 | + | NZ_CP011452.2 | Croceibacterium atlanticum |
| 185 | 3832094 | 3832294 | - | NZ_CP053562.1 | Thioclava electrotropha |
| 186 | 1536743 | 1536952 | + | NZ_CP004372.1 | Roseibacterium elongatum DSM 19469 |
| 187 | 274306 | 274503 | + | NZ_CP031835.1 | Lactobacillus amylolyticus |
| 188 | 1152387 | 1152614 | + | NZ_CP053708.1 | Lichenicola cladoniae |
| 189 | 625377 | 625553 | - | NC_011666.1 | Methylocella silvestris BL2 |
| 190 | 3372357 | 3372560 | - | NC_007626.1 | Magnetospirillum magneticum AMB-1 |
| 191 | 467561 | 467761 | + | NZ_CP010855.1 | Marinovum algicola DG 898 |
| 192 | 3562663 | 3562863 | - | NZ_CP041636.1 | Ferrovibrio terrae |
| 193 | 3215638 | 3215811 | - | NZ_CP025086.1 | Methylovirgula ligni |
| 194 | 2634665 | 2634898 | + | NZ_LR214441.1 | Tessaracoccus lapidicaptus |
| 195 | 1122741 | 1122929 | - | NZ_CP022889.1 | Tsuneonella mangrovi |
| 196 | 924963 | 925166 | + | NZ_CP034348.1 | Roseovarius faecimaris |
| 197 | 1424040 | 1424234 | + | NC_011144.1 | Phenylobacterium zucineum HLK1 |
| 198 | 257955 | 258164 | + | NZ_CP012160.1 | Octadecabacter temperatus |
| 199 | 4080426 | 4080635 | - | NZ_CP034588.1 | Silicimonas algicola |
| 200 | 354918 | 355115 | + | NZ_AP019750.1 | Lactobacillus delbrueckii subsp. delbrueckii |
| 201 | 2408481 | 2408687 | - | NC_015186.1 | Acidiphilium multivorum AIU301 |
| 202 | 1889593 | 1889826 | - | NZ_CP019606.1 | Tessaracoccus aquimaris |
| 203 | 326646 | 326843 | + | NZ_CP018799.1 | Mariprofundus aestuarium |
| 204 | 1154855 | 1155076 | + | NC_013523.1 | Sphaerobacter thermophilus DSM 20745 |
| 205 | 496675 | 496875 | + | NC_003911.12 | Ruegeria pomeroyi DSS-3 |
| 206 | 1267216 | 1267425 | + | NZ_CP017057.1 | Erythrobacter litoralis |
| 207 | 1324097 | 1324300 | + | NZ_CP016545.1 | Paraurantiacibacter namhicola |
| 208 | 1762369 | 1762572 | + | NZ_CP022745.1 | Sphingobium xenophagum |
| 209 | 182435 | 182614 | - | NZ_CP014525.1 | Haematospirillum jordaniae |
| 210 | 616379 | 616612 | - | NZ_CP019607.1 | Tessaracoccus flavescens |
| 211 | 4886197 | 4886385 | - | NZ_CP014168.1 | Sphingomonas panacis |
| 212 | 358757 | 358990 | - | NZ_CP032485.1 | Neokomagataea tanensis |
| 213 | 3278513 | 3278716 | - | NZ_CP041025.1 | Paremcibacter congregatus |
| 214 | 3194559 | 3194756 | - | NZ_CP042906.1 | Hypericibacter terrae |
| 215 | 2270539 | 2270745 | - | NZ_CP053921.1 | Erythrobacter mangrovi |
| 216 | 1374865 | 1375059 | - | NZ_CP042304.1 | Devosia ginsengisoli |
| 217 | 2974425 | 2974631 | - | NZ_CP021404.1 | Pacificitalea manganoxidans |
| 218 | 579383 | 579610 | + | NZ_CP013290.1 | Janibacter indicus |
| 219 | 3078565 | 3078765 | - | NZ_CP042345.1 | Novosphingobium ginsenosidimutans |
| 220 | 413766 | 413999 | + | NZ_CP060789.1 | Tessaracoccus defluvii |
| 221 | 209850 | 210053 | - | NZ_CP034179.1 | Caenibius tardaugens NBRC 16725 |
| 222 | 4888301 | 4888504 | + | NZ_CP009429.1 | Sphingopyxis macrogoltabida |
| 223 | 2592892 | 2593095 | - | NZ_CP009571.1 | Sphingomonas taxi |
| 224 | 2401899 | 2402093 | - | NC_014334.2 | Lacticaseibacillus paracasei |
| 225 | 1122614 | 1122823 | + | NZ_CP053015.1 | Sphingomonas lacunae |
| 226 | 2979100 | 2979300 | + | NZ_CP038012.1 | Sporosarcina pasteurii |
| 227 | 4415858 | 4416061 | + | NZ_CP009122.1 | Sphingopyxis fribergensis |
| 228 | 532701 | 532910 | + | NZ_CP011805.1 | Pelagerythrobacter marensis |
| 229 | 345945 | 346151 | - | NZ_CP070511.1 | Parageobacillus toebii |
| 230 | 132214 | 132414 | + | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 231 | 2825866 | 2826066 | + | NZ_CP061470.1 | Geobacillus zalihae |
| 232 | 140921 | 141121 | - | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 233 | 2263947 | 2264147 | - | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 234 | 479266 | 479472 | - | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 235 | 1463258 | 1463470 | + | NZ_CP011310.1 | Aurantiacibacter atlanticus |
| 236 | 231374 | 231580 | - | NZ_CP024920.1 | Qipengyuania seohaensis |
| 237 | 2247123 | 2247320 | + | NZ_AP018449.1 | Methylomusa anaerophila |
| 238 | 1491931 | 1492122 | - | NZ_CP012669.1 | Altererythrobacter epoxidivorans |
| 239 | 2422539 | 2422748 | - | NZ_CP031357.1 | Erythrobacter aureus |
| 240 | 2443035 | 2443229 | - | NZ_AP012544.1 | Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393 |
| 241 | 2442974 | 2443168 | - | NZ_LS991421.1 | Lacticaseibacillus zeae |
| 242 | 1944290 | 1944487 | - | NZ_CP018800.1 | Mariprofundus ferrinatatus |
| 243 | 131256 | 131462 | + | NZ_CP032125.1 | Profundibacter amoris |
| 244 | 218227 | 218427 | + | NZ_CP015230.1 | Epibacterium mobile F1926 |
| 245 | 224366 | 224563 | + | NC_010718.1 | Natranaerobius thermophilus JW/NM-WN-LF |
| 246 | 3096340 | 3096540 | - | NZ_CP014342.1 | Geobacillus subterraneus |
| 247 | 426031 | 426225 | - | NZ_CP018888.1 | Amylolactobacillus amylophilus DSM 20533 = JCM 1125 |
| 248 | 463749 | 463982 | - | NZ_CP068419.1 | Gluconobacter sphaericus |
| 249 | 244239 | 244451 | + | NZ_CP048103.1 | Kroppenstedtia eburnea |
| 250 | 448459 | 448653 | + | NZ_CP012559.1 | Companilactobacillus heilongjiangensis |
| 251 | 2968305 | 2968508 | - | NC_008048.1 | Sphingopyxis alaskensis RB2256 |
| 252 | 434691 | 434891 | + | NZ_CP017560.1 | Sporosarcina ureilytica |
| 253 | 2574412 | 2574612 | - | NZ_CP011361.2 | Salimicrobium jeotgali |
| 254 | 1954950 | 1955183 | - | NZ_CP014689.1 | Gluconobacter albidus |
| 255 | 1446172 | 1446372 | - | NZ_CP012023.1 | Celeribacter marinus |
| 256 | 776751 | 776957 | + | NZ_CP054599.1 | Sulfitobacter pseudonitzschiae |
| 257 | 89677 | 89886 | - | NZ_CP020083.1 | Blastomonas fulva |
| 258 | 2313185 | 2313352 | - | NZ_CP051774.1 | Luteolibacter luteus |
| 259 | 4130937 | 4131137 | - | NZ_CP031223.1 | Psychrobacillus glaciei |
| 260 | 141770 | 141970 | + | NZ_CP042593.1 | Bacillus dafuensis |
| 261 | 1752290 | 1752490 | - | NZ_CP041305.1 | Cytobacillus ciccensis |
| 262 | 2399865 | 2400068 | - | NZ_CP060052.1 | Croceicoccus marinus |
| 263 | 2597758 | 2597964 | - | NZ_CP012908.1 | Ketogulonicigenium vulgare |
| 264 | 1820523 | 1820750 | - | NZ_CP060782.1 | Sphingomonas sediminicola |
| 265 | 190498 | 190683 | - | NZ_CP046314.1 | Gemella morbillorum |
| 266 | 1758715 | 1758900 | - | NZ_LR134484.1 | Gemella haemolysans |
| 267 | 1382318 | 1382524 | + | NZ_CP015963.1 | Altererythrobacter ishigakiensis |
| 268 | 647916 | 648113 | - | NZ_CP048877.1 | Thermosulfuriphilus ammonigenes |
| 269 | 401601 | 401801 | + | NZ_CP016364.1 | Phaeobacter porticola |
| 270 | 3058325 | 3058537 | + | NZ_CP051131.1 | Parasphingopyxis algicola |
| 271 | 483390 | 483560 | - | NZ_CP060780.1 | Sphingomonas daechungensis |
| 272 | 1665065 | 1665256 | + | NZ_CP041694.1 | Cellulosimicrobium cellulans |
| 273 | 1183056 | 1183268 | - | NZ_CP045434.1 | Sphingomonas ginsengisoli An et al. 2013 |
| 274 | 150875 | 151075 | + | NZ_CP009416.1 | Jeotgalibacillus malaysiensis |
| 275 | 1496487 | 1496690 | - | NC_009511.1 | Sphingomonas wittichii RW1 |
| 276 | 628026 | 628220 | + | NZ_CP044499.1 | Lapidilactobacillus dextrinicus |
| 277 | 1673696 | 1673899 | + | NZ_CP023449.1 | Rhizorhabdus dicambivorans |
| 278 | 1534906 | 1535139 | - | NZ_CP042429.1 | Corynebacterium nuruki S6-4 |
| 279 | 1152831 | 1153040 | + | NZ_CP029176.1 | Acidibrevibacterium fodinaquatile |
| 280 | 1400925 | 1401152 | + | NZ_AP022618.1 | Mycolicibacterium insubricum |
| 281 | 3093983 | 3094171 | - | NZ_CP061038.1 | Sphingomonas alpina |
| 282 | 522733 | 522936 | + | NC_006526.2 | Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 |
| 283 | 2152563 | 2152751 | - | NZ_CP012047.1 | Tetragenococcus halophilus |
| 284 | 239759 | 239947 | + | NZ_LS483306.1 | Enterococcus cecorum |
| 285 | 66514 | 66702 | + | NC_020207.1 | Enterococcus faecium ATCC 8459 = NRRL B-2354 |
| 286 | 71014 | 71202 | + | NZ_CP023074.1 | Enterococcus thailandicus |
| 287 | 73621 | 73809 | + | NZ_CP065211.1 | Enterococcus lactis |
| 288 | 2430066 | 2430254 | - | NZ_AP022822.1 | Enterococcus saigonensis |
| 289 | 586054 | 586242 | - | NZ_CP023011.2 | Enterococcus hirae |
| 290 | 3161873 | 3162061 | + | NZ_CP018061.1 | Enterococcus mundtii |
| 291 | 257222 | 257410 | + | NC_020995.1 | Enterococcus casseliflavus EC20 |
| 292 | 2392846 | 2393040 | - | NZ_CP059603.1 | Levilactobacillus suantsaii |
| 293 | 1617034 | 1617216 | + | NZ_LN831039.1 | Mycolicibacterium smegmatis |
| 294 | 6771297 | 6771479 | - | NZ_CP012150.1 | Mycobacterium goodii |
| 295 | 223371 | 223565 | + | NZ_CP045007.1 | Latilactobacillus graminis |
| 296 | 1350349 | 1350543 | - | NZ_CP026116.1 | Latilactobacillus curvatus JCM 1096 = DSM 20019 |
| 297 | 603816 | 604010 | - | NZ_CP046037.1 | Latilactobacillus sakei |
| 298 | 2099865 | 2100062 | + | NZ_CP014912.1 | Secundilactobacillus paracollinoides |
| 299 | 3393952 | 3394146 | - | NZ_AP014936.1 | Sulfurifustis variabilis |
| 300 | 3074540 | 3074752 | - | NZ_CP048104.1 | Kroppenstedtia pulmonis |
| 301 | 1280168 | 1280362 | - | NZ_CP037940.1 | Weissella cryptocerci |
| 302 | 4056954 | 4057133 | - | NZ_CP019066.1 | Tsukamurella tyrosinosolvens |
| 303 | 204585 | 204776 | + | NZ_CP060720.1 | Vagococcus carniphilus |
| 304 | 3516973 | 3517152 | - | NC_014158.1 | Tsukamurella paurometabola DSM 20162 |
| 305 | 3263218 | 3263394 | + | NZ_CP019948.1 | Methylocystis bryophila |
| 306 | 742501 | 742698 | + | NZ_CP017713.1 | Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 |
| 307 | 2251698 | 2251931 | - | NC_021663.1 | Corynebacterium terpenotabidum Y-11 |
| 308 | 1158097 | 1158291 | + | NZ_CP027783.1 | Tetragenococcus osmophilus |
| 309 | 2121222 | 2121413 | - | NZ_CP017267.1 | Vagococcus teuberi |
| 310 | 396321 | 396509 | - | NZ_CP049886.1 | Vagococcus coleopterorum |
| 311 | 367610 | 367807 | + | NZ_CP026948.1 | Corynebacterium liangguodongii |
| 312 | 1326071 | 1326247 | - | NZ_CP013213.1 | Erysipelothrix larvae |
| 313 | 2302305 | 2302496 | - | NZ_LT906453.1 | Dermatophilus congolensis |
| 314 | 2170856 | 2171062 | - | NZ_CP060436.1 | Pseudooceanicola algae |
| 315 | 4405142 | 4405324 | + | NZ_AP022567.1 | Mycolicibacterium mageritense |
| 316 | 195242 | 195436 | - | NZ_CP029971.1 | Lentilactobacillus kefiri |
| 317 | 1792132 | 1792326 | + | NZ_CP018796.1 | Lentilactobacillus parabuchneri |
| 318 | 341536 | 341766 | + | NZ_CP011312.1 | Corynebacterium kutscheri |
| 319 | 2234157 | 2234390 | - | NC_015673.1 | Corynebacterium resistens DSM 45100 |
| 320 | 363532 | 363762 | + | NZ_CP011311.1 | Corynebacterium camporealensis |
| 321 | 474849 | 475079 | + | NZ_LT906467.1 | Corynebacterium imitans |
| 322 | 1242603 | 1242806 | + | NZ_CP060715.1 | Erysipelothrix inopinata |
| 323 | 3992142 | 3992375 | - | NZ_AP024310.1 | Mycobacterium heckeshornense |
| 324 | 5234012 | 5234194 | + | NZ_AP022620.1 | Mycolicibacterium anyangense |
| 325 | 630983 | 631219 | + | NC_014165.1 | Thermobispora bispora DSM 43833 |
| 326 | 1989801 | 1990037 | + | NZ_AP023172.1 | Rhodococcus qingshengii |
| 327 | 523802 | 524002 | + | NZ_CP010522.1 | Liberibacter crescens |
| 328 | 3632450 | 3632680 | - | NZ_CP024633.1 | Mycobacteroides salmoniphilum |
| 329 | 2864598 | 2864822 | - | NZ_CP011502.1 | Aeromicrobium erythreum |
| 330 | 3926869 | 3927099 | - | NZ_AP018165.1 | [Mycobacterium] stephanolepidis |
| 331 | 947627 | 947863 | + | NZ_CP045572.1 | Nonomuraea nitratireducens |
| 332 | 421971 | 422204 | + | NZ_CP008944.1 | Corynebacterium atypicum |
| 333 | 1823437 | 1823628 | + | NZ_CP040863.1 | Rodentibacter heylii |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP071057.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00253.23 | 0.88 | 293 | 1626 | same-strand | Ribosomal protein S14p/S29e |
| 2 | PF00673.23 | 0.92 | 307 | 1024 | same-strand | ribosomal L5P family C-terminus |
| 3 | PF00281.21 | 0.93 | 308 | 1024 | same-strand | Ribosomal protein L5 |
| 4 | PF17136.6 | 0.87 | 290 | 715 | same-strand | Ribosomal proteins 50S L24/mitochondrial 39S L24 |
| 5 | PF00467.31 | 0.85 | 282 | 714 | same-strand | KOW motif |
| 6 | PF00238.21 | 0.94 | 311 | 336.0 | same-strand | Ribosomal protein L14p/L23e |
| 7 | PF00366.22 | 1.0 | 332 | 13 | same-strand | Ribosomal protein S17 |
| 8 | PF00252.20 | 0.98 | 327 | 12.0 | same-strand | Ribosomal protein L16p/L10e |
| 9 | PF00189.22 | 0.98 | 324 | 456 | same-strand | Ribosomal protein S3, C-terminal domain |
| 10 | PF07650.19 | 0.98 | 324 | 456 | same-strand | KH domain |
| 11 | PF00237.21 | 0.97 | 321 | 1175.0 | same-strand | Ribosomal protein L22p/L17e |
| 12 | PF00203.23 | 0.95 | 316 | 1566 | same-strand | Ribosomal protein S19 |
| 13 | PF03947.20 | 0.94 | 311 | 1859.0 | same-strand | Ribosomal Proteins L2, C-terminal domain |
| 14 | PF00181.25 | 0.93 | 310 | 1859 | same-strand | Ribosomal Proteins L2, RNA binding domain |
++ More..