ProsmORF-pred
Result : Q057L5
Protein Information
Information Type Description
Protein name 50S ribosomal protein L32
NCBI Accession ID CP000263.1
Organism Buchnera aphidicola subsp. Cinara cedri (strain Cc)
Left 248531
Right 248716
Strand +
Nucleotide Sequence ATGGCTGTACAAAAAAGTAAGCCTAGTAGGGCAAAAAGAGGAAAAAGAAGGTCTCATGATCATGTAATTCAGCATGCATTATCAATAGATAAATTATCAAAAGAAATACATATTCGACATCATATAACTAAAAAAGGATATTATAAAGGTAAAAAAACATTATTATTTCATTTATTGTCAAAATAA
Sequence MAVQKSKPSRAKRGKRRSHDHVIQHALSIDKLSKEIHIRHHITKKGYYKGKKTLLFHLLSK
Source of smORF Swiss-Prot
Function
Pubmed ID 17038625
Domain
Functional Category Ribosomal_protein
Uniprot ID Q057L5
ORF Length (Amino Acid) 61
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 442
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 371349 371513 + NC_004545.1 Buchnera aphidicola str. Bp (Baizongia pistaciae)
2 1541078 1541248 + NC_013961.1 Erwinia amylovora CFBP1430
3 2287835 2288005 - NC_010694.1 Erwinia tasmaniensis Et1/99
4 1590409 1590579 + NZ_CP023567.1 Erwinia pyrifoliae
5 1523109 1523279 + NZ_CP034148.1 Pantoea agglomerans
6 2597376 2597546 - NZ_CP045720.1 Pantoea eucalypti
7 2510595 2510765 - NZ_CP038853.1 Pantoea vagans
8 4426925 4427095 + NZ_CP049115.1 Pantoea stewartii
9 1558589 1558759 + NZ_LN907827.1 Erwinia gerundensis
10 1858269 1858439 + NC_014306.1 Erwinia billingiae Eb661
11 4140805 4140975 - NZ_CP019706.1 Pantoea alhagi
12 1731201 1731371 + NZ_CP061511.1 Mixta calida
13 1788960 1789130 + NZ_CP026377.1 Mixta gaviniae
14 977722 977892 + NZ_CP028271.1 Mixta intestinalis
15 2886574 2886744 - NC_017554.1 Pantoea ananatis PA13
16 2861064 2861234 - NZ_CP038498.1 Pectobacterium punjabense
17 3068202 3068372 - NZ_CP009125.1 Pectobacterium atrosepticum
18 2991492 2991662 - NZ_CP065044.1 Pectobacterium aroidearum
19 2857724 2857894 - NZ_LT615367.1 Dickeya aquatica
20 1871791 1871961 + NC_012880.1 Musicola paradisiaca Ech703
21 1657339 1657509 + NZ_CP042220.2 Dickeya poaceiphila
22 2904003 2904173 - NZ_CP025799.1 Dickeya zeae
23 1845384 1845554 + NC_012912.1 Dickeya chrysanthemi Ech1591
24 2934655 2934825 - NZ_CP031560.1 Dickeya dianthicola
25 242748 242918 - NZ_CP015137.1 Dickeya solani IPO 2222
26 2997201 2997371 - NC_014500.1 Dickeya dadantii 3937
27 4720577 4720747 + NZ_CP009460.1 Dickeya fangzhongdai
28 4484987 4485157 - NZ_CP047495.1 Pectobacterium brasiliense
29 1897033 1897203 + NZ_CP051652.1 Pectobacterium carotovorum
30 2018759 2018929 + NZ_CP034938.1 Pectobacterium odoriferum
31 1811628 1811798 - NZ_CP017482.1 Pectobacterium polaris
32 1035324 1035494 + NZ_CP015749.1 Pectobacterium parmentieri
33 4799143 4799313 - NZ_CP015750.1 Pectobacterium wasabiae CFBP 3304
34 3076505 3076675 - NZ_CP023525.1 Cedecea neteri
35 2760392 2760562 - NZ_AP023184.1 Buttiauxella agrestis
36 1215561 1215731 + NZ_CP014137.1 Brenneria goodwinii
37 1527856 1528026 + NZ_CP034035.1 Brenneria rubrifaciens
38 1805946 1806116 + NZ_CP034036.1 Brenneria nigrifluens DSM 30175 = ATCC 13028
39 1527048 1527218 + NZ_CP065534.1 Lonsdalea populi
40 2678986 2679156 + NZ_CP023009.1 Lonsdalea britannica
41 1602718 1602888 + NZ_CP015581.1 Tatumella citrea
42 2849951 2850121 - NZ_LR134201.1 Cedecea lapagei
43 2281666 2281836 - NZ_CP013187.1 Pseudoalteromonas phenolica
44 1980180 1980347 - NZ_CP067057.1 Rahnella aceris
45 62044 62211 + NZ_CP011078.1 Yersinia ruckeri
46 1018195 1018362 - NZ_CP009787.1 Yersinia rohdei
47 924990 925157 - NZ_CP009781.1 Yersinia aldovae 670-83
48 3885559 3885726 - NZ_CP054043.1 Yersinia mollaretii ATCC 43969
49 1743019 1743186 + NZ_LR134373.1 Yersinia pseudotuberculosis
50 1927606 1927773 + NZ_CP043727.1 Yersinia canariae
51 1903152 1903319 + NZ_CP011118.1 Yersinia enterocolitica
52 1391167 1391334 + NZ_CP032487.1 Yersinia hibernica
53 4529541 4529708 - NZ_CP007230.1 Yersinia similis
54 2647631 2647798 - NZ_CP046293.1 Yersinia intermedia
55 1991848 1992015 + NZ_LR134494.1 Serratia quinivorans
56 1925304 1925474 + NC_012962.1 Photorhabdus asymbiotica
57 3963233 3963403 + NZ_CP011104.1 Photorhabdus thracensis
58 3366996 3367166 - NC_005126.1 Photorhabdus laumondii subsp. laumondii TTO1
59 1908502 1908672 - NZ_CP022741.1 Vibrio qinghaiensis
60 2111857 2112027 - NZ_CP045350.1 Vibrio aquimaris
61 1367157 1367327 + NZ_CP070624.1 Photobacterium damselae subsp. damselae
62 1829868 1830038 + NZ_CP072455.1 Xenorhabdus budapestensis
63 2882299 2882469 - NZ_CP006569.1 Sodalis praecaptivus
64 1300837 1301007 + NZ_FO704551.1 Xenorhabdus poinarii G6
65 2710970 2711140 + NZ_CP023536.1 Providencia alcalifaciens
66 2650872 2651042 - NZ_FO704550.1 Xenorhabdus doucetiae
67 1996178 1996348 + NZ_CP048796.1 Providencia vermicola
68 3136947 3137117 - NZ_CP029736.1 Providencia rettgeri
69 1956590 1956760 - NZ_CP031123.2 Providencia huaxiensis
70 3076439 3076606 - NZ_CP071320.1 Serratia ureilytica
71 1286707 1286874 + NZ_CP016948.1 Serratia surfactantfaciens
72 1984688 1984855 + NZ_CP038662.1 Serratia nematodiphila
73 3352945 3353115 + NZ_CP040428.1 Jejubacter calystegiae
74 1899562 1899732 - NZ_CP029185.2 Limnobaculum parvum
75 1908272 1908442 + NZ_LR134531.1 Pragia fontium
76 1957350 1957520 - NZ_CP034752.1 Jinshanibacter zhutongyuii
77 228718 228885 - NZ_CP014136.1 Gibbsiella quercinecans
78 809589 809759 - NZ_CP046793.1 Vibrio metschnikovii
79 1505515 1505685 + NZ_CP047349.1 Proteus terrae subsp. cibarius
80 990326 990496 + NZ_CP047475.1 Vibrio astriarenae
81 2052825 2052995 - NZ_CP032093.1 Vibrio alfacsensis
82 1833420 1833590 - NZ_AP019657.1 Vibrio ponticus
83 2222654 2222824 - NZ_CP009354.1 Vibrio tubiashii ATCC 19109
84 3002477 3002647 + NZ_CP026364.1 Proteus hauseri
85 1792186 1792380 + NZ_CP035704.1 Pseudolysobacter antarcticus
86 1912913 1913083 + NC_016041.1 Glaciecola nitratireducens FR1064
87 977692 977862 + NZ_AP018689.1 Vibrio aphrogenes
88 1740374 1740544 - NZ_AP018685.1 Vibrio rumoiensis
89 1648073 1648252 + NZ_CP051183.1 Bermanella marisrubri
90 3447031 3447198 + NZ_CP065640.1 Serratia rubidaea
91 1621289 1621453 - NZ_CP031961.1 Pseudoalteromonas tunicata
92 948022 948192 + NC_010554.1 Proteus mirabilis HI4320
93 2811867 2812037 - NC_013892.1 Xenorhabdus bovienii SS-2004
94 1095469 1095639 + NZ_CP060401.1 Xenorhabdus nematophila
95 1586654 1586824 - NZ_CP016176.1 Xenorhabdus hominickii
96 2034493 2034663 - NZ_LS483470.1 Leminorella richardii
97 1893544 1893714 + NZ_LS483422.1 Providencia heimbachae
98 367351 367521 - NZ_CP065150.1 Vibrio kanaloae
99 1923806 1923976 - NZ_CP016414.1 Vibrio scophthalmi
100 750088 750258 + NZ_CP009977.1 Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
101 1062078 1062248 + NC_011753.2 Vibrio atlanticus
102 1064868 1065038 + NZ_CP039700.1 Vibrio cyclitrophicus
103 2767397 2767567 - NZ_CP045845.1 Kluyvera intermedia
104 1709744 1709917 - NZ_CP027107.1 Cronobacter sakazakii
105 2454703 2454876 - NZ_CP013940.1 Cronobacter malonaticus LMG 23826
106 26012 26185 - NZ_CP042941.1 Atlantibacter hermannii
107 1701379 1701552 + NZ_CP012264.1 Cronobacter condimenti 1330
108 2344026 2344199 - NZ_CP012268.1 Cronobacter muytjensii ATCC 51329
109 1738316 1738489 + NZ_CP012266.1 Cronobacter dublinensis subsp. dublinensis LMG 23823
110 2055000 2055167 + NZ_LT906479.1 Serratia ficaria
111 1970980 1971147 + NZ_CP048784.1 Serratia liquefaciens
112 2002779 2002946 + NC_015567.1 Serratia plymuthica AS9
113 3966805 3966972 - NZ_CP007044.2 Chania multitudinisentens RB-25
114 4333120 4333287 + NZ_CP011254.1 Serratia fonticola
115 980502 980672 + NZ_CP033078.1 Vibrio zhugei
116 1203344 1203514 - NZ_LT960611.1 Vibrio tapetis subsp. tapetis
117 446057 446227 - NZ_CP072133.1 Pseudoalteromonas xiamenensis
118 1277404 1277571 - NZ_CP051883.1 Aeromonas salmonicida
119 2259492 2259659 + NZ_LR134376.1 Aeromonas encheleia
120 965748 965915 - NZ_CP044060.1 Aeromonas veronii
121 1214179 1214346 - NZ_CP065745.1 Aeromonas allosaccharophila
122 2398421 2398588 + NZ_AP022188.1 Aeromonas media
123 2420667 2420834 - NZ_CP050851.1 Aeromonas hydrophila
124 3364758 3364928 - NZ_CP037952.1 Parashewanella spongiae
125 1541172 1541342 + NC_013456.1 Vibrio antiquarius
126 2152823 2152993 - NZ_CP030788.1 Vibrio campbellii
127 1113050 1113220 + NZ_CP031781.1 Vibrio parahaemolyticus
128 918158 918328 + NZ_CP018312.1 Vibrio rotiferianus
129 2993821 2993991 + NZ_CP019959.1 Vibrio owensii
130 2616602 2616772 - NZ_CP009467.1 Vibrio harveyi
131 3480668 3480838 + NZ_CP025792.1 Vibrio jasicida 090810c
132 2937654 2937824 - NZ_CP005974.1 Photobacterium gaetbulicola Gung47
133 1323505 1323675 + NZ_CP044069.1 Vibrio vulnificus
134 3430091 3430261 + NZ_CP021377.1 Oceanisphaera profunda
135 978002 978172 + NZ_AP014635.1 Vibrio tritonius
136 1688693 1688866 + NZ_CP012257.1 Cronobacter universalis NCTC 9529
137 1894257 1894430 + NZ_CP012871.1 [Enterobacter] lignolyticus
138 1124373 1124546 - NZ_CP045300.1 Kosakonia arachidis
139 3281504 3281677 - NZ_CP014007.2 Kosakonia oryzae
140 1916263 1916436 + NZ_CP015113.1 Kosakonia radicincitans
141 1154342 1154515 - NZ_CP016337.1 Kosakonia sacchari
142 1661653 1661832 + NZ_CP013189.1 Pseudohongiella spirulinae
143 1252514 1252708 - NC_004556.1 Xylella fastidiosa Temecula1
144 187622 187792 - NZ_CP052766.1 Alteromonas pelagimontana
145 1703893 1704063 - NZ_CP035688.1 Vibrio metoecus
146 2033693 2033863 - NZ_AP014524.1 Vibrio cholerae MS6
147 1914399 1914572 + NZ_CP063425.1 Kosakonia pseudosacchari
148 2539474 2539647 + NZ_CP051548.1 Phytobacter diazotrophicus
149 1273940 1274113 + NZ_CP011602.1 Phytobacter ursingii
150 1917796 1917966 - NZ_CP020373.1 Shewanella khirikhana
151 1201512 1201682 + NZ_CP071325.1 Photobacterium ganghwense
152 1728395 1728568 + NZ_CP061527.1 Shigella dysenteriae
153 1790309 1790482 + NZ_LR134340.1 Escherichia marmotae
154 3665895 3666068 + NZ_CP053416.1 Salmonella bongori
155 1135084 1135257 + NC_004337.2 Shigella flexneri 2a str. 301
156 1147367 1147540 + NC_000913.3 Escherichia coli str. K-12 substr. MG1655
157 1155463 1155636 + NZ_AP014857.1 Escherichia albertii
158 1838757 1838930 - NC_009792.1 Citrobacter koseri ATCC BAA-895
159 1275836 1276009 + NC_003197.2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
160 3441122 3441295 + NZ_LT556085.1 Citrobacter amalonaticus
161 1243173 1243346 + NC_013716.1 Citrobacter rodentium ICC168
162 3629417 3629590 - NZ_CP045205.1 Citrobacter telavivensis
163 1506603 1506776 + NC_002695.2 Escherichia coli O157:H7 str. Sakai
164 2408044 2408214 + NC_011312.1 Aliivibrio salmonicida LFI1238
165 1204443 1204637 + NZ_LT853882.1 Xanthomonas fragariae
166 2025638 2025808 - NZ_CP032090.1 Pseudoalteromonas donghaensis
167 983850 984020 + NZ_AP019651.1 Vibrio taketomensis
168 1700758 1700925 - NZ_CP011039.1 Pseudoalteromonas spongiae UST010723-006
169 2449489 2449656 - NZ_CP009888.1 Pseudoalteromonas piratica
170 3194282 3194452 - NZ_CP034015.1 Shewanella livingstonensis
171 2466161 2466334 - NC_017910.1 Shimwellia blattae DSM 4481 = NBRC 105725
172 1366805 1366999 + NZ_CP053627.1 Xylella taiwanensis
173 592673 592843 + NZ_CP014035.2 Vibrio fluvialis
174 2736359 2736529 - NZ_CP040990.1 Vibrio furnissii
175 2334785 2334955 - NZ_CP069213.1 Shewanella litorisediminis
176 2412348 2412518 - NC_008700.1 Shewanella amazonensis SB2B
177 2841950 2842123 - NZ_CP035129.1 Kosakonia cowanii
178 1718149 1718316 + NZ_CP040449.1 Aeromonas simiae
179 2104863 2105033 + NC_016901.1 Shewanella baltica OS678
180 1525619 1525783 + NZ_CP072844.1 Psychrosphaera aestuarii
181 1551108 1551281 - NZ_CP038469.1 Citrobacter tructae
182 490599 490772 - NZ_CP044098.1 Citrobacter portucalensis
183 4627432 4627605 + NZ_CP033744.1 Citrobacter freundii
184 2511099 2511269 - NZ_CP046268.1 Vibrio spartinae
185 1286337 1286531 + NZ_CP048044.1 Xanthomonas citri
186 1646468 1646638 - NZ_CP029347.1 Saliniradius amylolyticus
187 1371971 1372150 + NZ_AP014879.1 Sulfuricaulis limicola
188 2770782 2770952 + NZ_CP041660.1 Catenovulum sediminis
189 1008975 1009169 + NZ_CP007810.1 Xanthomonas oryzae pv. oryzicola
190 1010922 1011113 + NZ_CP033326.1 Xanthomonas cucurbitae
191 1269731 1269925 + NZ_CP028127.1 Xanthomonas vasicola pv. vasculorum
192 3670184 3670378 - NZ_CP058243.1 Xanthomonas campestris pv. raphani
193 1301121 1301315 + NZ_CP072268.1 Xanthomonas euvesicatoria pv. alfalfae
194 4303157 4303351 + NZ_CP018725.1 Xanthomonas vesicatoria ATCC 35937
195 2245432 2245626 - NZ_CP016878.1 Xanthomonas hortorum
196 1853561 1853731 + NZ_CP022358.1 Shewanella bicestrii
197 658028 658201 + NZ_CP023529.1 Lelliottia amnigena
198 4265854 4266027 + NZ_AP019007.1 Enterobacter oligotrophicus
199 2777523 2777696 - NZ_CP054058.1 Scandinavium goeteborgense
200 879753 879926 - NZ_CP057657.1 Escherichia fergusonii
201 1777348 1777521 + NZ_AP022508.1 Enterobacter bugandensis
202 1808968 1809141 + NZ_CP027986.1 Enterobacter sichuanensis
203 1742938 1743111 + NZ_CP017184.1 Enterobacter roggenkampii
204 3000163 3000336 - NZ_CP013990.1 Leclercia adecarboxylata
205 1762450 1762623 + NC_015968.1 Enterobacter soli
206 763865 764038 - NZ_CP025034.2 Enterobacter sp. SGAir0187
207 1789723 1789896 + NZ_CP009756.1 Enterobacter cloacae
208 958317 958490 + NZ_CP017279.1 Enterobacter ludwigii
209 1717249 1717422 - NZ_CP045769.1 Enterobacter cancerogenus
210 2012759 2012932 + NZ_CP043318.1 Enterobacter chengduensis
211 3193840 3194013 - NZ_LR134475.1 Klebsiella aerogenes
212 3222113 3222286 - NZ_CP065838.1 Klebsiella quasipneumoniae
213 3262908 3263081 - NZ_CP041247.1 Raoultella electrica
214 2031776 2031949 + NC_016845.1 Klebsiella pneumoniae subsp. pneumoniae HS11286
215 3125157 3125330 + NZ_CP020388.1 Pluralibacter gergoviae
216 3793727 3793900 + NZ_CP026047.1 Raoultella planticola
217 3470388 3470561 - NZ_CP054254.1 Klebsiella variicola
218 3463077 3463250 - NZ_CP046672.1 Raoultella ornithinolytica
219 3577636 3577809 - NZ_CP036175.1 Klebsiella huaxiensis
220 812727 812897 - NZ_CP021376.1 Oceanisphaera avium
221 1786057 1786227 + NC_008345.1 Shewanella frigidimarina NCIMB 400
222 3752934 3753107 - NZ_CP060111.1 Klebsiella michiganensis
223 2091284 2091466 + NZ_CP036422.1 Halioglobus maricola
224 1760980 1761150 + NZ_CP031769.1 Salinimonas sediminis
225 1900236 1900406 - NC_007481.1 Pseudoalteromonas translucida
226 2176226 2176396 - NZ_CP011036.1 Pseudoalteromonas nigrifaciens
227 1961831 1961998 + NZ_CP031416.1 Gallaecimonas mangrovi
228 2721403 2721573 - NC_007954.1 Shewanella denitrificans OS217
229 286686 286856 - NZ_CP036200.1 Shewanella maritima
230 2095367 2095537 + NZ_CP020472.1 Shewanella japonica
231 1016197 1016367 - NZ_LS483250.1 Moritella yayanosii
232 1398166 1398336 + NZ_CP044399.1 Moritella marina ATCC 15381
233 671865 672041 + NZ_CP007030.1 Thiomicrospira aerophila AL3
234 888477 888662 + NZ_CP031222.1 Aquirhabdus parva
235 1745086 1745256 - NZ_CP040021.1 Salinivibrio kushneri
236 3660879 3661061 - NZ_CP060092.1 Teredinibacter purpureus
237 3180054 3180224 - NC_009831.1 Shewanella sediminis HAW-EB3
238 618413 618607 + NZ_CP046570.1 Xanthomonas albilineans
239 2424140 2424310 - NZ_CP036536.1 Salinimonas lutimaris
240 1878882 1879052 + NZ_CP008849.1 Alteromonas australica
241 1765221 1765391 + NZ_CP046670.1 Alteromonas mediterranea
242 1407534 1407704 + NZ_CP011041.1 Pseudoalteromonas tetraodonis
243 1354160 1354330 + NZ_CP011030.1 Pseudoalteromonas issachenkonii
244 2147317 2147487 - NZ_CP027523.1 Pseudoalteromonas carrageenovora
245 2352456 2352626 - NZ_CP011025.1 Pseudoalteromonas arctica A 37-1-2
246 4214366 4214536 - NZ_CP019628.1 Pseudoalteromonas aliena
247 1908948 1909118 + NZ_CP012621.1 Zobellella denitrificans
248 3374607 3374801 + NZ_CP043476.1 Xanthomonas hyacinthi
249 1472230 1472400 + NZ_CP033065.1 Pseudoalteromonas agarivorans
250 2164902 2165072 - NZ_CP023464.1 Pseudoalteromonas atlantica
251 1525454 1525624 + NZ_CP011028.1 Pseudoalteromonas espejiana DSM 9414
252 3136944 3137114 + NZ_CP023706.1 Edwardsiella tarda
253 1451732 1451902 + NZ_CP016043.1 Edwardsiella hoshinae
254 2274400 2274570 - NC_012779.2 Edwardsiella ictaluri 93-146
255 83086 83256 - NZ_CP006664.1 Edwardsiella anguillarum ET080813
256 2715543 2715728 + NZ_CP020038.1 Agarilytica rhodophyticola
257 1600053 1600223 - NZ_CP014322.1 Alteromonas addita
258 2230495 2230665 - NC_015554.1 Alteromonas naphthalenivorans
259 2907372 2907542 - NC_014012.1 Shewanella violacea DSS12
260 759680 759850 + NZ_CP051180.1 Ferrimonas lipolytica
261 3579176 3579349 - NZ_CP050508.1 Raoultella terrigena
262 2075423 2075602 - NC_017857.3 Methylophaga nitratireducenticrescens
263 2165989 2166180 - NZ_CP019650.1 Microbulbifer agarilyticus
264 2480424 2480618 - NZ_CP041242.1 Lysobacter alkalisoli
265 289623 289805 - NZ_CP012505.1 Francisella persica ATCC VR-331
266 592792 592986 + NZ_CP029556.1 Lysobacter oculi
267 83857 84027 - NZ_CP022355.1 Paraphotobacterium marinum
268 3591774 3591956 + NZ_CP019343.1 Oceanicoccus sagamiensis
269 12714 12884 - NZ_CP014056.2 Grimontia hollisae
270 1804610 1804804 - NZ_LN614830.1 Tatlockia micdadei
271 2159009 2159188 - NZ_CP014544.1 Zhongshania aliphaticivorans
272 1015493 1015675 - NC_015696.1 Francisella salina
273 1213311 1213475 + NZ_CP025120.1 Kangiella profundi
274 1564830 1565024 + NZ_CP029843.1 Lysobacter maris
275 716031 716210 + NZ_CP017715.1 Marinobacter salinus
276 379100 379270 + NZ_CP041783.1 Shewanella donghaensis
277 1453590 1453778 - NZ_CP029822.1 Entomomonas moraniae
278 998791 998985 + NZ_LS483377.1 Stenotrophomonas maltophilia
279 1506224 1506394 - NZ_CP014782.1 Shewanella psychrophila
280 1040699 1040893 + NZ_CP037883.1 Stenotrophomonas indicatrix
281 1134739 1134933 + NZ_CP012900.1 Stenotrophomonas acidaminiphila
282 2024242 2024421 - NC_015559.1 Marinomonas posidonica IVIA-Po-181
283 2025574 2025753 + NZ_CP054301.1 Marinomonas primoryensis
284 1592794 1592976 + NZ_CP021781.1 Francisella adeliensis
285 346044 346226 - NZ_CP043552.1 Francisella marina
286 2404775 2404939 - NC_012691.1 Tolumonas auensis DSM 9187
287 2234649 2234843 + NZ_CP060731.1 Pseudoxanthomonas mexicana
288 1832274 1832444 + NC_009092.1 Shewanella loihica PV-4
289 2773932 2774102 - NZ_CP041036.1 Shewanella polaris
290 4007373 4007537 + NZ_CP037953.1 Permianibacter aggregans
291 4102459 4102653 - NZ_AP014940.1 Lysobacter enzymogenes
292 3936320 3936514 - NZ_CP023465.1 Lysobacter capsici
293 2597498 2597668 - NZ_CP022272.1 Shewanella marisflavi
294 2767446 2767616 - NZ_CP046378.1 Shewanella algae
295 1892816 1893013 + NZ_CP011131.1 Lysobacter gummosus
296 2324569 2324751 - NC_016112.1 Methylotuvimicrobium alcaliphilum 20Z
297 2674080 2674259 + NC_017856.1 Methylophaga frappieri
298 4074756 4074950 - NZ_CP011129.1 Lysobacter antibioticus
299 1180185 1180349 + NZ_CP012418.1 Kangiella sediminilitoris
300 2329984 2330175 - NC_016147.2 Pseudoxanthomonas spadix BD-a59
301 2312893 2313075 - NZ_CP035467.1 Methylotuvimicrobium buryatense
302 469476 469658 - NZ_CP022375.1 Francisella opportunistica
303 4416588 4416770 - NC_021505.1 Pseudomonas putida NBRC 14164
304 1564466 1564636 + NC_014541.1 Ferrimonas balearica DSM 9799
305 2625127 2625321 - NZ_CP015249.1 Dokdonella koreensis DS-123
306 665665 665841 + NZ_AP018722.1 Thiomicrorhabdus aquaedulcis
307 10797 10976 + NZ_CP070273.1 Marinomonas foliarum
308 2304245 2304424 - NZ_CP061081.1 Marinomonas arctica
309 1734073 1734243 - NZ_AP021888.1 Thiosulfativibrio zosterae
310 3200503 3200673 - NC_011566.1 Shewanella piezotolerans WP3
311 1192648 1192812 + NZ_CP010975.1 Kangiella geojedonensis
312 2014381 2014563 - NZ_CP060084.1 Teredinibacter haidensis
313 909719 909895 + NZ_CP040602.1 Thiomicrorhabdus sediminis
314 3043524 3043694 - NC_009901.1 Shewanella pealeana ATCC 700345
315 2535379 2535549 - NZ_CP037951.1 Parashewanella tropica
316 2125399 2125569 + NC_010334.1 Shewanella halifaxensis HAW-EB4
317 2244891 2245082 - NZ_CP047491.1 Microbulbifer hydrolyticus
318 1613990 1614169 - NC_007947.1 Methylobacillus flagellatus KT
319 1933811 1933993 + NC_010995.1 Cellvibrio japonicus Ueda107
320 4412319 4412501 - NZ_AP022642.1 Pseudomonas otitidis
321 3194114 3194311 + NC_013960.1 Nitrosococcus halophilus Nc 4
322 1275117 1275281 + NC_013166.1 Kangiella koreensis DSM 16069
323 844095 844286 + NZ_CP045871.1 Litoricola lipolytica
324 375385 375579 + NZ_CP071517.1 Lysobacter arenosi
325 2778253 2778447 - NZ_CP046603.1 Lysobacter soli
326 1921391 1921570 - NZ_AP014936.1 Sulfurifustis variabilis
327 1391018 1391200 + NC_023029.1 Francisella orientalis LADL--07-285A
328 2056487 2056669 + NZ_LR215729.2 Pseudomonas marincola
329 1783988 1784167 + NZ_CP020931.1 Marinobacter salarius
330 863569 863742 + NZ_CP035033.1 Hydrogenovibrio thermophilus
331 1776708 1776890 + NC_004757.1 Nitrosomonas europaea ATCC 19718
332 1442456 1442638 + NC_017449.1 Francisella hispaniensis
333 1554843 1555013 + NZ_AP012273.1 Thiolapillus brandeum
334 4720782 4720976 - NZ_CP017480.1 Luteibacter rhizovicinus DSM 16549
335 2357555 2357728 + NZ_CP028897.1 Dongshaea marina
336 2008563 2008754 - NZ_CP011971.1 Steroidobacter denitrificans
337 1729013 1729186 - NZ_AP020335.1 Hydrogenovibrio marinus
338 1764946 1765125 - NZ_CP011797.1 Reinekea forsetii
339 2581674 2581853 - NZ_CP011494.1 Marinobacter psychrophilus
340 2505898 2506068 + NC_010506.1 Shewanella woodyi ATCC 51908
341 1787934 1788110 - NZ_CP033040.1 Thiomicrorhabdus indica
342 432884 433078 + NC_002971.4 Coxiella burnetii RSA 493
343 406158 406352 - NZ_CP060820.1 Lysobacter solisilvae (ex Woo and Kim 2020)
344 954897 955091 - NZ_CP060711.1 Thermomonas brevis
345 1626878 1627072 - NZ_CP072793.1 Thiothrix unzii
346 1504804 1504998 + NC_017033.1 Frateuria aurantia DSM 6220
347 2839919 2840116 + NZ_CP038033.1 Nitrosococcus wardiae
348 1237011 1237190 + NC_007614.1 Nitrosospira multiformis ATCC 25196
349 543179 543358 - NZ_CP013341.1 Nitrosomonas ureae
350 852054 852233 + NZ_CP011412.1 Sedimenticola thiotaurini
351 1639066 1639245 - NZ_AP018724.1 Sulfurivermis fontis
352 1977591 1977767 - NZ_CP039268.1 Thermochromatium tepidum ATCC 43061
353 2093176 2093361 - NZ_CP046415.1 Guyparkeria halophila
354 1028665 1028841 + NZ_CP054020.1 Thiomicrorhabdus xiamenensis
355 923959 924138 - NC_022664.1 Spiribacter curvatus
356 1601456 1601650 + NZ_CP038254.1 Legionella israelensis
357 3603636 3603815 - NZ_CP011568.3 Pandoraea thiooxydans
358 1798596 1798772 - NZ_AP021889.1 Thiosulfatimonas sediminis
359 2995006 2995200 - NZ_CP041046.1 Luteibacter pinisoli
360 3000825 3001016 - NZ_CP014143.1 Microbulbifer aggregans
361 1536222 1536401 + NC_013959.1 Sideroxydans lithotrophicus ES-1
362 589685 589879 + NZ_CP014841.1 Dyella thiooxydans
363 2740351 2740518 - NZ_CP007445.1 Gilliamella apicola
364 1601067 1601264 - NC_014315.1 Nitrosococcus watsonii C-113
365 1601044 1601238 + NZ_CP064030.1 Dyella caseinilytica
366 834604 834783 - NC_021291.1 Spiribacter salinus M19-40
367 2253205 2253387 - NZ_CP018787.1 Oxalobacter formigenes
368 1836797 1836988 + NZ_CP014864.1 Microbulbifer thermotolerans
369 2172796 2172972 - NC_013851.1 Allochromatium vinosum DSM 180
370 1945240 1945401 + NZ_CP016180.1 Pasteurella skyensis
371 1485760 1485939 + NZ_AP018725.1 Sulfuriflexus mobilis
372 1036535 1036729 + NZ_AP018560.1 Aerosticca soli
373 731697 731876 + NZ_AP018150.1 Mycoavidus cysteinexigens
374 1772309 1772494 + NC_020888.1 Thalassolituus oleivorans MIL-1
375 1574812 1575006 + NC_020541.1 Rhodanobacter denitrificans
376 1146874 1147044 + NC_014532.2 Halomonas elongata DSM 2581
377 1739301 1739495 + NZ_CP023406.1 Luteimonas chenhongjianii
378 1300246 1300422 - NC_015581.1 Thiomicrospira cyclica ALM1
379 1425590 1425787 + NZ_CP016397.1 Legionella clemsonensis
380 1475293 1475463 + NZ_CP015031.1 Basfia succiniciproducens
381 1856232 1856402 + NC_006300.1 [Mannheimia] succiniciproducens MBEL55E
382 332553 332723 - NZ_LR134510.1 Actinobacillus delphinicola
383 161413 161583 + NZ_CP018804.1 Histophilus somni
384 918735 918905 + NZ_CP009610.1 Haemophilus influenzae
385 1893333 1893503 - NZ_LS483458.1 Haemophilus haemolyticus
386 779248 779418 + NZ_LS483443.1 Aggregatibacter segnis ATCC 33393
387 832917 833087 - NZ_LT906463.1 Haemophilus pittmaniae
388 2319476 2319646 - NZ_LR134327.1 Aggregatibacter aphrophilus ATCC 33389
389 2190074 2190244 + NZ_CP040863.1 Rodentibacter heylii
390 1812741 1812911 - NZ_CP016604.1 Otariodibacter oris
391 534996 535187 + NZ_LR134374.1 Legionella spiritensis
392 470854 471024 - NZ_CP015425.1 [Haemophilus] ducreyi
393 882959 883129 - NZ_CP029206.1 Actinobacillus porcitonsillarum
394 1621050 1621220 - NZ_CP030753.1 Actinobacillus pleuropneumoniae
395 2301649 2301819 - NZ_CP007715.1 Actinobacillus equuli subsp. equuli
396 2347994 2348164 - NZ_CP009159.1 Actinobacillus suis ATCC 33415
397 1789037 1789207 - NZ_CP016605.1 Bisgaardia hudsonensis
398 1305987 1306157 + NZ_CP028926.1 Pasteurella multocida
399 145157 145348 - NZ_LR134428.1 Legionella adelaidensis
400 2394232 2394402 + NC_003910.7 Colwellia psychrerythraea 34H
401 1635415 1635585 + NZ_CP017689.1 Thalassotalea crassostreae
402 2277393 2277587 - NZ_CP068345.1 Succinivibrio dextrinosolvens
403 3895050 3895220 - NZ_CP072425.1 Pseudoalteromonas viridis
404 749441 749611 - NZ_CP015029.1 Frederiksenia canicola
405 674989 675159 - NZ_CP046531.1 Mannheimia ovis
406 719644 719814 - NZ_CP055305.1 Mannheimia pernigra
407 1548178 1548369 + NZ_CP013742.1 Legionella pneumophila
408 61851 62021 + NZ_LT906448.1 Pasteurella dagmatis
409 1464089 1464280 + NZ_LT906451.1 Legionella lansingensis
410 1754625 1754816 + NC_013861.1 Legionella longbeachae NSW150
411 1845730 1845921 - NZ_CP025491.2 Legionella sainthelensi
412 366480 366650 + NZ_CP034759.1 Litorilituus sediminis
413 1444376 1444546 - NC_006512.1 Idiomarina loihiensis L2TR
414 1846811 1847002 - NZ_LN681225.1 Legionella hackeliae
415 3986911 3987096 + NZ_CP043929.1 Methylomonas rhizoryzae
416 1162282 1162467 + NC_015572.1 Methylomonas methanica MC09
417 1033861 1034043 - NZ_CP022132.1 Francisella halioticida
418 1577028 1577210 + NZ_CP016796.1 Francisella uliginis
419 1247820 1248002 - NZ_CP038017.1 Allofrancisella frigidaquae
420 1284895 1285077 - NZ_CP010427.1 Allofrancisella guangzhouensis
421 441663 441845 + NZ_CP038241.1 Allofrancisella inopinata
422 955148 955330 - NZ_CP009654.1 Francisella frigiditurris
423 3659954 3660136 - NZ_CP014476.1 Methylomonas denitrificans
424 1633822 1634013 + NZ_LT906442.1 Legionella waltersii
425 4414090 4414260 - NZ_CP020465.1 Cognaticolwellia beringensis
426 1787097 1787279 - NZ_CP011158.1 Moraxella ovis
427 4585966 4586148 + NZ_CP048711.1 Kineobactrum salinum
428 1544591 1544773 - NC_014147.1 Moraxella catarrhalis BBH18
429 128697 128879 - NZ_LR134343.1 Moraxella cuniculi
430 803176 803358 - NC_018868.3 Simiduia agarivorans SA1 = DSM 21679
431 1456162 1456356 + NZ_LN614827.1 Legionella fallonii LLAP-10
432 2193078 2193257 + NC_007645.1 Hahella chejuensis KCTC 2396
433 2555273 2555455 - NZ_CP030241.1 Moraxella bovis
434 3138037 3138222 - NZ_CP019044.1 Salaquimonas pukyongi
435 2140376 2140558 - NZ_CP065728.1 Moraxella nonliquefaciens
436 1271951 1272112 + NC_011852.1 Glaesserella parasuis SH0165
437 873604 873786 - NZ_CP012678.1 Psychrobacter urativorans
438 1254151 1254333 - NZ_LR884459.1 Psychrobacter arenosus
439 840084 840269 + NZ_CP024632.1 Acinetobacter junii
440 2620637 2620822 - NZ_CP030880.1 Acinetobacter haemolyticus
441 2188112 2188297 - NZ_CP041970.1 Acinetobacter dispersus
442 714305 714487 + NZ_CP014945.1 Psychrobacter alimentarius
443 612666 612848 + NC_007204.1 Psychrobacter arcticus 273-4
++ More..
Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_013961.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00849.24 0.64 285 1477.5 same-strand RNA pseudouridylate synthase
2 PF01479.27 0.65 286 1480 same-strand S4 domain
3 PF13561.8 0.96 423 3004 same-strand Enoyl-(Acyl carrier protein) reductase
4 PF00106.27 0.96 423 3004 same-strand short chain dehydrogenase
5 PF08659.12 0.95 422 3004.5 same-strand KR domain
6 PF00550.27 0.94 414 3899.5 same-strand Phosphopantetheine attachment site
7 PF02545.16 0.8 352 699 opposite-strand Maf-like protein
8 PF02620.19 0.95 420 18 same-strand Large ribosomal RNA subunit accumulation protein YceD
9 PF02504.17 0.81 357 30.0 same-strand Fatty acid synthesis protein
10 PF08541.12 0.83 368 1067 same-strand 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
11 PF08545.12 0.83 369 1067.0 same-strand 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
12 PF00698.23 0.86 379 2059.0 same-strand Acyl transferase domain
++ More..