Result : Q04353

Protein Information

• Protein name: Uncharacterized protein CA_C3711
• NCBI Accession ID: AE001437.1
• Organism: Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
• Left: 3917627
• Right: 3917899
• Strand: -
• Nucleotide Sequence: ATGAGCGAACGCATTGATATAAGTATTGAGTTAAATGGGCAACAGTTGGATTTCTGTATTCCCACAGAAATAACGATGGGGCGTTTTACAGAACTCATGCATCAAGTGCTTAAGGGTGGAGTAATGCCCCAAAATTGGACGCTTAAATTGAAGGATAAAAACATAAAAGTTGATGATACTGATTTGATAAAAGAATTGCCAATAGGGAGTGGGGATGTTTTTTGCATTCTTCCCACACAAGAAAGGCAGGAGAATTTGAATGAAAATATCTAA
• Sequence: MSERIDISIELNGQQLDFCIPTEITMGRFTELMHQVLKGGVMPQNWTLKLKDKNIKVDDTDLIKELPIGSGDVFCILPTQERQENLNENI
• Source of smORF: Swiss-Prot
• Pubmed ID: 8501044 11466286
• Functional Category: Others
• Uniprot ID: Q04353
• ORF Length (Amino Acid): 90

Conservation Analysis

No. of Species: 2

Sr.No.	Left Position	Right Position	Strand	NCBI Accession id	Species Name
1	3919209	3919481	-	NC_015687.1	Clostridium acetobutylicum DSM 1731
2	1013372	1013644	-	NZ_CP032627.1	Lactococcus allomyrinae

Neighborhood Conservation Analysis

^* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
^* 'Small ORF' represents the entry/query analyzed.
^* Image generated using 'gggenes'(R-Package).

Neighborhood Representative Chosen(Species): NC_015687.1

Sr.No.	Domain	Co-occurrence Frequency	No. of species in which domain occurs with smORF	Median distance b/w smORF and domain bearing ORFs	Orientation relative to smORF	PFAM Information
1	PF13780.8	1.0	2	5601	same-strand	Domain of unknown function (DUF4176)
2	PF01580.20	1.0	2	1112.0	same-strand	FtsK/SpoIIIE family
3	PF10140.11	1.0	2	-13.0	same-strand	WXG100 protein secretion system (Wss), protein YukC
4	PF06013.14	1.0	2	511.5	same-strand	Proteins of 100 residues with WXG
5	PF18879.2	1.0	2	511.5	same-strand	EspA/EspE family