ProsmORF-pred
Result : Q03ER9
Protein Information
Information Type Description
Protein name UPF0297 protein PEPE_1262
NCBI Accession ID CP000422.1
Organism Pediococcus pentosaceus (strain ATCC 25745 / CCUG 21536 / LMG 10740 / 183-1w)
Left 1247280
Right 1247561
Strand -
Nucleotide Sequence GTGGGAAAACTTGATGAAACAATGTTCTTTGACTTTGGCGATAATAAGCAAAACGATGTCAGAGAAACTTTAAAAACAGTCTACGATGCTCTTGAAGAGAAGGGATATAACCCTATTGATCAGATCGTTGGTTATTTAATTTCAGGTGATCCGGCATACATTCCACGGTTGAATGATGCTCGTAATTTGATTCGGAAACATCAGCGCGATGAGATTATCGAAGAACTCGTTCGATACTATCTATCTGAACAAATCGCTGATAGCAAAAAGGAAGAAAATTAA
Sequence MGKLDETMFFDFGDNKQNDVRETLKTVYDALEEKGYNPIDQIVGYLISGDPAYIPRLNDARNLIRKHQRDEIIEELVRYYLSEQIADSKKEEN
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl01857. Profile Description: Bacterial protein of unknown function (DUF965). IreB (EF1202) was characterized in Enterococcus faecalis as a small protein, well-conserved in the Firmicutes. It belongs to a system that includes the Ser/Thr protein kinase IreK, and phosphatase IreP, undergoes phosphorylation on threonine residues, and is involved in regulating cephalosporin resistance. This family was previously named DUF965 by Pfam model pfam06135
Pubmed ID 17030793
Domain CDD:413096
Functional Category Others
Uniprot ID Q03ER9
ORF Length (Amino Acid) 93
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 468
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 1247280 1247561 - NC_008525.1 Pediococcus pentosaceus ATCC 25745
2 1354596 1354877 - NZ_CP053421.1 Pediococcus acidilactici
3 744140 744421 + NC_016605.1 Pediococcus claussenii ATCC BAA-344
4 571455 571754 - NZ_CP012294.1 Pediococcus damnosus
5 1212329 1212628 - NZ_CP019981.1 Pediococcus inopinatus
6 3108074 3108343 - NZ_CP014912.1 Secundilactobacillus paracollinoides
7 611794 612039 + NZ_CP044534.1 Limosilactobacillus frumenti
8 1478188 1478430 - NZ_AP014680.1 Paucilactobacillus hokkaidonensis JCM 18461
9 2279561 2279833 - NZ_CP059603.1 Levilactobacillus suantsaii
10 1094257 1094517 - NZ_CP011403.1 Ligilactobacillus salivarius str. Ren
11 573457 573702 + NZ_CP045240.1 Limosilactobacillus vaginalis
12 608088 608354 + NZ_CP045605.1 Limosilactobacillus reuteri
13 631191 631454 + NZ_CP018180.1 Liquorilactobacillus nagelii
14 1266644 1266886 - NZ_LN898144.1 Paucilactobacillus oligofermentans DSM 15707 = LMG 22743
15 628308 628571 + NZ_CP047141.1 Ligilactobacillus animalis
16 468366 468617 - NZ_CP037940.1 Weissella cryptocerci
17 1888416 1888682 - NZ_CP040586.1 Furfurilactobacillus rossiae
18 915008 915280 + NZ_LS483405.1 Levilactobacillus brevis
19 115938 116210 - NZ_CP012033.1 Levilactobacillus koreensis
20 2558676 2558957 - NZ_CP018796.1 Lentilactobacillus parabuchneri
21 2018718 2018996 - NZ_CP018906.1 Lentilactobacillus curieae
22 1492056 1492337 + NZ_CP047121.1 Lentilactobacillus hilgardii
23 735584 735844 + NC_014334.2 Lacticaseibacillus paracasei
24 596630 596890 + NZ_AP012544.1 Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393
25 2308022 2308291 - NZ_CP032757.1 Lactiplantibacillus pentosus
26 1741462 1741731 + NZ_CP042371.1 Secundilactobacillus malefermentans
27 1840703 1840972 - NZ_CP016843.1 Carnobacterium divergens
28 705279 705539 + NZ_LS991421.1 Lacticaseibacillus zeae
29 1908344 1908640 + NZ_CP029971.1 Lentilactobacillus kefiri
30 584605 584850 + NZ_CP045530.1 Limosilactobacillus pontis
31 1694439 1694708 - NZ_CP030105.1 Lactiplantibacillus plantarum
32 593532 593789 + NZ_CP017996.1 Companilactobacillus crustorum
33 1545603 1545860 - NZ_CP049366.1 Companilactobacillus pabuli
34 24635 24892 - NZ_CP019323.1 Companilactobacillus allii
35 1925193 1925450 - NZ_CP017702.1 Companilactobacillus farciminis KCTC 3681 = DSM 20184
36 1849363 1849620 - NZ_CP040736.1 Companilactobacillus futsaii
37 903564 903821 - NZ_CP012034.1 Companilactobacillus ginsenosidimutans
38 613634 613891 + NZ_CP012559.1 Companilactobacillus heilongjiangensis
39 1195172 1195432 - NZ_CP041364.1 Schleiferilactobacillus harbinensis
40 1355882 1356139 - NZ_CP024610.1 Lactobacillus terrae
41 1117583 1117852 - NZ_CP021874.1 Enterococcus wangshanyuanii
42 236918 237190 + NZ_CP031513.1 Bombilactobacillus bombi
43 1135907 1136179 - NZ_CP014324.1 Oenococcus oeni
44 1458745 1459002 - NZ_CP044499.1 Lapidilactobacillus dextrinicus
45 1954358 1954615 - NZ_CP017713.1 Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001
46 1488175 1488435 - NZ_CP045007.1 Latilactobacillus graminis
47 1846290 1846550 + NZ_CP026116.1 Latilactobacillus curvatus JCM 1096 = DSM 20019
48 351991 352248 + NZ_CP031835.1 Lactobacillus amylolyticus
49 454027 454284 + NZ_CP029544.1 Lactobacillus helsingborgensis
50 446646 446903 + NZ_CP029477.1 Lactobacillus kullabergensis
51 1553457 1553726 + NZ_CP049887.1 Vagococcus hydrophili
52 879780 880031 + NZ_CP027563.1 Weissella confusa
53 335648 335905 + NZ_CP029476.1 Lactobacillus apis
54 1225827 1226078 - NZ_CP042410.1 Leuconostoc citreum
55 1389577 1389828 - NC_018631.1 Leuconostoc gelidum JB7
56 467595 467852 + NZ_CP044496.1 Lactobacillus acetotolerans
57 396045 396302 + NC_021181.2 Lactobacillus acidophilus La-14
58 514384 514641 + NZ_CP059829.1 Lactobacillus ultunensis
59 34542 34817 - NZ_CP029684.2 Oenococcus sicerae
60 1427178 1427435 - NZ_CP015444.1 Lactobacillus helveticus
61 464467 464724 + NZ_CP061341.1 Lactobacillus kefiranofaciens
62 294241 294498 - NZ_CP018888.1 Amylolactobacillus amylophilus DSM 20533 = JCM 1125
63 1377334 1377591 - NZ_AP019750.1 Lactobacillus delbrueckii subsp. delbrueckii
64 644177 644428 + NZ_CP065993.1 Leuconostoc pseudomesenteroides
65 510797 511048 - NC_014136.1 Leuconostoc kimchii IMSNU 11154
66 1196332 1196592 + NZ_CP046037.1 Latilactobacillus sakei
67 745440 745709 + NZ_LS483306.1 Enterococcus cecorum
68 1174860 1175111 - NZ_CP028251.1 Leuconostoc mesenteroides
69 519564 519815 + NZ_CP015247.1 Leuconostoc suionicum
70 2650237 2650503 - NC_020995.1 Enterococcus casseliflavus EC20
71 489260 489517 + NZ_CP059276.1 Lactobacillus taiwanensis
72 451656 451913 + NC_008530.1 Lactobacillus gasseri ATCC 33323 = JCM 1131
73 450047 450304 + NZ_AP018549.1 Lactobacillus paragasseri
74 873462 873734 - NZ_CP032626.1 Apilactobacillus bombintestini
75 1423673 1423930 - NZ_CP018809.1 Lactobacillus jensenii
76 1426835 1427086 + NZ_CP042374.1 Leuconostoc carnosum
77 2397241 2397510 + NZ_CP034465.1 Jeotgalibaca ciconiae
78 2723471 2723737 - NZ_CP060720.1 Vagococcus carniphilus
79 494564 494833 + NZ_CP017267.1 Vagococcus teuberi
80 1941968 1942234 - NZ_AP022822.1 Enterococcus saigonensis
81 90112 90378 - NZ_CP027783.1 Tetragenococcus osmophilus
82 1527273 1527539 - NZ_CP012047.1 Tetragenococcus halophilus
83 1900007 1900276 + NZ_CP049740.1 Jeotgalibaca arthritidis
84 552220 552486 + NZ_CP023074.1 Enterococcus thailandicus
85 1093725 1093985 + NZ_CP023434.1 Suicoccus acidiformans
86 505962 506213 + NZ_CP023501.1 Weissella paramesenteroides
87 1317916 1318167 - NZ_CP014332.1 Weissella jogaejeotgali
88 126291 126557 - NZ_CP049886.1 Vagococcus coleopterorum
89 1322873 1323136 - NZ_CP013988.1 Aerococcus urinaeequi
90 869058 869321 + NZ_CP014164.1 Aerococcus viridans
91 1549871 1550134 - NZ_CP039712.1 Vagococcus zengguangii
92 1531820 1532062 + NZ_CP014163.1 Aerococcus urinaehominis
93 1698127 1698396 - NZ_LS483403.1 Streptococcus lutetiensis
94 2057374 2057643 - NZ_CP039457.1 Streptococcus pasteurianus
95 735686 735955 - NZ_CP054015.1 Streptococcus gallolyticus
96 2013616 2013885 - NZ_CP014699.1 Streptococcus pantholopis
97 2353846 2354115 - NZ_CP031733.1 Streptococcus chenjunshii
98 470058 470324 - NZ_CP049889.1 Jeotgalibaca porci
99 2056583 2056849 - NZ_AP021853.1 Sporolactobacillus terrae
100 1725291 1725557 + NC_014829.1 Evansella cellulosilytica DSM 2522
101 692932 693198 + NC_020207.1 Enterococcus faecium ATCC 8459 = NRRL B-2354
102 770578 770844 + NZ_CP065211.1 Enterococcus lactis
103 2164952 2165218 - NZ_CP018061.1 Enterococcus mundtii
104 1456389 1456661 - NZ_LR134483.1 Listeria grayi
105 1056481 1056744 - NZ_CP014161.1 Aerococcus urinae
106 1885543 1885812 - NZ_LR594050.1 Streptococcus porcinus
107 1300828 1301097 + NZ_LR134341.1 Streptococcus pseudoporcinus
108 2193610 2193876 - NZ_CP064060.1 Anoxybacillus caldiproteolyticus
109 1251208 1251480 + NZ_CP012502.1 Bacillus beveridgei
110 69564 69830 + NC_012924.1 Streptococcus suis SC84
111 1669987 1670256 + NZ_CP013237.1 Streptococcus mutans
112 2018082 2018351 - NZ_AP014612.1 Streptococcus troglodytae
113 2019351 2019617 - NZ_CP012152.1 Anoxybacillus gonensis
114 499131 499397 + NZ_CP019728.1 Jeotgalibaca dankookensis
115 1353900 1354166 + NZ_CP023011.2 Enterococcus hirae
116 1444640 1444903 + NZ_CP014159.1 Aerococcus christensenii
117 1354388 1354654 + NZ_CP018058.1 Geobacillus thermocatenulatus
118 2097228 2097494 - NZ_CP009416.1 Jeotgalibacillus malaysiensis
119 676654 676902 + NZ_CP061835.1 Weissella viridescens
120 1944536 1944802 - NZ_LR134512.1 Streptococcus agalactiae
121 2293104 2293370 - NZ_CP024848.1 Oceanobacillus zhaokaii
122 2023844 2024113 - NC_010556.1 Exiguobacterium sibiricum 255-15
123 1870083 1870349 + NC_017581.1 Streptococcus thermophilus JIM 8232
124 3579720 3579986 - NZ_CP053989.1 Niallia circulans
125 672984 673253 + NZ_LR134293.1 Streptococcus canis
126 2093680 2093949 - NZ_LR594046.1 Streptococcus dysgalactiae
127 3398291 3398560 + NZ_CP018622.1 Virgibacillus dokdonensis
128 2031732 2031998 + NZ_LT906439.1 Streptococcus merionis
129 715527 715793 + NZ_CP014342.1 Geobacillus subterraneus
130 1948142 1948411 - NZ_CP065061.1 Streptococcus equi subsp. zooepidemicus
131 1802403 1802672 - NZ_LS483343.1 Streptococcus ferus
132 491870 492139 - NZ_CP043405.1 Streptococcus ratti
133 1705542 1705811 - NZ_CP010450.1 Streptococcus pyogenes
134 1804988 1805254 - NZ_LS483436.1 Streptococcus intermedius
135 2030853 2031122 - NC_004193.1 Oceanobacillus iheyensis HTE831
136 1343921 1344187 + NZ_CP011937.1 Bacillus velezensis
137 1784656 1784922 - NZ_CP034543.1 Streptococcus periodonticum
138 1827314 1827580 - NZ_CP012805.1 Streptococcus anginosus
139 70147 70413 + NZ_AP018400.1 Streptococcus ruminantium
140 2323094 2323357 - NZ_CP012024.1 Bacillus smithii
141 1933785 1934048 + NZ_CP022437.1 Virgibacillus necropolis
142 174824 175090 - NZ_CP063356.1 Anaerobacillus isosaccharinicus
143 2608394 2608660 - NZ_CP034943.1 Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499
144 2630531 2630797 - NZ_CP013984.1 Bacillus inaquosorum
145 2797823 2798089 - NC_000964.3 Bacillus subtilis subsp. subtilis str. 168
146 25812 26078 + NZ_CP025536.1 Streptococcus pluranimalium
147 2681448 2681714 - NZ_CP033052.1 Bacillus vallismortis
148 1878493 1878759 + NZ_LR134275.1 Streptococcus vestibularis
149 4362889 4363158 - NZ_CP024035.1 Priestia aryabhattai
150 2106626 2106892 - NZ_LR594049.1 Streptococcus gordonii
151 2643849 2644115 - NZ_CP053376.1 Bacillus amyloliquefaciens
152 2616109 2616375 - NZ_CP048852.1 Bacillus tequilensis
153 2534084 2534350 - NZ_CP051464.1 Bacillus mojavensis
154 3499539 3499805 + NZ_CP029364.1 Bacillus halotolerans
155 2844874 2845137 + NZ_CP022315.1 Virgibacillus phasianinus
156 1392340 1392606 + NZ_CP070511.1 Parageobacillus toebii
157 814844 815116 + NC_013791.2 Alkalihalobacillus pseudofirmus OF4
158 2419301 2419567 - NZ_CP011150.1 Bacillus altitudinis
159 1535391 1535657 - NZ_CP014835.1 Streptococcus halotolerans
160 1160645 1160914 - NZ_CP013862.1 Lentibacillus amyloliquefaciens
161 332848 333099 + NZ_CP017326.1 Weissella soli
162 819506 819778 - NZ_CP009709.1 Weizmannia coagulans DSM 1 = ATCC 7050
163 1509240 1509512 - NZ_LT906444.1 Listeria welshimeri
164 1778431 1778697 - NZ_CP040676.1 Exiguobacterium mexicanum
165 3488092 3488358 - NZ_CP016622.1 Parageobacillus thermoglucosidasius
166 3849831 3850097 - NZ_CP017703.1 Aeribacillus pallidus
167 648541 648807 + NZ_CP032620.1 Streptococcus koreensis
168 2755856 2756122 - NC_006270.3 Bacillus licheniformis DSM 13 = ATCC 14580
169 2946559 2946825 - NZ_CP023665.1 Bacillus paralicheniformis
170 1842832 1843107 + NZ_CP009286.1 Paenibacillus stellifer
171 1616084 1616350 + NZ_CP017962.1 Virgibacillus halodenitrificans
172 1444729 1445001 - NC_013891.1 Listeria seeligeri serovar 1/2b str. SLCC3954
173 1566232 1566504 - NZ_CP009577.1 Listeria ivanovii subsp. ivanovii
174 1532129 1532401 - NC_003210.1 Listeria monocytogenes EGD-e
175 720098 720364 + NZ_CP016953.1 Streptococcus himalayensis
176 1769239 1769505 - NZ_LR134336.1 Streptococcus oralis ATCC 35037
177 1886415 1886681 - NZ_LS483383.1 Streptococcus cristatus ATCC 51100
178 1914096 1914347 - NZ_CP011102.1 Listeria weihenstephanensis
179 1955134 1955400 + NZ_CP032621.1 Streptococcus gwangjuense
180 279565 279831 + NC_015875.1 Streptococcus pseudopneumoniae IS7493
181 1930209 1930484 + NZ_CP009288.1 Paenibacillus durus
182 2971221 2971487 + NZ_CP017786.1 Bacillus xiamenensis
183 2335427 2335693 - NZ_CP029797.1 Paraliobacillus zengyii
184 2885179 2885445 + NZ_CP043404.1 Bacillus safensis
185 2569719 2569991 - NC_017668.1 Halobacillus halophilus DSM 2266
186 2068616 2068882 - NZ_CP029491.1 Streptococcus sobrinus
187 2063147 2063425 - NZ_CP029491.1 Streptococcus sobrinus
188 3090604 3090870 - NZ_LT603683.1 Bacillus glycinifermentans
189 681955 682221 - NZ_CP015196.1 Streptococcus marmotae
190 100855 101121 + NZ_CP022680.1 Streptococcus respiraculi
191 2566796 2567062 - NC_006510.1 Geobacillus kaustophilus HTA426
192 1769916 1770182 - NZ_CP061470.1 Geobacillus zalihae
193 3368564 3368830 + NZ_CP061472.1 Geobacillus thermoleovorans
194 1256245 1256505 + NZ_CP016020.1 Bacillus weihaiensis
195 3178699 3178965 - NZ_CP018866.1 Sutcliffiella cohnii
196 1365832 1366104 + NC_002570.2 Alkalihalobacillus halodurans C-125
197 2656663 2656926 - NZ_CP015438.1 Anoxybacillus amylolyticus
198 3416884 3417150 - NC_022524.1 Bacillus infantis NRRL B-14911
199 3999286 3999555 + NZ_CP068053.1 Peribacillus psychrosaccharolyticus
200 2603473 2603733 + NZ_CP034235.1 Paenibacillus psychroresistens
201 1831770 1832033 - NZ_CP008876.1 Terribacillus goriensis
202 1947760 1948008 - NZ_CP034118.1 Staphylospora marina
203 2577023 2577292 - NZ_CP023704.1 Caldibacillus thermoamylovorans
204 3136320 3136586 - NZ_CP024109.1 Bacillus cytotoxicus
205 2839534 2839809 - NZ_CP015378.1 Fictibacillus phosphorivorans
206 1752071 1752346 + NZ_CP004078.1 Paenibacillus sabinae T27
207 1697748 1698008 - NZ_CP045295.1 Paenibacillus cellulositrophicus
208 5060094 5060354 - NZ_CP034346.1 Paenibacillus lutimineralis
209 107231 107488 - NZ_CP053988.1 Abiotrophia defectiva
210 3310946 3311212 + NZ_CP041305.1 Cytobacillus ciccensis
211 3460190 3460456 - NZ_CP042593.1 Bacillus dafuensis
212 4001695 4001955 + NZ_CP011058.1 Paenibacillus beijingensis
213 5285119 5285379 - NZ_CP026520.1 Paenibacillus chitinolyticus
214 4227271 4227537 - NZ_CP064875.1 Bacillus toyonensis
215 1876943 1877206 + NZ_CP020772.1 Halobacillus mangrovi
216 783564 783833 - NZ_CP030926.1 Peribacillus butanolivorans
217 4376738 4377007 + NZ_CP017704.1 Peribacillus simplex NBRC 15720 = DSM 1321
218 927970 928227 - NZ_CP041217.1 Saccharibacillus brassicae
219 4501493 4501756 - NZ_CP048209.1 Paenibacillus lycopersici
220 6231193 6231453 + NZ_CP048286.1 Paenibacillus rhizovicinus
221 3121718 3121984 - NZ_CP006837.1 Lysinibacillus varians
222 1532670 1532936 + NZ_CP019980.1 Lysinibacillus sphaericus
223 1006655 1006921 + NZ_CP040336.1 Bacillus luti
224 872180 872440 - NZ_CP045298.1 Paenibacillus brasilensis
225 1453862 1454122 + NZ_CP020028.1 Paenibacillus kribbensis
226 1538857 1539123 + NZ_CP010820.1 Lysinibacillus fusiformis
227 3680564 3680833 + NZ_CP035485.1 Salicibibacter halophilus
228 3418157 3418423 + NZ_CP022983.1 Cytobacillus kochii
229 1447450 1447716 + NZ_CP016537.2 Planococcus halocryophilus
230 1204641 1204904 + NZ_AP017312.1 Aneurinibacillus soli
231 4192302 4192568 - NC_007530.2 Bacillus anthracis str. 'Ames Ancestor'
232 4363544 4363810 - NC_011725.1 Bacillus cereus B4264
233 4402093 4402359 - NZ_CP032365.1 Bacillus wiedmannii
234 1566408 1566677 + NZ_CP065425.1 Heyndrickxia vini
235 1477118 1477384 + NZ_CP016539.2 Planococcus plakortidis
236 3055682 3055945 - NZ_CP019659.1 Paenibacillus larvae subsp. larvae
237 751322 751585 + NZ_AP019308.1 Paenibacillus baekrokdamisoli
238 1049256 1049516 + NZ_CP019699.1 Novibacillus thermophilus
239 1441356 1441622 + NZ_CP016538.2 Planococcus maritimus
240 1450763 1451029 + NZ_CP059540.1 Planococcus maritimus
241 1194184 1194450 + NZ_CP013659.2 Planococcus rifietoensis
242 828524 828799 + NZ_CP021780.1 Paenibacillus donghaensis
243 2265357 2265623 + NZ_CP032627.1 Lactococcus allomyrinae
244 1335524 1335790 + NZ_CP038015.1 Paenisporosarcina antarctica
245 2890009 2890269 - NZ_CP014167.1 Paenibacillus yonginensis
246 6016483 6016734 - NC_016641.1 Paenibacillus terrae HPL-003
247 1328144 1328410 + NZ_CP023392.1 Lactococcus raffinolactis
248 1066190 1066462 + NZ_CP011361.2 Salimicrobium jeotgali
249 1855041 1855307 - NZ_CP017194.1 Lactococcus carnosus
250 279968 280234 + NZ_CP017195.1 Lactococcus paracarnosus
251 2392293 2392553 + NZ_CP034248.1 Paenibacillus lentus
252 3204806 3205069 + NZ_CP011388.1 Paenibacillus swuensis
253 321909 322175 + NZ_CP070872.1 Lactococcus taiwanensis
254 2295523 2295798 + NZ_CP009285.1 Paenibacillus borealis
255 2727649 2727912 - NZ_CP013652.1 Paenibacillus naphthalenovorans
256 1414553 1414819 + NZ_CP016540.2 Planococcus versutus
257 1566025 1566291 + NZ_CP016534.2 Planococcus antarcticus DSM 14505
258 2133319 2133591 - NZ_CP017560.1 Sporosarcina ureilytica
259 1392657 1392923 + NZ_CP016543.2 Planococcus donghaensis
260 2270354 2270614 - NZ_CP054614.1 Paenibacillus barcinonensis
261 4110101 4110376 + NZ_CP048429.1 Paenibacillus jilunlii
262 2206090 2206365 + NZ_CP009287.1 Paenibacillus graminis
263 4117005 4117280 + NZ_CP068595.1 Paenibacillus sonchi
264 2422942 2423217 + NZ_LN831776.1 Paenibacillus riograndensis SBR5
265 3314698 3314970 + NZ_CP015108.1 Sporosarcina ureae
266 1518501 1518761 - NZ_CP016809.1 Paenibacillus ihbetae
267 2094724 2094990 - NZ_CP041666.1 Radiobacillus deserti
268 5035170 5035433 - NZ_CP034437.1 Paenibacillus albus
269 900791 901048 + NZ_CP039710.1 Thermoactinomyces vulgaris
270 294923 295189 - NZ_CP013661.2 Planococcus kocurii
271 1487917 1488183 + NZ_CP019401.1 Planococcus faecalis
272 1831910 1832185 + NZ_CP009428.1 Paenibacillus odorifer
273 456905 457165 + NZ_CP018199.1 Staphylococcus succinus
274 3637364 3637633 + NZ_CP031092.1 Salicibibacter kimchii
275 120316 120582 + NC_022369.1 Lactococcus lactis subsp. cremoris KW2
276 1636476 1636742 + NZ_LS483476.1 Lederbergia lentus
277 7209089 7209352 - NC_017672.3 Paenibacillus mucilaginosus K02
278 1336062 1336325 + NZ_CP011366.1 Salinicoccus halodurans
279 1135465 1135734 - NZ_CP068061.1 Mammaliicoccus vitulinus
280 1349915 1350187 - NZ_CP038012.1 Sporosarcina pasteurii
281 1122435 1122701 + NC_018704.1 Amphibacillus xylanus NBRC 15112
282 1113786 1114061 + NZ_LT906462.1 Mammaliicoccus stepanovicii
283 2570519 2570785 - NZ_CP031223.1 Psychrobacillus glaciei
284 2488118 2488372 - NZ_CP048104.1 Kroppenstedtia pulmonis
285 2033023 2033292 + NZ_CP023643.1 Brochothrix thermosphacta
286 282300 282563 + NZ_CP035492.1 Paenibacillus protaetiae
287 4649144 4649395 - NZ_CP013023.1 Paenibacillus bovis
288 1698877 1699113 - NC_018870.1 Thermacetogenium phaeum DSM 12270
289 1022421 1022690 + NZ_CP022046.2 Mammaliicoccus sciuri
290 4193075 4193335 - NZ_LR134338.1 Brevibacillus brevis
291 1488562 1488822 - NZ_CP013114.1 Staphylococcus equorum
292 1877390 1877662 + NZ_CP014616.1 Sporosarcina psychrophila
293 4900238 4900498 - NZ_CP043611.1 Paenibacillus antarcticus
294 1105931 1106185 + NZ_CP065712.1 Staphylococcus auricularis
295 1271450 1271692 + NZ_CP064056.1 Staphylococcus lloydii
296 1286453 1286680 + NC_014410.1 Thermoanaerobacterium thermosaccharolyticum DSM 571
297 3950251 3950511 - NZ_CP026363.1 Brevibacillus agri
298 1301160 1301420 + NZ_CP008724.1 Staphylococcus xylosus
299 1689527 1689787 - NZ_LR134304.1 Staphylococcus schweitzeri
300 1624936 1625196 - NC_007795.1 Staphylococcus aureus subsp. aureus NCTC 8325
301 1611822 1612082 - NZ_LT906460.1 Staphylococcus simiae
302 2329695 2329949 - NC_020134.1 Thermoclostridium stercorarium subsp. stercorarium DSM 8532
303 2587915 2588154 - NC_019897.1 Thermobacillus composti KWC4
304 1062477 1062752 + NZ_LT906464.1 Staphylococcus muscae
305 1224212 1224472 + NZ_LR134089.1 Staphylococcus saprophyticus
306 235792 236058 - NZ_CP065637.1 Lactococcus garvieae
307 543748 544011 - NZ_CP022096.2 Staphylococcus pettenkoferi
308 924045 924293 + NZ_CP068564.1 Keratinibaculum paraultunense
309 1434624 1434869 - NZ_CP047361.1 Macrococcus canis
310 310779 311024 + NZ_CP065729.1 Macrococcus caseolyticus
311 3926089 3926319 + NZ_AP018449.1 Methylomusa anaerophila
312 1316607 1316867 + NZ_AP018587.1 Staphylococcus caprae
313 1424865 1425137 - NC_014925.1 Staphylococcus pseudintermedius HKU10-03
314 3614256 3614510 + NZ_CP017705.1 Brevibacillus laterosporus DSM 25
315 4697868 4698143 - NZ_AP019400.1 Cohnella abietis
316 2582093 2582335 - NZ_CP025197.1 Acetivibrio saccincola
317 186054 186314 + NZ_CP014022.1 Staphylococcus lugdunensis
318 74200 74472 - NZ_CP020773.1 Staphylococcus lutrae
319 1387599 1387847 + NC_016627.1 Acetivibrio clariflavus DSM 19732
320 2083442 2083702 - NZ_CP066042.1 Staphylococcus saccharolyticus
321 2452582 2452833 - NZ_CP016502.1 Acetivibrio thermocellus DSM 2360
322 2459054 2459290 + NZ_CP059066.1 Koleobacter methoxysyntrophicus
323 1216702 1216962 + NZ_LR134242.1 Staphylococcus warneri
324 716445 716693 + NZ_CP033433.1 Cohnella candidum
325 942341 942601 - NZ_CP007601.1 Staphylococcus capitis subsp. capitis
326 1409681 1409944 + NZ_CP018776.1 Staphylococcus condimenti
327 455230 455493 + NC_014378.1 Acetohalobium arabaticum DSM 5501
328 1229939 1230211 - NZ_CP045927.1 Staphylococcus agnetis
329 1326209 1326481 + NZ_CP008747.1 Staphylococcus hyicus
330 1964262 1964522 + NZ_CP033732.1 Staphylococcus hominis
331 1240046 1240315 + NZ_CP061336.1 Ruminiclostridium herbifermentans
332 2776205 2776432 - NZ_CP022121.1 Dehalobacterium formicoaceticum
333 2272588 2272821 - NC_008261.1 Clostridium perfringens ATCC 13124
334 1684523 1684786 - NZ_CP033460.1 Staphylococcus debuckii
335 1314612 1314842 - NZ_LT635772.1 Anaerococcus mediterraneensis
336 863194 863445 + NZ_LT906477.1 Clostridium cochlearium
337 212204 212464 - NC_022737.1 Staphylococcus pasteuri SP1
338 1502187 1502420 + NC_022571.1 Clostridium saccharobutylicum DSM 13864
339 196431 196691 + NZ_CP045293.1 Paenibacillus guangzhouensis
340 1703626 1703880 + NZ_CP040924.1 Clostridium thermarum
341 260427 260660 - NZ_CP023671.1 Clostridium septicum
342 2288577 2288807 - NZ_CP036259.1 Sporomusa termitida
343 999145 999399 + NC_016584.1 Desulfosporosinus orientis DSM 765
344 1447540 1447773 + NZ_CP014204.2 Clostridium baratii
345 1235375 1235608 - NZ_CP016786.1 Clostridium isatidis
346 2355529 2355780 + NC_015275.1 Cellulosilyticum lentocellum DSM 5427
347 1524642 1524896 - NZ_CP034791.1 Caldicellulosiruptor changbaiensis
348 1917101 1917355 + NC_009437.1 Caldicellulosiruptor saccharolyticus DSM 8903
349 1204742 1204975 + NZ_CP027286.1 Clostridium chauvoei
350 3428899 3429132 - NZ_CP021850.1 Pseudoclostridium thermosuccinogenes
351 546389 546625 + NZ_CP045875.1 Heliorestis convoluta
352 1286365 1286625 - NZ_CP013911.1 Staphylococcus haemolyticus
353 2054129 2054401 - NZ_CP027770.1 Staphylococcus felis
354 1003535 1003789 + NC_018515.1 Desulfosporosinus meridiei DSM 13257
355 1551663 1551911 - NZ_CP054482.1 Macrococcus bohemicus
356 981624 981854 + NZ_CP066014.1 Anaerococcus vaginalis
357 655658 655912 + NC_015949.1 Caldicellulosiruptor lactoaceticus 6A
358 1548362 1548616 - NC_014652.1 Caldicellulosiruptor hydrothermalis 108
359 1243419 1243673 + NC_014721.1 Caldicellulosiruptor kristjanssonii I77R1B
360 1664485 1664739 - NC_014720.1 Caldicellulosiruptor kronotskyensis 2002
361 1109984 1110241 + NC_014964.1 Thermoanaerobacter brockii subsp. finnii Ako-1
362 2141227 2141466 - NZ_CP016379.1 Anoxybacter fermentans
363 1253707 1253967 + NZ_CP035288.1 Staphylococcus epidermidis
364 1085249 1085482 + NZ_CP030775.1 Clostridium butyricum
365 1290695 1290946 + NZ_CP047602.1 Thermoanaerobacterium aotearoense
366 3755993 3756226 - NZ_CP071376.1 Clostridium gasigenes
367 1884803 1885054 - NZ_CP014170.1 Clostridium tyrobutyricum
368 1123217 1123474 + NC_014209.1 Thermoanaerobacter mathranii subsp. mathranii str. A3
369 1311222 1311455 - NC_014377.1 Thermosediminibacter oceani DSM 16646
370 1128079 1128312 + NZ_CP017253.2 Clostridium taeniosporum
371 1319207 1319440 + NZ_CP043998.1 Clostridium diolis
372 1084694 1084948 + NC_014657.1 Caldicellulosiruptor owensensis OL
373 1467728 1467982 - NC_014392.1 Caldicellulosiruptor obsidiansis OB47
374 1220371 1220622 + NC_015555.1 Thermoanaerobacterium xylanolyticum LX-11
375 254046 254294 - NC_010337.2 Heliomicrobium modesticaldum Ice1
376 1095386 1095643 + NC_013921.1 Thermoanaerobacter italicus Ab9
377 1225888 1226145 + NC_015958.1 Thermoanaerobacter wiegelii Rt8.B1
378 1361547 1361798 + NC_011837.1 Clostridium kluyveri NBRC 12016
379 1298382 1298636 + NC_012034.1 Caldicellulosiruptor bescii DSM 6725
380 1596528 1596758 + NZ_CP067016.1 Anaerococcus obesiensis
381 2065133 2065384 - NC_019978.1 Halobacteroides halobius DSM 5150
382 623153 623422 + NZ_CP019573.1 Abyssicoccus albus
383 3491608 3491844 - NC_014624.2 Eubacterium callanderi
384 1669906 1670142 + NZ_CP019962.1 Eubacterium limosum
385 1831359 1831619 + NC_015687.1 Clostridium acetobutylicum DSM 1731
386 1299919 1300158 - NZ_CP035130.1 Gudongella oleilytica
387 3552448 3552699 + NZ_CP012395.1 Clostridium autoethanogenum DSM 10061
388 1316393 1316644 + NC_014328.1 Clostridium ljungdahlii DSM 13528
389 628041 628298 + NZ_CP032364.1 Lachnoanaerobaculum umeaense
390 1280785 1281036 + NZ_CP032416.1 Clostridium fermenticellae
391 1123402 1123653 + NZ_CP009170.1 Thermoanaerobacter kivui
392 1377911 1378144 + NC_020291.1 Clostridium saccharoperbutylacetonicum N1-4(HMT)
393 1725081 1725341 - NZ_LN879430.1 Herbinix luporum
394 2292115 2292372 - NZ_CP013019.1 Clostridium pasteurianum
395 1470751 1470984 - NC_008593.1 Clostridium novyi NT
396 1579186 1579443 - NZ_CP036523.1 Peptacetobacter hiranonis
397 1858143 1858370 - NZ_CP029487.1 Eubacterium maltosivorans
398 550547 550819 + NC_008346.1 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311
399 1250970 1251224 + NC_003869.1 Caldanaerobacter subterraneus subsp. tengcongensis MB4
400 3600198 3600449 - NC_018068.1 Desulfosporosinus acidiphilus SJ4
401 1331741 1332001 + NZ_CP009240.1 Megasphaera elsdenii 14-14
402 1640077 1640304 - NZ_CP017237.1 Moorella thermoacetica
403 612136 612366 + NZ_LT635480.1 Ndongobacter massiliensis
404 2646945 2647196 - NZ_CP028842.1 Clostridium botulinum
405 2897471 2897722 - NZ_CP011663.1 Clostridium sporogenes
406 474265 474525 - NZ_CP029462.1 Megasphaera stantonii
407 1285423 1285674 - NZ_CP068170.1 Erysipelatoclostridium ramosum
408 2658507 2658737 - NC_014833.1 Ruminococcus albus 7 = DSM 20455
409 3141957 3142220 + NZ_CP027002.1 [Ruminococcus] gnavus ATCC 29149
410 764116 764364 + NZ_CP014150.1 Paeniclostridium sordellii
411 631115 631345 + NC_011899.1 Halothermothrix orenii H 168
412 2724333 2724593 - NZ_CP048103.1 Kroppenstedtia eburnea
413 288544 288774 + NZ_HF545617.1 Ruminococcus bicirculans
414 4976810 4977061 - NZ_CP021434.1 Tumebacillus avium
415 1111242 1111493 + NZ_CP020953.1 Clostridium drakei
416 72079 72330 + NZ_CP011803.1 Clostridium carboxidivorans P7
417 3156724 3156975 - NZ_CP009933.1 Clostridium scatologenes
418 1864817 1865047 - NZ_CP048649.1 Aminipila butyrica
419 1960403 1960633 - NC_015172.1 Syntrophobotulus glycolicus DSM 8271
420 1168569 1168823 + NZ_AP024085.1 Faecalibacillus intestinalis
421 364320 364574 + NC_014220.1 Syntrophothermus lipocalidus DSM 12680
422 851666 851926 + NZ_LR778174.1 Veillonella parvula
423 1807711 1807956 - NC_016048.1 Oscillibacter valericigenes Sjm18-20
424 1458662 1458895 + NZ_AP019004.1 Phascolarctobacterium faecium
425 1321288 1321548 + NZ_CP022464.2 Enterocloster bolteae
426 3162144 3162389 - NZ_CP034413.2 Dysosmobacter welbionis
427 785142 785399 + NC_012778.1 [Eubacterium] eligens ATCC 27750
428 2215294 2215554 + NC_014393.1 Clostridium cellulovorans 743B
429 751515 751775 + NZ_LR134375.1 Veillonella dispar
430 1582904 1583155 + NZ_CP022657.1 Tumebacillus algifaecis
431 744041 744280 + NZ_AP022321.1 Veillonella nakazawae
432 1624016 1624246 - NC_014654.1 Halanaerobium hydrogeniformans
433 966598 966858 + NC_014376.1 [Clostridium] saccharolyticum WM1
434 2153207 2153473 - NZ_HG917868.1 Clostridium bornimense
435 2137428 2137688 - NC_006177.1 Symbiobacterium thermophilum IAM 14863
436 1144571 1144801 + NC_016894.1 Acetobacterium woodii DSM 1030
437 894177 894434 - NZ_LR134523.1 Peptoniphilus ivorii
438 929349 929579 + NC_017455.1 Halanaerobium praevalens DSM 2228
439 1443376 1443660 - NC_013385.1 Ammonifex degensii KC4
440 2562692 2562949 - NZ_CP015756.1 Clostridium estertheticum subsp. estertheticum
441 2491623 2491865 + NZ_CP048436.1 Flavonifractor plautii
442 542525 542758 + NZ_CP027228.1 Mogibacterium diversum
443 475527 475787 + NZ_AP019711.1 Amedibacterium intestinale
444 1345843 1346103 - NZ_LT906470.1 Veillonella rodentium
445 726295 726537 + NC_015520.1 Mahella australiensis 50-1 BON
446 1565041 1565292 - NZ_LR590481.1 Hathewaya histolytica
447 1491749 1491994 - NZ_CP034234.1 Erysipelothrix piscisicarius
448 2108557 2108787 - NZ_CP024955.1 Kyrpidia spormannii
449 1119016 1119246 + NC_014098.1 Kyrpidia tusciae DSM 2912
450 2034933 2035175 - NZ_CP060715.1 Erysipelothrix inopinata
451 2509874 2510107 + NC_009633.1 Alkaliphilus metalliredigens QYMF
452 2666709 2666942 - NZ_CP019870.1 Clostridioides difficile
453 2069296 2069547 - NC_013205.1 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
454 1196934 1197179 + NZ_LR134439.1 Erysipelothrix rhusiopathiae
455 1791087 1791338 + NZ_CP014176.1 Clostridium argentinense
456 1764524 1764757 - NC_009922.1 Alkaliphilus oremlandii OhILAs
457 1032498 1032734 + NC_013740.1 Acidaminococcus fermentans DSM 20731
458 1107080 1107331 + NZ_LT906446.1 Megamonas hypermegale
459 2683198 2683443 - NZ_CP053187.1 Turicibacter sanguinis
460 993513 993770 + NZ_AP019309.1 Intestinibaculum porci
461 3787193 3787444 - NC_011830.1 Desulfitobacterium hafniense DCB-2
462 1350975 1351226 + NZ_CP046996.1 Dehalobacter restrictus
463 2712466 2712720 - NC_021184.1 Desulfoscipio gibsoniae DSM 7213
464 2114710 2114937 - NZ_CP007032.1 Desulfitobacterium metallireducens DSM 15288
465 2988697 2988948 - NC_018017.1 Desulfitobacterium dehalogenans ATCC 51507
466 3217686 3217916 - NC_015589.1 Desulfotomaculum ruminis DSM 2154
467 828167 828397 + NC_009253.1 Desulfotomaculum reducens MI-1
468 849806 850042 + NZ_CP019698.1 Desulfotomaculum ferrireducens
469 1183682 1183924 + NC_015437.1 Selenomonas sputigena ATCC 35185
470 2520663 2520926 - NC_019903.1 Desulfitobacterium dichloroeliminans LMG P-21439
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_008525.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF06949.13 0.95 446 449.0 same-strand Protein of unknown function (DUF1292)
2 PF03652.17 0.99 461 3 same-strand Holliday junction resolvase
3 PF01411.21 0.81 377 89.0 same-strand tRNA synthetases class II (A)
4 PF02272.21 0.81 377 91 same-strand DHHA1 domain
5 PF07973.16 0.81 378 89 same-strand Threonyl and Alanyl tRNA synthetase second additional domain
++ More..