Result : Q02A54
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (Asp/Glu-ADT subunit C) (EC 6.3.5.-) |
| NCBI Accession ID | CP000473.1 |
| Organism | Solibacter usitatus (strain Ellin6076) |
| Left | 1327464 |
| Right | 1327763 |
| Strand | - |
| Nucleotide Sequence | GTGAAGATCACCGAAAAGGAAGTTCGCTACGTAGCCGGCCTGGCCAACCTCAATCTCACCGAGCAGGAGATCGCGCGCATGCAGGTCGATCTCGATGGCATTTTGGAGCACATGGCGCGGCTTAACGAAATCGACACCGAAGGCGTCGCGCCCATGTCGCAGGTGCTCTTCGAAGCCGAAGAGACCGCCACCTTGCGCCCCGATTCGCCCATTCCCCCGCTCGGCAATCAGGCCGCGATGGCCAATGCCCCGCAATCGGGCGCGGGCTATTTCAAAGTTCCCAAAGTCATCGAACGTTAA |
| Sequence | MKITEKEVRYVAGLANLNLTEQEIARMQVDLDGILEHMARLNEIDTEGVAPMSQVLFEAEETATLRPDSPIPPLGNQAAMANAPQSGAGYFKVPKVIER |
| Source of smORF | Swiss-Prot |
| Function | Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln). {ECO:0000255|HAMAP-Rule:MF_00122}. |
| Pubmed ID | 19201974 |
| Domain | CDD:412411 |
| Functional Category | Others |
| Uniprot ID | Q02A54 |
| ORF Length (Amino Acid) | 99 |
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| Conservation Analysis |
No. of Species: 3
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 8728378 | 8728677 | - | NZ_CP063849.1 | Paludibaculum fermentans |
| 2 | 349591 | 349893 | + | NC_015064.1 | Granulicella tundricola MP5ACTX9 |
| 3 | 455926 | 456213 | + | NZ_CP010311.1 | Geoalkalibacter subterraneus |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP063849.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00005.29 | 0.67 | 2 | 2705.5 | same-strand | ABC transporter |
| 2 | PF01425.23 | 1.0 | 3 | 43 | same-strand | Amidase |
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