Result : Q02885
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein YubO |
| NCBI Accession ID | X17539.1 |
| Organism | Escherichia coli (strain K12) |
| Left | 467 |
| Right | 754 |
| Strand | + |
| Nucleotide Sequence | ATGAGTACCCGAAATATCCACGTTAACACCGCGTCGTACACGCTTCTTGTTGCCGGGAAGAAAAAAAACACCGGGGAAGAGTGGGACGTCCTGGAATTCAGCAGCCTGACTGAGCTGAAAAAATATCGCAAAAGCCACCCGGAAAAGATGGCCTTCAGCTATAGCTACGCGCTCAGCCGGGGTGTGGATACGCAGTTCCGCCATATCAACATTGCGGAAGCCGATCACTTCAAACAGTTCCTGCGTCAGATTAAGCGTGCCGGCCTCGATATCCGGGCGATCTGCTGA |
| Sequence | MSTRNIHVNTASYTLLVAGKKKNTGEEWDVLEFSSLTELKKYRKSHPEKMAFSYSYALSRGVDTQFRHINIAEADHFKQFLRQIKRAGLDIRAIC |
| Source of smORF | Swiss-Prot |
| Function | |
| Pubmed ID | 2693941 10366527 |
| Domain | |
| Functional Category | Others |
| Uniprot ID | Q02885 |
| ORF Length (Amino Acid) | 95 |
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| Conservation Analysis |
No. of Species: 3
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 20046 | 20306 | - | NZ_CP026049.1 | Raoultella planticola |
| 2 | 43107 | 43421 | + | NC_015963.1 | Enterobacter soli |
| 3 | 558 | 803 | + | NZ_CP045770.1 | Enterobacter cancerogenus |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP026049.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF06952.13 | 0.67 | 2 | 1642.5 | same-strand | PsiA protein |
| 2 | PF06290.13 | 0.67 | 2 | 2369.0 | same-strand | Plasmid SOS inhibition protein (PsiB) |
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