* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000962.3
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF13489.8
|
1.0
|
2
|
3207.0
|
opposite-strand
|
Methyltransferase domain
|
2
|
PF08241.14
|
1.0
|
2
|
5058.0
|
both-strands
|
Methyltransferase domain
|
3
|
PF13649.8
|
1.0
|
2
|
5058.0
|
both-strands
|
Methyltransferase domain
|
4
|
PF08242.14
|
1.0
|
2
|
5058.0
|
both-strands
|
Methyltransferase domain
|
5
|
PF00535.28
|
1.0
|
2
|
1162.0
|
both-strands
|
Glycosyl transferase family 2
|
6
|
PF11139.10
|
1.0
|
2
|
1098.0
|
same-strand
|
Sap, sulfolipid-1-addressing protein
|
7
|
PF13641.8
|
1.0
|
2
|
130.0
|
same-strand
|
Glycosyltransferase like family 2
|
8
|
PF00501.30
|
1.0
|
2
|
1324.0
|
same-strand
|
AMP-binding enzyme
|
9
|
PF03176.17
|
1.0
|
2
|
3194.0
|
opposite-strand
|
MMPL family
|
10
|
PF12349.10
|
1.0
|
2
|
3194.0
|
opposite-strand
|
Sterol-sensing domain of SREBP cleavage-activation
|
++ More..