Result : P9WKT5
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein Rv0500B |
| NCBI Accession ID | AL123456.3 |
| Organism | Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) |
| Left | 591475 |
| Right | 591576 |
| Strand | + |
| Nucleotide Sequence | ATGGGTTCAGTAATCAAGAAGCGGCGCAAGCGCATGTCCAAGAAAAAGCATCGCAAGCTGCTGCGTCGCACCCGGGTGCAGCGCAGGAAACTGGGCAAATAG |
| Sequence | MGSVIKKRRKRMSKKKHRKLLRRTRVQRRKLGK |
| Source of smORF | Swiss-Prot |
| Function | |
| Pubmed ID | 9634230 12368430 |
| Domain | |
| Functional Category | Others |
| Uniprot ID | P9WKT5 |
| ORF Length (Amino Acid) | 33 |
++ More..
| Conservation Analysis |
No. of Species: 191
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3860160 | 3860261 | - | NZ_CP029146.1 | Rhodococcus ruber |
| 2 | 626519 | 626620 | + | NZ_AP017900.1 | Nocardia seriolae |
| 3 | 4340783 | 4340884 | - | NZ_CP022208.1 | Rhodococcus pyridinivorans |
| 4 | 4257200 | 4257301 | - | NZ_AP024310.1 | Mycobacterium heckeshornense |
| 5 | 377781 | 377882 | + | NZ_CP004353.1 | Corynebacterium vitaeruminis DSM 20294 |
| 6 | 3986871 | 3986972 | - | NZ_LT906450.1 | Rhodococcus rhodochrous |
| 7 | 1195210 | 1195311 | + | NC_016906.1 | Gordonia polyisoprenivorans VH2 |
| 8 | 1873440 | 1873541 | - | NZ_AP022568.1 | Mycobacterium simiae |
| 9 | 6003007 | 6003108 | - | NC_015312.1 | Pseudonocardia dioxanivorans CB1190 |
| 10 | 601656 | 601757 | + | NC_015848.1 | Mycobacterium canettii CIPT 140010059 |
| 11 | 591475 | 591576 | + | NC_000962.3 | Mycobacterium tuberculosis H37Rv |
| 12 | 308724 | 308825 | + | NZ_LN831026.1 | Corynebacterium diphtheriae |
| 13 | 377426 | 377527 | + | NZ_LR738855.1 | Corynebacterium rouxii |
| 14 | 2043180 | 2043281 | - | NZ_CP033897.1 | Corynebacterium gerontici |
| 15 | 4226919 | 4227020 | + | NZ_AP022569.1 | Mycobacterium cookii |
| 16 | 251200 | 251301 | + | NZ_CP009248.1 | Corynebacterium sphenisci DSM 44792 |
| 17 | 2228158 | 2228259 | - | NC_012704.1 | Corynebacterium kroppenstedtii DSM 44385 |
| 18 | 2831074 | 2831175 | - | NZ_CP029543.1 | Mycobacterium leprae |
| 19 | 3839786 | 3839887 | + | NZ_LS483468.1 | Rhodococcus coprophilus |
| 20 | 2875068 | 2875169 | - | NZ_CP015961.1 | Dietzia timorensis |
| 21 | 678752 | 678853 | + | NC_014158.1 | Tsukamurella paurometabola DSM 20162 |
| 22 | 4449985 | 4450086 | + | NZ_AP022573.1 | Mycobacterium saskatchewanense |
| 23 | 1811680 | 1811781 | + | NZ_LT906443.1 | Corynebacterium ulcerans |
| 24 | 4771066 | 4771167 | + | NZ_AP022619.1 | Mycobacterium paraseoulense |
| 25 | 4976174 | 4976275 | + | NZ_AP022582.1 | Mycobacterium seoulense |
| 26 | 3682307 | 3682408 | - | NZ_AP022590.1 | Mycobacterium mantenii |
| 27 | 2135171 | 2135272 | - | NZ_CP035299.1 | Corynebacterium pelargi |
| 28 | 440185 | 440286 | + | NZ_CP006764.1 | Corynebacterium doosanense CAU 212 = DSM 45436 |
| 29 | 2262212 | 2262313 | + | NZ_CP053564.1 | Pseudonocardia broussonetiae |
| 30 | 713289 | 713390 | + | NZ_CP019066.1 | Tsukamurella tyrosinosolvens |
| 31 | 3637556 | 3637657 | - | NZ_CP011853.1 | Gordonia phthalatica |
| 32 | 261648 | 261749 | + | NZ_CP011312.1 | Corynebacterium kutscheri |
| 33 | 281398 | 281499 | + | NC_017301.2 | Corynebacterium pseudotuberculosis C231 |
| 34 | 5474820 | 5474921 | - | NC_006361.1 | Nocardia farcinica IFM 10152 |
| 35 | 6654320 | 6654421 | - | NZ_CP018082.1 | Nocardia mangyaensis |
| 36 | 797282 | 797383 | + | NZ_LR130759.1 | Mycobacterium basiliense |
| 37 | 4512431 | 4512532 | - | NZ_CP045929.1 | Saccharopolyspora coralli |
| 38 | 292660 | 292761 | + | NZ_CP026947.1 | Corynebacterium yudongzhengii |
| 39 | 525050 | 525151 | + | NC_015576.1 | Mycolicibacter sinensis |
| 40 | 529139 | 529240 | + | NZ_LT906469.1 | Mycolicibacter terrae |
| 41 | 1432176 | 1432277 | - | NZ_AP022562.1 | Mycobacterium novum |
| 42 | 409820 | 409921 | + | NC_020506.1 | Corynebacterium callunae DSM 20147 |
| 43 | 2398397 | 2398498 | - | NZ_LS483460.1 | Corynebacterium minutissimum |
| 44 | 6967842 | 6967943 | + | NZ_CP031142.1 | Saccharopolyspora pogona |
| 45 | 792887 | 792988 | - | NZ_AP022606.1 | Mycobacterium branderi |
| 46 | 359111 | 359212 | + | NZ_CP010827.1 | Corynebacterium singulare |
| 47 | 85028 | 85129 | - | NZ_LR134352.1 | Nocardia asteroides |
| 48 | 4916982 | 4917083 | - | NZ_CP062008.1 | Mycolicibacterium mucogenicum DSM 44124 |
| 49 | 2412551 | 2412652 | - | NZ_AP022577.1 | Mycolicibacterium aubagnense |
| 50 | 4831831 | 4831932 | + | NZ_AP022616.1 | Mycolicibacterium phocaicum |
| 51 | 2118554 | 2118655 | - | NZ_CP033898.1 | Corynebacterium pseudopelargi |
| 52 | 3005880 | 3005981 | - | NZ_CP061007.1 | Saccharopolyspora spinosa |
| 53 | 3776160 | 3776261 | - | NZ_CP027433.1 | Gordonia iterans |
| 54 | 4297677 | 4297778 | + | NZ_AP022609.1 | Mycolicibacter hiberniae |
| 55 | 2363502 | 2363603 | + | NZ_AP022589.1 | Mycolicibacter minnesotensis |
| 56 | 336872 | 336973 | + | NZ_CP006841.1 | Corynebacterium lactis RW2-5 |
| 57 | 7271926 | 7272027 | + | NZ_CP022088.2 | Nocardia brasiliensis |
| 58 | 7776474 | 7776575 | - | NC_009142.1 | Saccharopolyspora erythraea NRRL 2338 |
| 59 | 3961027 | 3961128 | + | NZ_AP022567.1 | Mycolicibacterium mageritense |
| 60 | 7215403 | 7215504 | - | NZ_AP023396.1 | Nocardia wallacei |
| 61 | 7668865 | 7668966 | + | NZ_CP041695.1 | Nocardia otitidiscaviarum |
| 62 | 1057572 | 1057673 | + | NZ_CP020809.1 | Mycobacterium dioxanotrophicus |
| 63 | 92310 | 92411 | - | NZ_CP012150.1 | Mycobacterium goodii |
| 64 | 1058742 | 1058843 | + | NZ_LN831039.1 | Mycolicibacterium smegmatis |
| 65 | 991175 | 991276 | + | NZ_CP025546.1 | Mycobacterium paragordonae |
| 66 | 249167 | 249268 | - | NZ_AP022579.1 | Mycolicibacterium boenickei |
| 67 | 873954 | 874055 | + | NC_008726.1 | Mycolicibacterium vanbaalenii PYR-1 |
| 68 | 4032131 | 4032232 | + | NC_022663.1 | Mycobacterium kansasii ATCC 12478 |
| 69 | 1563369 | 1563470 | - | NZ_AP022596.1 | Mycolicibacterium helvum |
| 70 | 3043367 | 3043468 | + | NZ_AP022600.1 | Mycolicibacterium tokaiense |
| 71 | 2407014 | 2407115 | + | NZ_CP058277.1 | Mycobacterium marinum |
| 72 | 2328964 | 2329065 | + | NZ_CP026746.1 | Nocardia cyriacigeorgica |
| 73 | 5328850 | 5328951 | - | NZ_CP011269.1 | Mycolicibacterium fortuitum |
| 74 | 2093776 | 2093877 | + | NZ_AP022588.1 | Mycolicibacterium sediminis |
| 75 | 1696817 | 1696918 | + | NZ_AP023172.1 | Rhodococcus qingshengii |
| 76 | 409300 | 409401 | + | NZ_AP022613.1 | Mycobacterium conspicuum |
| 77 | 701379 | 701480 | + | NZ_CP011491.1 | Mycolicibacterium vaccae 95051 |
| 78 | 5879806 | 5879907 | - | NZ_AP022560.1 | Mycolicibacterium moriokaense |
| 79 | 2888343 | 2888444 | - | NZ_AP022576.1 | Mycobacterium florentinum |
| 80 | 3194960 | 3195061 | - | NZ_AP022587.1 | Mycobacterium stomatepiae |
| 81 | 5151162 | 5151263 | + | NZ_AP022601.1 | Mycobacterium gallinarum |
| 82 | 1043373 | 1043474 | + | NZ_AP018410.1 | Mycobacterium pseudoshottsii JCM 15466 |
| 83 | 717230 | 717331 | - | NZ_AP022598.1 | Mycolicibacterium parafortuitum |
| 84 | 4167335 | 4167436 | - | NZ_AP022617.1 | Mycolicibacterium monacense |
| 85 | 719316 | 719417 | + | NZ_LR134356.1 | Mycolicibacterium aurum |
| 86 | 2800416 | 2800517 | - | NZ_AP022593.1 | Mycolicibacterium arabiense |
| 87 | 2461609 | 2461710 | + | NZ_AP022572.1 | Mycobacterium shottsii |
| 88 | 4965914 | 4966015 | + | NZ_AP022608.1 | Mycolicibacterium gadium |
| 89 | 4951697 | 4951798 | + | NZ_CP033972.1 | Gordonia insulae |
| 90 | 3512748 | 3512849 | - | NZ_AP022614.1 | Mycobacterium parmense |
| 91 | 5016637 | 5016738 | - | NZ_AP022561.1 | Mycolicibacterium aichiense |
| 92 | 4223210 | 4223311 | - | NZ_AP022612.1 | Mycolicibacterium confluentis |
| 93 | 243204 | 243305 | - | NZ_AP022574.1 | Mycolicibacterium psychrotolerans |
| 94 | 1239979 | 1240080 | + | NZ_AP022570.1 | Mycolicibacterium poriferae |
| 95 | 2818951 | 2819052 | - | NZ_AP022565.1 | Mycolicibacterium alvei |
| 96 | 908603 | 908704 | + | NZ_AP022610.1 | Mycolicibacterium madagascariense |
| 97 | 4950098 | 4950199 | + | NZ_AP022620.1 | Mycolicibacterium anyangense |
| 98 | 3911521 | 3911622 | - | NZ_AP022563.1 | Mycolicibacterium duvalii |
| 99 | 2013334 | 2013435 | + | NZ_CP043474.1 | Mycobacterium grossiae |
| 100 | 3646955 | 3647056 | - | NZ_AP022586.1 | Mycolicibacterium litorale |
| 101 | 4585814 | 4585915 | - | NZ_CP011530.1 | Mycobacteroides immunogenum |
| 102 | 4880454 | 4880555 | - | NC_016948.1 | Mycobacterium paraintracellulare |
| 103 | 1602925 | 1603026 | - | NZ_AP022599.1 | Mycolicibacterium pulveris |
| 104 | 4217593 | 4217694 | - | NZ_LR134355.1 | Mycolicibacterium chitae |
| 105 | 4752405 | 4752506 | - | NC_016946.1 | Mycobacterium intracellulare ATCC 13950 |
| 106 | 5169940 | 5170041 | + | NZ_LR026975.1 | Mycolicibacterium hassiacum DSM 44199 |
| 107 | 4618706 | 4618807 | - | NZ_CP023147.1 | Mycobacterium marseillense |
| 108 | 4203865 | 4203966 | - | NZ_CP027793.1 | Rhodococcus hoagii |
| 109 | 740540 | 740641 | + | NZ_AP018164.1 | Mycobacterium shigaense |
| 110 | 1069724 | 1069825 | + | NC_013441.1 | Gordonia bronchialis DSM 43247 |
| 111 | 4583139 | 4583240 | - | NZ_CP009360.4 | Mycobacterium avium subsp. hominissuis |
| 112 | 2891179 | 2891280 | + | NZ_CP015235.1 | Rhodococcus fascians D188 |
| 113 | 2070137 | 2070238 | + | NZ_CP059694.1 | Gordonia rubripertincta |
| 114 | 3881483 | 3881584 | - | NZ_AP022581.1 | Mycobacterium lacus |
| 115 | 4056051 | 4056152 | - | NZ_CP014955.1 | Mycobacteroides abscessus |
| 116 | 1383091 | 1383192 | - | NZ_AP022615.1 | Mycobacterium heidelbergense |
| 117 | 4108647 | 4108748 | - | NZ_CP007220.1 | Mycobacteroides chelonae CCUG 47445 |
| 118 | 4106555 | 4106656 | - | NZ_AP018165.1 | [Mycobacterium] stephanolepidis |
| 119 | 75954 | 76055 | - | NZ_CP027114.1 | Gordonia alkanivorans |
| 120 | 2264351 | 2264452 | + | NZ_AP022595.1 | Mycolicibacterium sarraceniae |
| 121 | 2492857 | 2492958 | + | NZ_AP022583.1 | Mycobacterium noviomagense |
| 122 | 3831551 | 3831652 | - | NZ_CP024633.1 | Mycobacteroides salmoniphilum |
| 123 | 3192118 | 3192219 | - | NZ_CP048813.1 | Rhodococcus triatomae |
| 124 | 670294 | 670395 | + | NC_015564.1 | Hoyosella subflava DQS3-9A1 |
| 125 | 3748648 | 3748749 | - | NZ_CP010271.1 | Mycobacteroides saopaulense |
| 126 | 1198898 | 1198999 | + | NZ_AP022618.1 | Mycolicibacterium insubricum |
| 127 | 3212516 | 3212617 | - | NZ_AP022575.1 | Mycobacterium shinjukuense |
| 128 | 603789 | 603890 | + | NZ_CP011883.2 | Mycobacterium haemophilum DSM 44634 |
| 129 | 2326435 | 2326536 | - | NZ_AP022603.1 | Mycolicibacterium fallax |
| 130 | 358549 | 358650 | + | NZ_AP022605.1 | Mycobacterium doricum |
| 131 | 341544 | 341645 | + | NZ_CP011542.1 | Corynebacterium mustelae |
| 132 | 684922 | 685023 | - | NZ_CP009312.1 | Lawsonella clevelandensis |
| 133 | 2593897 | 2593998 | - | NZ_CP033896.1 | Corynebacterium choanae |
| 134 | 330637 | 330738 | + | NC_012590.1 | Corynebacterium aurimucosum ATCC 700975 |
| 135 | 268681 | 268782 | + | NZ_CP026948.1 | Corynebacterium liangguodongii |
| 136 | 386084 | 386185 | + | NZ_CP009249.1 | Corynebacterium phocae |
| 137 | 2042938 | 2043039 | + | NZ_CP068168.1 | Corynebacterium amycolatum |
| 138 | 6446070 | 6446171 | - | NZ_AP018920.1 | Pseudonocardia autotrophica |
| 139 | 319269 | 319370 | + | NZ_CP009245.1 | Corynebacterium aquilae DSM 44791 |
| 140 | 263697 | 263798 | + | NZ_CP019688.1 | Corynebacterium glaucum |
| 141 | 646992 | 647093 | + | NZ_LT906483.1 | Mycolicibacterium thermoresistibile |
| 142 | 3116341 | 3116442 | - | NZ_CP015453.1 | Dietzia psychralcaliphila |
| 143 | 2943167 | 2943268 | - | NZ_CP015449.1 | Dietzia lutea |
| 144 | 596726 | 596827 | + | NZ_AP017369.1 | Corynebacterium suranareeae |
| 145 | 695166 | 695267 | + | NZ_CP006842.1 | Corynebacterium glyciniphilum AJ 3170 |
| 146 | 1612989 | 1613090 | - | NZ_CP042429.1 | Corynebacterium nuruki S6-4 |
| 147 | 468576 | 468677 | + | NC_004369.1 | Corynebacterium efficiens YS-314 |
| 148 | 439107 | 439208 | + | NC_020302.1 | Corynebacterium halotolerans YIM 70093 = DSM 44683 |
| 149 | 461088 | 461189 | + | NZ_CP015622.1 | Corynebacterium crudilactis |
| 150 | 466424 | 466525 | + | NZ_CP009220.1 | Corynebacterium deserti GIMN1.010 |
| 151 | 1808165 | 1808266 | - | NZ_CP069485.1 | Corynebacterium glucuronolyticum |
| 152 | 396984 | 397085 | + | NZ_CP009251.1 | Corynebacterium stationis |
| 153 | 407042 | 407143 | + | NZ_LR698967.1 | Corynebacterium ammoniagenes |
| 154 | 386650 | 386751 | + | NZ_CP009246.1 | Corynebacterium flavescens |
| 155 | 2320718 | 2320819 | - | NC_021663.1 | Corynebacterium terpenotabidum Y-11 |
| 156 | 1733748 | 1733849 | - | NZ_CP032788.1 | Corynebacterium xerosis |
| 157 | 336388 | 336489 | + | NZ_CP011545.1 | Corynebacterium testudinoris |
| 158 | 2347919 | 2348020 | - | NZ_CP011541.1 | Corynebacterium epidermidicanis |
| 159 | 313933 | 314034 | + | NZ_CP007790.1 | Corynebacterium marinum DSM 44953 |
| 160 | 2317355 | 2317456 | - | NC_015673.1 | Corynebacterium resistens DSM 45100 |
| 161 | 1216267 | 1216368 | - | NZ_CP014635.1 | Corynebacterium simulans |
| 162 | 364571 | 364672 | + | NZ_LT906467.1 | Corynebacterium imitans |
| 163 | 857798 | 857899 | - | NZ_CP068161.1 | Corynebacterium propinquum |
| 164 | 344445 | 344546 | + | NZ_CP039247.1 | Corynebacterium endometrii |
| 165 | 2358689 | 2358790 | - | NZ_CP067012.1 | Corynebacterium kefirresidentii |
| 166 | 262571 | 262672 | + | NZ_CP011311.1 | Corynebacterium camporealensis |
| 167 | 252770 | 252871 | + | NZ_CP011546.1 | Corynebacterium uterequi |
| 168 | 513228 | 513329 | + | NZ_LS483459.1 | Corynebacterium jeikeium |
| 169 | 1198546 | 1198647 | + | NZ_LS483464.1 | Corynebacterium renale |
| 170 | 202768 | 202869 | + | NZ_CP009215.1 | Corynebacterium ureicelerivorans |
| 171 | 1961759 | 1961860 | - | NZ_CP046883.1 | Corynebacterium anserum |
| 172 | 181463 | 181564 | + | NC_022198.1 | Corynebacterium argentoratense DSM 44202 |
| 173 | 567118 | 567219 | - | NZ_CP038157.1 | Corynebacterium sanguinis |
| 174 | 500062 | 500163 | + | NZ_CP016076.1 | Actinoalloteichus fjordicus |
| 175 | 487468 | 487569 | + | NZ_CP022521.1 | Actinoalloteichus hoggarensis |
| 176 | 479052 | 479153 | + | NC_022116.1 | Amycolatopsis mediterranei RB |
| 177 | 8884234 | 8884335 | - | NZ_CP016174.1 | Amycolatopsis orientalis |
| 178 | 7955883 | 7955984 | - | NZ_CP008953.1 | Amycolatopsis japonica |
| 179 | 487784 | 487885 | + | NC_021252.1 | Amycolatopsis keratiniphila |
| 180 | 369860 | 369961 | + | NZ_CP009247.1 | Corynebacterium frankenforstense DSM 45800 |
| 181 | 348207 | 348308 | + | NZ_CP008944.1 | Corynebacterium atypicum |
| 182 | 450829 | 450930 | + | NC_021915.1 | Corynebacterium maris DSM 45190 |
| 183 | 2225512 | 2225613 | - | NZ_LT906473.1 | Corynebacterium cystitidis |
| 184 | 1957680 | 1957781 | + | NZ_LT906481.1 | Corynebacterium urealyticum |
| 185 | 1629105 | 1629206 | + | NC_014168.1 | Segniliparus rotundus DSM 44985 |
| 186 | 628710 | 628811 | + | NZ_CP011502.1 | Aeromicrobium erythreum |
| 187 | 465886 | 465987 | + | NZ_CP016353.1 | Prauserella marina |
| 188 | 3245106 | 3245207 | - | NZ_CP026952.1 | Aeromicrobium chenweiae |
| 189 | 3228755 | 3228856 | - | NZ_CP045737.1 | Aeromicrobium yanjiei |
| 190 | 275322 | 275423 | + | NC_013159.1 | Saccharomonospora viridis DSM 43017 |
| 191 | 7010866 | 7010967 | + | NZ_CP015163.1 | Amycolatopsis albispora |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP029146.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF05768.16 | 0.65 | 124 | 3432.5 | same-strand | Glutaredoxin-like domain (DUF836) |
| 2 | PF12710.9 | 0.92 | 176 | 2786.0 | opposite-strand | haloacid dehalogenase-like hydrolase |
| 3 | PF00702.28 | 0.83 | 159 | 2814 | opposite-strand | haloacid dehalogenase-like hydrolase |
| 4 | PF01553.23 | 0.69 | 131 | 1213 | same-strand | Acyltransferase |
| 5 | PF12728.9 | 0.82 | 157 | 198 | same-strand | Helix-turn-helix domain |
| 6 | PF14748.8 | 1.0 | 191 | 593 | same-strand | Pyrroline-5-carboxylate reductase dimerisation |
| 7 | PF03807.19 | 1.0 | 191 | 594.5 | same-strand | NADP oxidoreductase coenzyme F420-dependent |
++ More..