* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000962.3
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF09335.13
|
1.0
|
2
|
4305.0
|
opposite-strand
|
SNARE associated Golgi protein
|
2
|
PF01642.24
|
1.0
|
2
|
1140.5
|
same-strand
|
Methylmalonyl-CoA mutase
|
3
|
PF02310.21
|
1.0
|
2
|
14.0
|
same-strand
|
B12 binding domain
|
4
|
PF02452.19
|
1.0
|
2
|
-3.0
|
same-strand
|
PemK-like, MazF-like toxin of type II toxin-antitoxin system
|
5
|
PF03308.18
|
1.0
|
2
|
311.0
|
same-strand
|
Methylmalonyl Co-A mutase-associated GTPase MeaB
|
6
|
PF02492.21
|
1.0
|
2
|
311.0
|
same-strand
|
CobW/HypB/UreG, nucleotide-binding domain
|
7
|
PF00144.26
|
1.0
|
2
|
1371.0
|
same-strand
|
Beta-lactamase
|
8
|
PF08241.14
|
1.0
|
2
|
2730.0
|
opposite-strand
|
Methyltransferase domain
|
9
|
PF13649.8
|
1.0
|
2
|
2730.0
|
opposite-strand
|
Methyltransferase domain
|
10
|
PF13847.8
|
1.0
|
2
|
2730.0
|
opposite-strand
|
Methyltransferase domain
|
11
|
PF08242.14
|
1.0
|
2
|
2730.0
|
opposite-strand
|
Methyltransferase domain
|
12
|
PF07311.14
|
1.0
|
2
|
3561.0
|
opposite-strand
|
Dodecin
|
++ More..