* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000962.3
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF18963.2
|
1.0
|
2
|
3910.0
|
opposite-strand
|
Family of unknown function (DUF5703)
|
2
|
PF01180.23
|
1.0
|
2
|
2801.0
|
opposite-strand
|
Dihydroorotate dehydrogenase
|
3
|
PF01161.22
|
1.0
|
2
|
2266.0
|
same-strand
|
Phosphatidylethanolamine-binding protein
|
4
|
PF01546.30
|
1.0
|
2
|
872.0
|
same-strand
|
Peptidase family M20/M25/M40
|
5
|
PF07687.16
|
1.0
|
2
|
872.0
|
same-strand
|
Peptidase dimerisation domain
|
6
|
PF05016.17
|
1.0
|
2
|
-3.0
|
same-strand
|
ParE toxin of type II toxin-antitoxin system, parDE
|
7
|
PF00156.29
|
1.0
|
2
|
441.0
|
opposite-strand
|
Phosphoribosyl transferase domain
|
8
|
PF02325.19
|
1.0
|
2
|
2945.5
|
same-strand
|
YGGT family
|
++ More..