Result : P77551
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Putative endopeptidase RzpR (EC 3.4.-.-) (Putative Rz endopeptidase from lambdoid prophage Rac) |
| NCBI Accession ID | D90774.1 |
| Organism | Escherichia coli (strain K12) |
| Left | 9251 |
| Right | 9556 |
| Strand | + |
| Nucleotide Sequence | ATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCGAAAGCTGAAAATGATGCTCTGCGTGATGATGTTGCCGCTGGTCGTCGTCGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCCGGGAACGACTGGTAATGATGCAGGCCCAACTTGAAGGTGCTCAGCAATACATAACCGAGCAGTGTTTAAAGTAA |
| Sequence | MRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLVMMQAQLEGAQQYITEQCLK |
| Source of smORF | Swiss-Prot |
| Function | |
| Pubmed ID | 9097039 9278503 16738553 |
| Domain | |
| Functional Category | Antimicrobial |
| Uniprot ID | P77551 |
| ORF Length (Amino Acid) | 99 |
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| Conservation Analysis |
No. of Species: 28
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1423345 | 1423644 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 2 | 578272 | 578568 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 3 | 2326791 | 2327090 | - | NZ_LR134340.1 | Escherichia marmotae |
| 4 | 1858222 | 1858521 | + | NZ_LR134340.1 | Escherichia marmotae |
| 5 | 36871 | 37167 | + | NZ_CP068597.1 | Paenibacillus sonchi |
| 6 | 1627658 | 1627954 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 7 | 1274701 | 1275000 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 8 | 1779145 | 1779447 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 9 | 1946443 | 1946745 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 10 | 2919273 | 2919575 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 11 | 2234636 | 2234938 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 12 | 1184145 | 1184453 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 13 | 2691252 | 2691560 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 14 | 2183679 | 2183987 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 15 | 1560205 | 1560507 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 16 | 2131551 | 2131850 | - | NZ_AP014857.1 | Escherichia albertii |
| 17 | 1340623 | 1340922 | + | NZ_AP014857.1 | Escherichia albertii |
| 18 | 977947 | 978258 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 19 | 1115824 | 1116162 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 20 | 1729970 | 1730266 | + | NZ_CP038853.1 | Pantoea vagans |
| 21 | 1645534 | 1645836 | - | NZ_CP027107.1 | Cronobacter sakazakii |
| 22 | 368838 | 369164 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 23 | 1684342 | 1684650 | - | NZ_CP028271.1 | Mixta intestinalis |
| 24 | 2965188 | 2965493 | - | NZ_LR134201.1 | Cedecea lapagei |
| 25 | 2112604 | 2112903 | - | NZ_LR134201.1 | Cedecea lapagei |
| 26 | 3123132 | 3123428 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 27 | 4032878 | 4033141 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 28 | 3432929 | 3433192 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 29 | 2277002 | 2277304 | - | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 30 | 1252363 | 1252665 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 31 | 3043704 | 3044009 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 32 | 1558019 | 1558315 | + | NZ_CP035129.1 | Kosakonia cowanii |
| 33 | 3216500 | 3216802 | - | NZ_CP041247.1 | Raoultella electrica |
| 34 | 3477915 | 3478217 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 35 | 3014146 | 3014448 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 36 | 2647574 | 2647894 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 37 | 2047628 | 2047921 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 38 | 1684091 | 1684393 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 39 | 1483928 | 1484230 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 40 | 962238 | 962546 | + | NZ_CP023525.1 | Cedecea neteri |
| 41 | 1423077 | 1423331 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 42 | 3690042 | 3690323 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 43 | 4187277 | 4187558 | + | NC_012962.1 | Photorhabdus asymbiotica |
| 44 | 1213660 | 1213929 | + | NC_012962.1 | Photorhabdus asymbiotica |
| 45 | 5341255 | 5341548 | + | NZ_CP014137.1 | Brenneria goodwinii |
| 46 | 1552507 | 1552806 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 47 | 2255131 | 2255436 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 48 | 1762713 | 1763012 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 49 | 1361979 | 1362278 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 50 | 409019 | 409312 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 51 | 2898031 | 2898306 | - | NC_015567.1 | Serratia plymuthica AS9 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000913.3
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00959.21 | 0.86 | 24 | 162 | same-strand | Phage lysozyme |
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