Result : P76231
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein YeaC |
| NCBI Accession ID | U00096.3 |
| Organism | Escherichia coli (strain K12) |
| Left | 1861702 |
| Right | 1861974 |
| Strand | - |
| Nucleotide Sequence | ATGAATCTTGATGACATTATCAACAGCATGATGCCTGAGGTATACCAGCGTTTGTCGACCGCCGTTGAACTGGGGAAATGGCCTGATGGCGTTGCGTTGACCGAGGAACAAAAAGAGAACTGCCTGCAACTGGTGATGCTGTGGCAAGCCCGCCATAATATCGAAGCACAGCATATGACAATTGACACAAATGGTCAGATGGTCATGAAGAGCAAACAGCAGTTAAAAGAAGATTTTGGTATCTCAGCAAAGCCTATTGCCATGTTTAAGTAA |
| Sequence | MNLDDIINSMMPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNIEAQHMTIDTNGQMVMKSKQQLKEDFGISAKPIAMFK |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl01215. Profile Description: Protein of unknown function (DUF1315). This family consists of several bacterial proteins of around 90 residues in length. The function of this family is unknown. |
| Pubmed ID | 9278503 16738553 |
| Domain | CDD:412792 |
| Functional Category | Others |
| Uniprot ID | P76231 |
| ORF Length (Amino Acid) | 90 |
++ More..
| Conservation Analysis |
No. of Species: 166
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1861702 | 1861974 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 2 | 1480776 | 1481048 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 3 | 2463441 | 2463713 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 4 | 2238928 | 2239200 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 5 | 1797689 | 1797961 | - | NZ_AP014857.1 | Escherichia albertii |
| 6 | 1981124 | 1981396 | + | NZ_LR134340.1 | Escherichia marmotae |
| 7 | 1370476 | 1370754 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 8 | 1372428 | 1372703 | + | NC_013716.1 | Citrobacter rodentium ICC168 |
| 9 | 1063439 | 1063714 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 10 | 2062033 | 2062308 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 11 | 3491977 | 3492252 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 12 | 3521554 | 3521829 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 13 | 282217 | 282495 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 14 | 3775593 | 3775874 | + | NZ_CP053416.1 | Salmonella bongori |
| 15 | 1014940 | 1015215 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 16 | 2687111 | 2687386 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 17 | 3169207 | 3169482 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 18 | 2015238 | 2015513 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 19 | 313083 | 313358 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 20 | 4758475 | 4758750 | + | NZ_CP033744.1 | Citrobacter freundii |
| 21 | 1710978 | 1711253 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 22 | 623202 | 623477 | + | NZ_CP038469.1 | Citrobacter tructae |
| 23 | 3466437 | 3466712 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 24 | 3602824 | 3603099 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 25 | 734698 | 734973 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 26 | 3411441 | 3411716 | - | NZ_CP050508.1 | Raoultella terrigena |
| 27 | 3300337 | 3300615 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 28 | 3129740 | 3130018 | - | NZ_CP041247.1 | Raoultella electrica |
| 29 | 1355925 | 1356203 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 30 | 2621913 | 2622191 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 31 | 2123881 | 2124159 | + | NZ_LR134475.1 | Klebsiella aerogenes |
| 32 | 3900778 | 3901056 | + | NZ_CP026047.1 | Raoultella planticola |
| 33 | 2134317 | 2134595 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 34 | 2632096 | 2632374 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 35 | 3056066 | 3056344 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 36 | 1843125 | 1843403 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 37 | 1860759 | 1861037 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 38 | 681689 | 681961 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 39 | 1628474 | 1628746 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 40 | 3262897 | 3263175 | - | NZ_CP054254.1 | Klebsiella variicola |
| 41 | 4333395 | 4333673 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 42 | 1812514 | 1812786 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 43 | 1837192 | 1837470 | + | NC_015968.1 | Enterobacter soli |
| 44 | 1993321 | 1993599 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 45 | 1080807 | 1081085 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 46 | 2093699 | 2093977 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 47 | 1877317 | 1877589 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 48 | 1821776 | 1822054 | + | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 49 | 2210207 | 2210485 | - | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 50 | 1796835 | 1797113 | + | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 51 | 2838706 | 2838984 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 52 | 2673321 | 2673599 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 53 | 2731959 | 2732210 | - | NZ_LR134201.1 | Cedecea lapagei |
| 54 | 2974867 | 2975118 | - | NZ_CP023525.1 | Cedecea neteri |
| 55 | 2372110 | 2372388 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 56 | 1792890 | 1793168 | + | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 57 | 3201779 | 3202057 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 58 | 1588329 | 1588607 | - | NZ_CP027107.1 | Cronobacter sakazakii |
| 59 | 2407928 | 2408206 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 60 | 3613287 | 3613565 | + | NZ_CP042941.1 | Atlantibacter hermannii |
| 61 | 2682462 | 2682737 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 62 | 1977100 | 1977375 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 63 | 2574421 | 2574699 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 64 | 1655563 | 1655841 | - | NZ_CP015749.1 | Pectobacterium parmentieri |
| 65 | 3899634 | 3899912 | + | NZ_CP047495.1 | Pectobacterium brasiliense |
| 66 | 2481151 | 2481429 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 67 | 1116830 | 1117108 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 68 | 2307619 | 2307897 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 69 | 285624 | 285896 | + | NZ_CP011078.1 | Yersinia ruckeri |
| 70 | 4091891 | 4092169 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 71 | 2308771 | 2309052 | - | NZ_LT615367.1 | Dickeya aquatica |
| 72 | 2542583 | 2542858 | - | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 73 | 2257816 | 2258091 | + | NZ_CP025799.1 | Dickeya zeae |
| 74 | 3445883 | 3446167 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 75 | 1844011 | 1844283 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 76 | 2375127 | 2375405 | + | NZ_CP065044.1 | Pectobacterium aroidearum |
| 77 | 2426883 | 2427155 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 78 | 2418686 | 2418979 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 79 | 2246304 | 2246579 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 80 | 2198934 | 2199182 | - | NZ_CP034148.1 | Pantoea agglomerans |
| 81 | 1875225 | 1875473 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 82 | 4469342 | 4469653 | + | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 83 | 2207915 | 2208187 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 84 | 1857654 | 1857902 | + | NZ_CP038853.1 | Pantoea vagans |
| 85 | 2277332 | 2277607 | + | NZ_CP031560.1 | Dickeya dianthicola |
| 86 | 3339234 | 3339506 | + | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 87 | 2732669 | 2732947 | - | NC_014306.1 | Erwinia billingiae Eb661 |
| 88 | 3499143 | 3499391 | + | NZ_CP019706.1 | Pantoea alhagi |
| 89 | 2168152 | 2168424 | + | NZ_CP011118.1 | Yersinia enterocolitica |
| 90 | 2342609 | 2342878 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 91 | 2384100 | 2384348 | - | NZ_CP061511.1 | Mixta calida |
| 92 | 2129286 | 2129558 | + | NZ_CP046293.1 | Yersinia intermedia |
| 93 | 2472897 | 2473169 | - | NZ_CP043727.1 | Yersinia canariae |
| 94 | 506953 | 507225 | + | NZ_CP009787.1 | Yersinia rohdei |
| 95 | 3133738 | 3134022 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 96 | 4048753 | 4049025 | + | NZ_CP007230.1 | Yersinia similis |
| 97 | 582859 | 583131 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 98 | 26126 | 26398 | - | NZ_CP014136.1 | Gibbsiella quercinecans |
| 99 | 1902206 | 1902487 | - | NZ_CP065534.1 | Lonsdalea populi |
| 100 | 2487561 | 2487809 | - | NZ_CP026377.1 | Mixta gaviniae |
| 101 | 2001974 | 2002246 | - | NZ_CP032487.1 | Yersinia hibernica |
| 102 | 4204182 | 4204454 | - | NZ_CP065640.1 | Serratia rubidaea |
| 103 | 2943477 | 2943749 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 104 | 4293957 | 4294226 | + | NZ_CP011104.1 | Photorhabdus thracensis |
| 105 | 2064437 | 2064712 | + | NZ_CP050150.1 | Hafnia alvei |
| 106 | 3000589 | 3000858 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 107 | 2978312 | 2978584 | - | NZ_LR134494.1 | Serratia quinivorans |
| 108 | 1585509 | 1585757 | - | NZ_CP028271.1 | Mixta intestinalis |
| 109 | 2957831 | 2958103 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 110 | 2202189 | 2202461 | + | NZ_CP071320.1 | Serratia ureilytica |
| 111 | 2194562 | 2194834 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 112 | 2897215 | 2897487 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 113 | 1594807 | 1595088 | - | NC_010554.1 | Proteus mirabilis HI4320 |
| 114 | 2037329 | 2037607 | - | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 115 | 3463018 | 3463290 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 116 | 2924792 | 2925064 | - | NZ_LT906479.1 | Serratia ficaria |
| 117 | 2125437 | 2125718 | - | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 118 | 650916 | 651137 | - | NZ_CP049115.1 | Pantoea stewartii |
| 119 | 3674659 | 3674940 | - | NZ_CP026364.1 | Proteus hauseri |
| 120 | 5049094 | 5049366 | - | NZ_CP011254.1 | Serratia fonticola |
| 121 | 1466653 | 1466925 | - | NZ_CP067057.1 | Rahnella aceris |
| 122 | 2135078 | 2135326 | - | NZ_LN907827.1 | Erwinia gerundensis |
| 123 | 2985517 | 2985744 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 124 | 2180067 | 2180294 | + | NZ_CP048796.1 | Providencia vermicola |
| 125 | 2127937 | 2128215 | - | NZ_CP023567.1 | Erwinia pyrifoliae |
| 126 | 2157125 | 2157343 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 127 | 2112414 | 2112698 | + | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 128 | 1773235 | 1773513 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 129 | 1350843 | 1351124 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 130 | 2056632 | 2056904 | + | NZ_CP006569.1 | Sodalis praecaptivus |
| 131 | 2202726 | 2202974 | - | NZ_CP015581.1 | Tatumella citrea |
| 132 | 2426696 | 2426971 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 133 | 1306616 | 1306885 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 134 | 2212499 | 2212768 | + | NC_012962.1 | Photorhabdus asymbiotica |
| 135 | 2944690 | 2944947 | - | NZ_CP029736.1 | Providencia rettgeri |
| 136 | 2378463 | 2378756 | - | NZ_CP071325.1 | Photobacterium ganghwense |
| 137 | 2313349 | 2313630 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 138 | 2109091 | 2109345 | + | NZ_LS483422.1 | Providencia heimbachae |
| 139 | 1054835 | 1055077 | + | NZ_CP028897.1 | Dongshaea marina |
| 140 | 1684490 | 1684720 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 141 | 1599522 | 1599803 | + | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 142 | 973527 | 973808 | + | NZ_CP039700.1 | Vibrio cyclitrophicus |
| 143 | 457327 | 457608 | - | NZ_CP065150.1 | Vibrio kanaloae |
| 144 | 961530 | 961811 | + | NC_011753.2 | Vibrio atlanticus |
| 145 | 1782480 | 1782770 | - | NZ_CP033078.1 | Vibrio zhugei |
| 146 | 2406196 | 2406486 | - | NZ_AP014635.1 | Vibrio tritonius |
| 147 | 814869 | 815153 | + | NZ_CP018312.1 | Vibrio rotiferianus |
| 148 | 2889528 | 2889812 | + | NZ_CP019959.1 | Vibrio owensii |
| 149 | 677085 | 677372 | + | NZ_AP019657.1 | Vibrio ponticus |
| 150 | 2766809 | 2767093 | + | NZ_CP046793.1 | Vibrio metschnikovii |
| 151 | 2007189 | 2007476 | - | NZ_AP019651.1 | Vibrio taketomensis |
| 152 | 1605404 | 1605661 | + | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 153 | 1360578 | 1360877 | + | NC_006512.1 | Idiomarina loihiensis L2TR |
| 154 | 779001 | 779279 | + | NZ_CP040449.1 | Aeromonas simiae |
| 155 | 1116783 | 1117064 | + | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 156 | 3514237 | 3514485 | + | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 157 | 355963 | 356253 | + | NZ_CP044399.1 | Moritella marina ATCC 15381 |
| 158 | 1023065 | 1023343 | - | NZ_AP022188.1 | Aeromonas media |
| 159 | 4192500 | 4192790 | + | NZ_LS483250.1 | Moritella yayanosii |
| 160 | 1007393 | 1007671 | - | NZ_LR134376.1 | Aeromonas encheleia |
| 161 | 1065982 | 1066230 | + | NZ_CP012621.1 | Zobellella denitrificans |
| 162 | 2465446 | 2465700 | + | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 163 | 2720243 | 2720521 | - | NZ_CP037951.1 | Parashewanella tropica |
| 164 | 2440795 | 2441046 | + | NZ_CP046378.1 | Shewanella algae |
| 165 | 3820782 | 3821021 | + | NZ_CP050851.1 | Aeromonas hydrophila |
| 166 | 4557737 | 4557976 | - | NZ_CP051883.1 | Aeromonas salmonicida |
| 167 | 2173079 | 2173318 | + | NZ_CP044060.1 | Aeromonas veronii |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LR134340.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01641.20 | 0.92 | 153 | 64.0 | same-strand | SelR domain |
| 2 | PF02800.22 | 0.99 | 164 | 810.5 | opposite-strand | Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain |
| 3 | PF00044.26 | 0.99 | 164 | 810.5 | opposite-strand | Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain |
| 4 | PF01263.22 | 0.92 | 153 | 1905.5 | opposite-strand | Aldose 1-epimerase |
| 5 | PF06629.14 | 0.7 | 116 | 3684 | same-strand | MltA-interacting protein MipA |
| 6 | PF00857.22 | 0.73 | 121 | 89 | opposite-strand | Isochorismatase family |
| 7 | PF00710.22 | 0.84 | 140 | 742.0 | opposite-strand | Asparaginase, N-terminal |
| 8 | PF17763.3 | 0.84 | 140 | 742.0 | opposite-strand | Glutaminase/Asparaginase C-terminal domain |
| 9 | PF01343.20 | 0.84 | 139 | 1925 | opposite-strand | Peptidase family S49 |
| 10 | PF00881.26 | 0.74 | 123 | 4011 | same-strand | Nitroreductase family |
++ More..