Protein Information |
Information Type | Description |
---|---|
Protein name | Putative protein RenD (Putative defective protein Ren from DLP12 prophage) |
NCBI Accession ID | U82598.1 |
Organism | Escherichia coli (strain K12) |
Left | 8693 |
Right | 8878 |
Strand | + |
Nucleotide Sequence | ATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGA |
Sequence | MARAGILVVDGKVWRTVYYRFATREEWEGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ |
Source of smORF | Swiss-Prot |
Function | |
Pubmed ID | 9278503 16738553 |
Domain | |
Functional Category | Others |
Uniprot ID | P75718 |
ORF Length (Amino Acid) | 61 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 568062 | 568247 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
2 | 1847980 | 1848165 | + | NZ_LR134340.1 | Escherichia marmotae |
3 | 1621458 | 1621643 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
4 | 2930191 | 2930364 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
5 | 31138 | 31311 | + | NZ_CP068597.1 | Paenibacillus sonchi |
6 | 213674 | 213886 | + | NZ_CP016337.1 | Kosakonia sacchari |
7 | 1298515 | 1298676 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
8 | 1705594 | 1705806 | + | NZ_LR134475.1 | Klebsiella aerogenes |
9 | 2123921 | 2124076 | + | NZ_CP045205.1 | Citrobacter telavivensis |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF04492.15 | 0.86 | 6 | 812.0 | same-strand | Bacteriophage replication protein O |
2 | PF06992.13 | 0.71 | 5 | 114.0 | same-strand | Replication protein P |