Result : P75717
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Putative uncharacterized protein ExoD |
| NCBI Accession ID | AP009048.1 |
| Organism | Escherichia coli (strain K12) |
| Left | 565321 |
| Right | 565584 |
| Strand | - |
| Nucleotide Sequence | ATGAAATTCCGGCTCGGTGGTTTCGAGGCAATAAAATCGGCTTACATGGCCCAGGTGCAGTACAGCATGTGGGTGACGCGAAAAGATGCCTGGTACTTTGCCAACTATGACCCGCGCATGAAGCGTGAAGGCCTGCATTATGTCGTGATTGAGCGGAATGAAAAGTACATGGCGAGTTTTGACGAGATGGTGCCGGAGTTCATCGAAAAAATGGACGAGGCACTGGCTGAAATTGGTTTTGTATTTGGGGAGCAATGGCGATGA |
| Sequence | MKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVIERNEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR |
| Source of smORF | Swiss-Prot |
| Function | |
| Pubmed ID | 9278503 16738553 |
| Domain | |
| Functional Category | Others |
| Uniprot ID | P75717 |
| ORF Length (Amino Acid) | 87 |
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| Conservation Analysis |
No. of Species: 11
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 566098 | 566361 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 2 | 1251981 | 1252244 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 3 | 2938432 | 2938692 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 4 | 894677 | 894940 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 5 | 1778096 | 1778359 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 6 | 1840551 | 1840814 | - | NZ_LR134340.1 | Escherichia marmotae |
| 7 | 22090 | 22353 | - | NZ_CP068597.1 | Paenibacillus sonchi |
| 8 | 2328023 | 2328286 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 9 | 204007 | 204270 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 10 | 3235688 | 3235951 | + | NZ_CP026377.1 | Mixta gaviniae |
| 11 | 1033787 | 1034050 | - | NZ_CP061511.1 | Mixta calida |
| 12 | 1194760 | 1195035 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 13 | 3450241 | 3450504 | + | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 14 | 1477705 | 1477935 | - | NZ_CP048796.1 | Providencia vermicola |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF03837.16 | 0.73 | 8 | 417.0 | same-strand | RecT family |
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