Result : P73055
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein ssr3122 |
| NCBI Accession ID | BA000022.2 |
| Organism | Synechocystis sp. (strain PCC 6803 / Kazusa) |
| Left | 554289 |
| Right | 554546 |
| Strand | + |
| Nucleotide Sequence | ATGATTAGTCTTGATCAAGTCAAACAACAAATCCAAGCCGCCCTACCTGATGCCGAAGTAATGGTCAATGACCTGGGGGGAGGGGATCACCTGGAGGCCGTGGTGGTATCTTCAGCCTTTACCGGCCAGTCCCGGGTCAAACAACATCAAATGGTCTATGGTGCCCTCAAGGATGCTTTGGCTTCGGAGGCAATCCATGCCCTGGCGCTGAAAACCTTTACTCCAGAAGCCTGGGCCGTGGCCCGGCAGACTGCTTAG |
| Sequence | MISLDQVKQQIQAALPDAEVMVNDLGGGDHLEAVVVSSAFTGQSRVKQHQMVYGALKDALASEAIHALALKTFTPEAWAVARQTA |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl00386. Profile Description: BolA-like protein. transcriptional regulator BolA; Provisional |
| Pubmed ID | 8905231 |
| Domain | CDD:412350 |
| Functional Category | Others |
| Uniprot ID | P73055 |
| ORF Length (Amino Acid) | 85 |
++ More..
| Conservation Analysis |
No. of Species: 155
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 277515 | 277772 | - | NZ_CP042326.1 | Euhalothece natronophila Z-M001 |
| 2 | 3330872 | 3331132 | - | NC_019780.1 | Dactylococcopsis salina PCC 8305 |
| 3 | 1609840 | 1610100 | - | NC_019689.1 | Pleurocapsa sp. PCC 7327 |
| 4 | 3728112 | 3728372 | - | NC_019748.1 | Stanieria cyanosphaera PCC 7437 |
| 5 | 4293795 | 4294046 | - | NC_010296.1 | Microcystis aeruginosa NIES-843 |
| 6 | 2125709 | 2125963 | + | NC_019776.1 | Cyanobacterium aponinum PCC 10605 |
| 7 | 2339663 | 2339923 | + | NC_014501.1 | Gloeothece verrucosa PCC 7822 |
| 8 | 5839380 | 5839640 | + | NC_011729.1 | Gloeothece citriformis PCC 7424 |
| 9 | 6489793 | 6490053 | + | NC_019729.1 | Oscillatoria nigro-viridis PCC 7112 |
| 10 | 3374574 | 3374834 | - | NC_019753.1 | Crinalium epipsammum PCC 9333 |
| 11 | 6076095 | 6076355 | - | NC_019695.1 | Chroococcidiopsis thermalis PCC 7203 |
| 12 | 2726121 | 2726381 | - | NZ_CP021983.2 | Halomicronema hongdechloris C2206 |
| 13 | 1255483 | 1255746 | + | NC_019693.1 | Oscillatoria acuminata PCC 6304 |
| 14 | 4928378 | 4928635 | - | NC_010628.1 | Nostoc punctiforme PCC 73102 |
| 15 | 2923452 | 2923709 | + | NZ_CP054698.1 | Nostoc edaphicum CCNP1411 |
| 16 | 4293997 | 4294254 | + | NC_019751.1 | Calothrix sp. PCC 6303 |
| 17 | 2327246 | 2327491 | - | NZ_AP014638.1 | Leptolyngbya boryana IAM M-101 |
| 18 | 5494527 | 5494784 | + | NZ_CP031941.1 | Nostoc sphaeroides |
| 19 | 4151464 | 4151721 | + | NZ_CP024785.1 | Nostoc flagelliforme CCNUN1 |
| 20 | 1068311 | 1068562 | + | NZ_AP018202.1 | Thermostichus vulcanus NIES-2134 |
| 21 | 890374 | 890625 | - | NC_004113.1 | Thermosynechococcus vestitus BP-1 |
| 22 | 2037644 | 2037886 | + | NZ_CP047242.1 | Trichormus variabilis 0441 |
| 23 | 2869190 | 2869426 | + | NC_014248.1 | 'Nostoc azollae' 0708 |
| 24 | 2797946 | 2798182 | + | NC_019771.1 | Anabaena cylindrica PCC 7122 |
| 25 | 862294 | 862551 | + | NZ_CP018092.1 | Synechococcus lividus PCC 6715 |
| 26 | 4942586 | 4942858 | - | NC_009925.1 | Acaryochloris marina MBIC11017 |
| 27 | 900156 | 900389 | - | NC_019675.1 | Cyanobium gracile PCC 6307 |
| 28 | 4283416 | 4283682 | + | NZ_CP012332.1 | Vulgatibacter incomptus |
| 29 | 1008319 | 1008549 | - | NC_005042.1 | Prochlorococcus marinus subsp. marinus str. CCMP1375 |
| 30 | 3439963 | 3440193 | + | NZ_CP060822.1 | Cylindrospermopsis curvispora GIHE-G1 |
| 31 | 628212 | 628454 | - | NZ_AP018907.1 | Blastochloris tepida |
| 32 | 1125631 | 1125879 | - | NZ_CP012946.1 | Blastochloris viridis |
| 33 | 6435756 | 6436013 | + | NZ_CP022163.1 | Melittangium boletus DSM 14713 |
| 34 | 1608943 | 1609170 | - | NC_023065.1 | Magnetospirillum gryphiswaldense MSR-1 v2 |
| 35 | 2435961 | 2436218 | + | NC_017030.1 | Corallococcus coralloides DSM 2259 |
| 36 | 3454681 | 3454935 | + | NZ_CP011125.1 | Sandaracinus amylolyticus |
| 37 | 1636213 | 1636455 | + | NZ_AP021881.1 | Sulfuriferula nivalis |
| 38 | 5563397 | 5563624 | - | NZ_CP022219.1 | Bradyrhizobium guangxiense |
| 39 | 4327867 | 4328073 | - | NZ_CP022219.1 | Bradyrhizobium guangxiense |
| 40 | 4693167 | 4693394 | - | NC_017082.1 | Bradyrhizobium cosmicum |
| 41 | 2659982 | 2660188 | + | NC_017082.1 | Bradyrhizobium cosmicum |
| 42 | 3026500 | 3026727 | - | NZ_CP053923.1 | Defluviicoccus vanus |
| 43 | 3300383 | 3300619 | - | NZ_CP053073.1 | Usitatibacter palustris |
| 44 | 882006 | 882233 | - | NZ_CP024199.1 | Thalassospira marina |
| 45 | 2341316 | 2341543 | + | NZ_CP041025.1 | Paremcibacter congregatus |
| 46 | 286065 | 286313 | + | NC_012969.1 | Methylovorus glucosetrophus SIP3-4 |
| 47 | 208363 | 208590 | + | NZ_CP029426.1 | Bradyrhizobium amphicarpaeae |
| 48 | 4376435 | 4376641 | - | NZ_CP029426.1 | Bradyrhizobium amphicarpaeae |
| 49 | 1689679 | 1689906 | - | NC_015259.1 | Polymorphum gilvum SL003B-26A1 |
| 50 | 2552987 | 2553214 | + | NC_009937.1 | Azorhizobium caulinodans ORS 571 |
| 51 | 1662149 | 1662376 | + | NZ_CP042304.1 | Devosia ginsengisoli |
| 52 | 1717966 | 1718193 | + | NZ_CP029176.1 | Acidibrevibacterium fodinaquatile |
| 53 | 2715660 | 2715887 | + | NZ_CP044117.1 | Roseomonas mucosa |
| 54 | 1236259 | 1236483 | - | NZ_CP041636.1 | Ferrovibrio terrae |
| 55 | 797198 | 797425 | - | NZ_CP004388.1 | Thalassospira xiamenensis M-5 = DSM 17429 |
| 56 | 2822480 | 2822707 | - | NZ_LT960614.1 | Hartmannibacter diazotrophicus |
| 57 | 2317406 | 2317654 | + | NC_022600.1 | Gloeobacter kilaueensis JS1 |
| 58 | 194046 | 194252 | - | NZ_CP017147.1 | Bosea vaviloviae |
| 59 | 3608667 | 3608894 | + | NZ_CP020330.1 | Martelella mediterranea DSM 17316 |
| 60 | 882118 | 882324 | - | NZ_CP029553.1 | Methylobacterium terrae |
| 61 | 2789100 | 2789330 | - | NC_009719.1 | Parvibaculum lavamentivorans DS-1 |
| 62 | 286279 | 286485 | - | NZ_CP029550.1 | Methylobacterium durans |
| 63 | 1711402 | 1711629 | - | NZ_CP062147.1 | Komagataeibacter hansenii |
| 64 | 935678 | 935914 | - | NZ_CP014671.1 | Immundisolibacter cernigliae |
| 65 | 5454585 | 5454794 | - | NC_020453.1 | Bradyrhizobium oligotrophicum S58 |
| 66 | 2620882 | 2621109 | + | NC_020453.1 | Bradyrhizobium oligotrophicum S58 |
| 67 | 2513755 | 2513985 | + | NC_017956.1 | Tistrella mobilis KA081020-065 |
| 68 | 2520841 | 2521071 | - | NZ_CP026100.1 | Caulobacter flavus |
| 69 | 13793 | 13999 | + | NZ_CP039546.1 | Methylorubrum populi |
| 70 | 5268886 | 5269092 | + | NZ_CP043538.1 | Methylobacterium mesophilicum SR1.6/6 |
| 71 | 3258059 | 3258286 | - | NZ_CP010836.1 | Sphingomonas hengshuiensis |
| 72 | 2729017 | 2729271 | + | NC_011761.1 | Acidithiobacillus ferrooxidans ATCC 23270 |
| 73 | 819276 | 819512 | + | NZ_CP022048.2 | Brevundimonas vesicularis |
| 74 | 1865879 | 1866103 | - | NZ_AP019700.1 | Stella humosa |
| 75 | 1316068 | 1316295 | + | NZ_CP009291.1 | Novosphingobium pentaromativorans US6-1 |
| 76 | 2031559 | 2031789 | + | NZ_CP016616.1 | Microvirga ossetica |
| 77 | 2945069 | 2945296 | - | NZ_CP010803.1 | Martelella endophytica |
| 78 | 1606264 | 1606509 | + | NZ_CP045434.1 | Sphingomonas ginsengisoli An et al. 2013 |
| 79 | 1647376 | 1647606 | + | NZ_CP071057.1 | Marinicauda algicola |
| 80 | 1691177 | 1691383 | + | NZ_CP058907.1 | Rhodopseudomonas palustris |
| 81 | 2398878 | 2399111 | - | NZ_CP018799.1 | Mariprofundus aestuarium |
| 82 | 2076455 | 2076679 | - | NZ_CP018911.1 | Glycocaulis alkaliphilus |
| 83 | 1351482 | 1351709 | - | NZ_CP017940.1 | Phyllobacterium zundukense |
| 84 | 1601326 | 1601553 | + | NZ_CP015880.1 | Ensifer adhaerens |
| 85 | 3522834 | 3523061 | + | NZ_CP018171.1 | Mesorhizobium oceanicum |
| 86 | 811580 | 811807 | - | NC_010103.1 | Brucella canis ATCC 23365 |
| 87 | 813216 | 813443 | - | NC_004310.3 | Brucella suis 1330 |
| 88 | 837811 | 838038 | - | NC_009505.1 | Brucella ovis ATCC 25840 |
| 89 | 817378 | 817605 | - | NC_013119.1 | Brucella microti CCM 4915 |
| 90 | 1172196 | 1172423 | + | NC_003317.1 | Brucella melitensis bv. 1 str. 16M |
| 91 | 1173326 | 1173553 | + | NC_022905.1 | Brucella ceti TE10759-12 |
| 92 | 831195 | 831422 | - | NC_007618.1 | Brucella abortus 2308 |
| 93 | 1896552 | 1896779 | + | NZ_LT605585.1 | Brucella inopinata |
| 94 | 1129257 | 1129499 | - | NZ_CP013002.1 | Caulobacter henricii |
| 95 | 993295 | 993522 | - | NZ_CP064063.1 | Brucella anthropi |
| 96 | 242795 | 243028 | + | NZ_CP012401.1 | Azospirillum thiophilum |
| 97 | 131158 | 131385 | - | NZ_CP039690.1 | Phreatobacter stygius |
| 98 | 2679435 | 2679641 | + | NZ_CP030053.1 | Bradyrhizobium guangzhouense |
| 99 | 743348 | 743554 | - | NZ_CP045423.1 | Microvirga thermotolerans |
| 100 | 5402603 | 5402809 | + | NZ_CP029425.1 | Bradyrhizobium ottawaense |
| 101 | 4819281 | 4819487 | + | NZ_CP050066.1 | Bradyrhizobium symbiodeficiens |
| 102 | 3844173 | 3844403 | + | NZ_CP048815.1 | Caulobacter rhizosphaerae |
| 103 | 2102531 | 2102758 | - | NZ_CP027668.1 | Phreatobacter cathodiphilus |
| 104 | 255267 | 255518 | + | NC_007947.1 | Methylobacillus flagellatus KT |
| 105 | 1043220 | 1043444 | + | NZ_CP053708.1 | Lichenicola cladoniae |
| 106 | 846580 | 846807 | - | NC_016027.1 | Komagataeibacter medellinensis NBRC 3288 |
| 107 | 2723345 | 2723572 | - | NC_007794.1 | Novosphingobium aromaticivorans DSM 12444 |
| 108 | 6216696 | 6216902 | - | NZ_CP032617.1 | Bradyrhizobium diazoefficiens |
| 109 | 5946416 | 5946622 | - | NZ_CP058354.1 | Bradyrhizobium japonicum |
| 110 | 2678035 | 2678262 | + | NZ_CP071678.1 | Rhizobium ruizarguesonis |
| 111 | 3162157 | 3162363 | + | NZ_LS398110.1 | Bradyrhizobium vignae |
| 112 | 6646380 | 6646586 | - | NZ_CP030050.1 | Bradyrhizobium arachidis |
| 113 | 1860169 | 1860390 | + | NZ_CP029353.1 | Azospirillum thermophilum |
| 114 | 363479 | 363709 | - | NC_014664.1 | Rhodomicrobium vannielii ATCC 17100 |
| 115 | 2059168 | 2059395 | + | NZ_CP006877.1 | Rhizobium gallicum bv. gallicum R602sp |
| 116 | 1840886 | 1841095 | + | NC_016026.1 | Micavibrio aeruginosavorus ARL-13 |
| 117 | 2223331 | 2223567 | - | NZ_CP016545.1 | Paraurantiacibacter namhicola |
| 118 | 3876365 | 3876580 | + | NZ_CP022221.1 | Bradyrhizobium zhanjiangense |
| 119 | 424038 | 424271 | - | NZ_CP029829.1 | Azospirillum ramasamyi |
| 120 | 1266600 | 1266827 | - | NZ_CP051131.1 | Parasphingopyxis algicola |
| 121 | 3172236 | 3172442 | + | NZ_CP030051.1 | Bradyrhizobium guangdongense |
| 122 | 1604757 | 1604984 | - | NZ_CP053086.1 | Pelagibacterium halotolerans |
| 123 | 1875968 | 1876195 | + | NZ_CP029451.1 | Sinorhizobium fredii CCBAU 25509 |
| 124 | 5766215 | 5766421 | + | NZ_CP044543.1 | Bradyrhizobium betae |
| 125 | 2672 | 2899 | - | NZ_CP011452.2 | Croceibacterium atlanticum |
| 126 | 2414986 | 2415219 | + | NZ_CP054619.1 | Azospirillum oryzae |
| 127 | 2392428 | 2392655 | + | NZ_CP013500.1 | Rhizobium esperanzae |
| 128 | 2076369 | 2076596 | - | NZ_CP054027.1 | Rhizobium hidalgonense |
| 129 | 1989993 | 1990220 | + | NZ_CP013107.1 | Sinorhizobium americanum |
| 130 | 1923110 | 1923337 | + | NC_020528.1 | Sinorhizobium meliloti 2011 |
| 131 | 2441568 | 2441795 | + | NZ_CP071604.1 | Rhizobium binae |
| 132 | 1558478 | 1558705 | + | NZ_CP061003.1 | Agrobacterium tumefaciens |
| 133 | 143475 | 143702 | - | NZ_CP048632.1 | Rhizobium oryzihabitans |
| 134 | 1949413 | 1949640 | + | NZ_CP034998.1 | Rhizobium acidisoli |
| 135 | 2148914 | 2149141 | + | NZ_CP041238.1 | Ensifer mexicanus |
| 136 | 1466660 | 1466887 | + | NZ_CP053856.1 | Rhizobium pusense |
| 137 | 2126273 | 2126500 | + | NZ_CP036532.1 | Roseitalea porphyridii |
| 138 | 1975599 | 1975826 | + | NC_020059.1 | Rhizobium tropici CIAT 899 |
| 139 | 2281467 | 2281694 | + | NZ_CP032694.1 | Rhizobium jaguaris |
| 140 | 1339834 | 1340061 | - | NZ_CP059896.1 | Ciceribacter thiooxidans |
| 141 | 110530 | 110757 | - | NZ_CP054021.1 | Rhizobium indicum |
| 142 | 4280378 | 4280605 | + | NZ_CP071454.1 | Rhizobium lentis |
| 143 | 2294307 | 2294534 | + | NZ_CP020906.1 | Rhizobium etli |
| 144 | 4040340 | 4040564 | + | NZ_CP042582.1 | Hypericibacter adhaerens |
| 145 | 2849032 | 2849259 | - | NZ_CP049241.1 | Rhizobium pseudoryzae |
| 146 | 2346071 | 2346298 | + | NZ_CP071612.1 | Rhizobium bangladeshense |
| 147 | 1232151 | 1232375 | - | NZ_CP019948.1 | Methylocystis bryophila |
| 148 | 1611366 | 1611596 | - | NZ_CP021330.1 | Maritalea myrionectae |
| 149 | 1420529 | 1420750 | + | NC_019964.1 | Halovivax ruber XH-70 |
| 150 | 2734441 | 2734668 | + | NZ_CP061205.1 | Kordiimonas pumila |
| 151 | 1677460 | 1677690 | - | NZ_HG938353.1 | Neorhizobium galegae bv. orientalis str. HAMBI 540 |
| 152 | 1658458 | 1658679 | - | NC_019974.1 | Natronococcus occultus SP4 |
| 153 | 1606333 | 1606542 | - | NZ_CP029556.1 | Lysobacter oculi |
| 154 | 1823521 | 1823748 | + | NZ_FO082820.1 | Pseudorhizobium banfieldiae |
| 155 | 1395182 | 1395436 | - | NZ_AP018558.1 | Hydrogenophilus thermoluteolus |
| 156 | 3764471 | 3764716 | - | NC_019792.1 | Natronobacterium gregoryi SP2 |
| 157 | 3619536 | 3619763 | - | NZ_CP023449.1 | Rhizorhabdus dicambivorans |
| 158 | 2468227 | 2468469 | - | NZ_CP046570.1 | Xanthomonas albilineans |
| 159 | 2346590 | 2346814 | - | NZ_CP009571.1 | Sphingomonas taxi |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP042326.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00462.26 | 0.88 | 136 | 113 | same-strand | Glutaredoxin |
++ More..