Protein Information |
Information Type | Description |
---|---|
Protein name | Uncharacterized protein YvfG |
NCBI Accession ID | Z71928.1 |
Organism | Bacillus subtilis (strain 168) |
Left | 18128 |
Right | 18346 |
Strand | - |
Nucleotide Sequence | ATGTCTGAACTTTTTTCCGTCCCTTATTTTATTGAGAATTTAAAACAGCATATTGAAATGAATCAGTCTGAGGATAAAATCCACGCGATGAACAGCTACTACCGTTCCGTCGTCTCAACACTAGTGCAGGACCAGCTGACGAAAAACGCAGTTGTCCTGAAACGGATTCAGCATTTAGATGAAGCATACAACAAAGTCAAACGTGGAGAATCAAAATAA |
Sequence | MSELFSVPYFIENLKQHIEMNQSEDKIHAMNSYYRSVVSTLVQDQLTKNAVVLKRIQHLDEAYNKVKRGESK |
Source of smORF | Swiss-Prot |
Function | The ORF matches to the profile of pfam09628. Profile Description: YvfG protein. Yvfg is a hypothetical protein of 71 residues expressed in some bacteria. The monomer consists of two parallel alpha helices, and the protein crystallizes as a homo-dimer. |
Pubmed ID | 8969506 9384377 |
Domain | CDD:401531 |
Functional Category | Others |
Uniprot ID | P71066 |
ORF Length (Amino Acid) | 72 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 3331255 | 3331473 | + | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
2 | 3513887 | 3514105 | + | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
3 | 3380330 | 3380548 | + | NZ_CP033052.1 | Bacillus vallismortis |
4 | 3335362 | 3335580 | + | NZ_CP048852.1 | Bacillus tequilensis |
5 | 3380567 | 3380785 | + | NZ_CP013984.1 | Bacillus inaquosorum |
6 | 3307819 | 3308037 | + | NZ_CP051464.1 | Bacillus mojavensis |
7 | 2727283 | 2727501 | - | NZ_CP029364.1 | Bacillus halotolerans |
8 | 655686 | 655904 | - | NZ_CP011937.1 | Bacillus velezensis |
9 | 3396772 | 3396990 | + | NZ_CP053376.1 | Bacillus amyloliquefaciens |
10 | 3923182 | 3923394 | + | NZ_LT603683.1 | Bacillus glycinifermentans |
11 | 3700502 | 3700717 | + | NZ_CP023665.1 | Bacillus paralicheniformis |
12 | 3506822 | 3507037 | + | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
13 | 3083450 | 3083665 | + | NZ_CP011150.1 | Bacillus altitudinis |
14 | 2223296 | 2223511 | - | NZ_CP043404.1 | Bacillus safensis |
15 | 2271642 | 2271857 | - | NZ_CP017786.1 | Bacillus xiamenensis |
16 | 1817821 | 1818036 | - | NZ_CP017703.1 | Aeribacillus pallidus |
17 | 3354681 | 3354896 | + | NZ_CP015378.1 | Fictibacillus phosphorivorans |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF07729.14 | 0.88 | 15 | 3317 | opposite-strand | FCD domain |
2 | PF00392.23 | 0.88 | 15 | 3317 | opposite-strand | Bacterial regulatory proteins, gntR family |
3 | PF14502.8 | 0.88 | 15 | 3317 | opposite-strand | Helix-turn-helix domain |
4 | PF02652.16 | 0.71 | 12 | 1417.5 | same-strand | L-lactate permease |
5 | PF04552.15 | 1.0 | 17 | 78 | opposite-strand | Sigma-54, DNA binding domain |
6 | PF04963.15 | 1.0 | 17 | 78 | opposite-strand | Sigma-54 factor, core binding domain |
7 | PF00309.22 | 1.0 | 17 | 78 | opposite-strand | Sigma-54 factor, Activator interacting domain (AID) |
8 | PF04230.15 | 0.76 | 13 | 11 | opposite-strand | Polysaccharide pyruvyl transferase |
9 | PF01041.19 | 0.76 | 13 | 957 | opposite-strand | DegT/DnrJ/EryC1/StrS aminotransferase family |
10 | PF17836.3 | 0.76 | 13 | 2140 | opposite-strand | PglD N-terminal domain |
11 | PF00132.26 | 0.65 | 11 | 2140 | opposite-strand | Bacterial transferase hexapeptide (six repeats) |
12 | PF02397.18 | 0.76 | 13 | 2775 | opposite-strand | Bacterial sugar transferase |
13 | PF01943.19 | 0.76 | 13 | 3380 | opposite-strand | Polysaccharide biosynthesis protein |
14 | PF14667.8 | 0.71 | 12 | 3380.5 | opposite-strand | Polysaccharide biosynthesis C-terminal domain |