Protein Information |
Information Type | Description |
---|---|
Protein name | Uncharacterized protein BBD22 |
NCBI Accession ID | U43414.1 |
Organism | Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) |
Left | 14100 |
Right | 14369 |
Strand | + |
Nucleotide Sequence | ATGCCTATAAGCAAAGAGGTTAATTTAGAAGAAATTATTAAACAAAATGTTAGCAAATCTAAATTTGCTTTTCGTGATAATGATGTTATTAGCAATAACATTCCAAATGTTAAGCCTATTAGATCAAAAATGACGATCAAGCAAATAAGTGTAGGACTGAAATATGAATATTGGATTGAATTTTATTCTATTTTAGACAAAAAGGGATTAACAGCTTCTGGTTTTATAAGAACTTTAATTATGGAATATATAGAAGCTTCTAAAAAATAA |
Sequence | MPISKEVNLEEIIKQNVSKSKFAFRDNDVISNNIPNVKPIRSKMTIKQISVGLKYEYWIEFYSILDKKGLTASGFIRTLIMEYIEASKK |
Source of smORF | Swiss-Prot |
Function | |
Pubmed ID | 8932323 9403685 |
Domain | |
Functional Category | Others |
Uniprot ID | P70844 |
ORF Length (Amino Acid) | 89 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 21964 | 22233 | + | NC_015915.1 | Borreliella bissettii DN127 |
2 | 20820 | 21092 | + | NZ_CP015803.1 | Borreliella mayonii |
3 | 1477 | 1749 | - | NZ_CP044540.1 | Borrelia maritima |
4 | 19215 | 19490 | + | NZ_CP028866.1 | Borreliella garinii |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF13614.8 | 0.75 | 3 | -9 | same-strand | AAA domain |
2 | PF01656.25 | 0.75 | 3 | -9 | same-strand | CobQ/CobB/MinD/ParA nucleotide binding domain |