Result : P70844
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein BBD22 |
| NCBI Accession ID | U43414.1 |
| Organism | Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) |
| Left | 14100 |
| Right | 14369 |
| Strand | + |
| Nucleotide Sequence | ATGCCTATAAGCAAAGAGGTTAATTTAGAAGAAATTATTAAACAAAATGTTAGCAAATCTAAATTTGCTTTTCGTGATAATGATGTTATTAGCAATAACATTCCAAATGTTAAGCCTATTAGATCAAAAATGACGATCAAGCAAATAAGTGTAGGACTGAAATATGAATATTGGATTGAATTTTATTCTATTTTAGACAAAAAGGGATTAACAGCTTCTGGTTTTATAAGAACTTTAATTATGGAATATATAGAAGCTTCTAAAAAATAA |
| Sequence | MPISKEVNLEEIIKQNVSKSKFAFRDNDVISNNIPNVKPIRSKMTIKQISVGLKYEYWIEFYSILDKKGLTASGFIRTLIMEYIEASKK |
| Source of smORF | Swiss-Prot |
| Function | |
| Pubmed ID | 8932323 9403685 |
| Domain | |
| Functional Category | Others |
| Uniprot ID | P70844 |
| ORF Length (Amino Acid) | 89 |
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| Conservation Analysis |
No. of Species: 4
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 21964 | 22233 | + | NC_015915.1 | Borreliella bissettii DN127 |
| 2 | 20820 | 21092 | + | NZ_CP015803.1 | Borreliella mayonii |
| 3 | 1477 | 1749 | - | NZ_CP044540.1 | Borrelia maritima |
| 4 | 19215 | 19490 | + | NZ_CP028866.1 | Borreliella garinii |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP015803.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF13614.8 | 0.75 | 3 | -9 | same-strand | AAA domain |
| 2 | PF01656.25 | 0.75 | 3 | -9 | same-strand | CobQ/CobB/MinD/ParA nucleotide binding domain |
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