Result : P68661
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Putative nuclease YbcO (EC 3.1.-.-) |
| NCBI Accession ID | X92587.1 |
| Organism | Escherichia coli (strain K12) |
| Left | 850 |
| Right | 1140 |
| Strand | + |
| Nucleotide Sequence | ATGGCTGATTTGAGAAAAGCAGCGCGTGGTCGGGAATGCCAGGTAAGAATCCCTGGCGTATGTAATGGCAACCCTGAAACGTCTGTACTGGCACATATCCGGCTGACTGGATTGTGCGGCACCGGTACGAAACCGCCAGACCTGATTGCCACCATTGCATGTTCTGCCTGCCACGACGAAATCGACCGCCGCACGCATTTTGTTGACGCTGGATATGCAAAAGAATGCGCGCTGGAAGGTATGGCGAGAACACAGGTTATCTGGCTGAAAGAGGGGGTTATTAAGGCGTGA |
| Sequence | MADLRKAARGRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTKPPDLIATIACSACHDEIDRRTHFVDAGYAKECALEGMARTQVIWLKEGVIKA |
| Source of smORF | Swiss-Prot |
| Function | Based on its fold and a conserved His residue, has been predicted to be a nuclease. {ECO:0000305|Pubmed:27562564}. |
| Pubmed ID | 8648624 9278503 16738553 27562564 |
| Domain | CDD:377777 |
| Functional Category | Metal-binding |
| Uniprot ID | P68661 |
| ORF Length (Amino Acid) | 96 |
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| Conservation Analysis |
No. of Species: 47
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 573084 | 573374 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 2 | 1624934 | 1625224 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 3 | 1939724 | 1940014 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 4 | 1853001 | 1853291 | + | NZ_LR134340.1 | Escherichia marmotae |
| 5 | 3026897 | 3027187 | - | NZ_LR134340.1 | Escherichia marmotae |
| 6 | 2330774 | 2331064 | - | NZ_LR134340.1 | Escherichia marmotae |
| 7 | 1767941 | 1768231 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 8 | 1364795 | 1365085 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 9 | 2449392 | 2449682 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 10 | 2651443 | 2651733 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 11 | 3565009 | 3565299 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 12 | 2670992 | 2671282 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 13 | 3048112 | 3048399 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 14 | 365082 | 365369 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 15 | 604567 | 604857 | - | NZ_CP026364.1 | Proteus hauseri |
| 16 | 213516 | 213806 | - | NZ_CP026364.1 | Proteus hauseri |
| 17 | 3889452 | 3889742 | - | NZ_CP029736.1 | Providencia rettgeri |
| 18 | 3024489 | 3024779 | - | NZ_CP032487.1 | Yersinia hibernica |
| 19 | 1522101 | 1522385 | + | NZ_CP032487.1 | Yersinia hibernica |
| 20 | 334795 | 335085 | + | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 21 | 1348994 | 1349284 | + | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 22 | 541061 | 541351 | + | NC_010554.1 | Proteus mirabilis HI4320 |
| 23 | 1599002 | 1599292 | - | NZ_CP029822.1 | Entomomonas moraniae |
| 24 | 1316527 | 1316817 | - | NZ_CP029822.1 | Entomomonas moraniae |
| 25 | 626986 | 627270 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 26 | 1277556 | 1277840 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 27 | 1480398 | 1480688 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 28 | 3261450 | 3261743 | + | NZ_CP019706.1 | Pantoea alhagi |
| 29 | 1041850 | 1042131 | + | NZ_CP028271.1 | Mixta intestinalis |
| 30 | 1687869 | 1688156 | - | NZ_CP028271.1 | Mixta intestinalis |
| 31 | 3513198 | 3513488 | - | NZ_LR134201.1 | Cedecea lapagei |
| 32 | 2116479 | 2116769 | - | NZ_LR134201.1 | Cedecea lapagei |
| 33 | 2705290 | 2705574 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 34 | 3088764 | 3089057 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 35 | 907648 | 907944 | + | NZ_CP059567.1 | Neisseria shayeganii |
| 36 | 1342994 | 1343287 | + | NZ_LR134531.1 | Pragia fontium |
| 37 | 2932700 | 2932987 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 38 | 2467576 | 2467872 | + | NZ_CP050508.1 | Raoultella terrigena |
| 39 | 1892315 | 1892599 | - | NZ_CP067057.1 | Rahnella aceris |
| 40 | 1290907 | 1291140 | + | NZ_CP009365.1 | Pseudomonas soli |
| 41 | 2766729 | 2767025 | + | NZ_CP060111.1 | Klebsiella michiganensis |
| 42 | 1459390 | 1459674 | + | NZ_CP061280.1 | Mannheimia bovis |
| 43 | 1399944 | 1400234 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 44 | 903199 | 903489 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 45 | 554401 | 554694 | + | NZ_CP007446.1 | Snodgrassella alvi wkB2 |
| 46 | 2075038 | 2075331 | - | NZ_CP007446.1 | Snodgrassella alvi wkB2 |
| 47 | 4312688 | 4312981 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 48 | 3212333 | 3212578 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 49 | 1840419 | 1840703 | + | NZ_CP048784.1 | Serratia liquefaciens |
| 50 | 3059782 | 3060072 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 51 | 812573 | 812860 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 52 | 3245654 | 3245896 | - | NZ_CP050150.1 | Hafnia alvei |
| 53 | 1716454 | 1716699 | - | NZ_LS483443.1 | Aggregatibacter segnis ATCC 33393 |
| 54 | 1535832 | 1536128 | - | NZ_CP019448.1 | Simonsiella muelleri ATCC 29453 |
| 55 | 1125440 | 1125685 | - | NZ_CP049115.1 | Pantoea stewartii |
| 56 | 3659183 | 3659470 | + | NZ_CP065640.1 | Serratia rubidaea |
| 57 | 3010396 | 3010683 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 58 | 4477570 | 4477863 | - | NZ_CP007230.1 | Yersinia similis |
| 59 | 1358546 | 1358794 | + | NZ_CP011036.1 | Pseudoalteromonas nigrifaciens |
| 60 | 1920828 | 1921118 | + | NZ_CP009533.1 | Pseudomonas rhizosphaerae |
| 61 | 1560056 | 1560352 | + | NZ_CP027756.1 | Pseudomonas synxantha |
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