Protein Information |
Information Type | Description |
---|---|
Protein name | Uncharacterized protein Mb2339 |
NCBI Accession ID | LT708304.1 |
Organism | Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) |
Left | 2566492 |
Right | 2566761 |
Strand | + |
Nucleotide Sequence | ATGATGAAGGAGATCGAGCTCCATCTGGTTGACGCTGCCGCCCCCAGCGGCGAGATTGCGATCAAGGACCTAGCCGCCCTCGCGACTGCTCTGCAGGAATTGACGACTCGAATCAGCCGCGACCCAATCAACACGCCCGGGCCTGGTCGCACAAAACAGTTTATGGAAGAGCTCTCGCAACTGGCCAGCGCCCCCGGGCCAGACATCGACGGCGGGATCGACCTAACTGACGATGAATTCCAGGCGTTTCTTCAGGCGGCGCGTTCGTGA |
Sequence | MMKEIELHLVDAAAPSGEIAIKDLAALATALQELTTRISRDPINTPGPGRTKQFMEELSQLASAPGPDIDGGIDLTDDEFQAFLQAARS |
Source of smORF | Swiss-Prot |
Function | |
Pubmed ID | 12788972 28385856 |
Domain | |
Functional Category | Others |
Uniprot ID | P64992 |
ORF Length (Amino Acid) | 89 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 2584486 | 2584755 | + | NC_000962.3 | Mycobacterium tuberculosis H37Rv |
2 | 2641593 | 2641862 | + | NC_015848.1 | Mycobacterium canettii CIPT 140010059 |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF12728.9 | 1.0 | 2 | 706.5 | same-strand | Helix-turn-helix domain |
2 | PF19289.1 | 1.0 | 2 | 1847.0 | opposite-strand | PmbA/TldA metallopeptidase C-terminal domain |
3 | PF00528.24 | 1.0 | 2 | 4512.5 | same-strand | Binding-protein-dependent transport system inner membrane component |