* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000962.3
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00183.20
|
1.0
|
2
|
3014.5
|
same-strand
|
Hsp90 protein
|
2
|
PF02518.28
|
1.0
|
2
|
3014.5
|
same-strand
|
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
|
3
|
PF00753.29
|
1.0
|
2
|
2122.5
|
same-strand
|
Metallo-beta-lactamase superfamily
|
4
|
PF01083.24
|
1.0
|
2
|
1309.5
|
opposite-strand
|
Cutinase
|
5
|
PF08940.13
|
1.0
|
2
|
961.5
|
opposite-strand
|
Domain of unknown function (DUF1918)
|
6
|
PF04909.16
|
1.0
|
2
|
-3.0
|
same-strand
|
Amidohydrolase
|
++ More..