ProsmORF-pred
Result : P64986
Protein Information
Information Type Description
Protein name Uncharacterized protein Mb2326c
NCBI Accession ID LT708304.1
Organism Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Left 2557022
Right 2557231
Strand -
Nucleotide Sequence ATGAGCCACGACATTGCTACCGAGGAAGCCGACGACGGCGCGCTGGACCGTTGTGTCCTGTGCGACCTCACCGGGAAGCGAGTCGATGTCAAGGAGGCGACGTGCACCGGCCGCCCCGCCACGACGTTCGAGCAGGCATTCGCCGTGGAGCGCGATGCCGGATTCGATGACTTCCTGCACGGTCCGGTTGGCCCGCGGAGCACCCCATGA
Sequence MSHDIATEEADDGALDRCVLCDLTGKRVDVKEATCTGRPATTFEQAFAVERDAGFDDFLHGPVGPRSTP
Source of smORF Swiss-Prot
Function
Pubmed ID 12788972 28385856
Domain
Functional Category Others
Uniprot ID P64986
ORF Length (Amino Acid) 69
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Conservation Analysis
Conservation Analysis
No. of Species: 2
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 2575016 2575225 - NC_000962.3 Mycobacterium tuberculosis H37Rv
2 2632122 2632331 - NC_015848.1 Mycobacterium canettii CIPT 140010059
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_000962.3
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00183.20 1.0 2 3014.5 same-strand Hsp90 protein
2 PF02518.28 1.0 2 3014.5 same-strand Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
3 PF00753.29 1.0 2 2122.5 same-strand Metallo-beta-lactamase superfamily
4 PF01083.24 1.0 2 1309.5 opposite-strand Cutinase
5 PF08940.13 1.0 2 961.5 opposite-strand Domain of unknown function (DUF1918)
6 PF04909.16 1.0 2 -3.0 same-strand Amidohydrolase
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