* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_017379.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF03255.16
|
1.0
|
2
|
1759.0
|
same-strand
|
Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
|
2
|
PF00109.28
|
1.0
|
2
|
497.5
|
same-strand
|
Beta-ketoacyl synthase, N-terminal domain
|
3
|
PF02801.24
|
1.0
|
2
|
497.5
|
same-strand
|
Beta-ketoacyl synthase, C-terminal domain
|
4
|
PF00550.27
|
1.0
|
2
|
51.0
|
same-strand
|
Phosphopantetheine attachment site
|
5
|
PF13561.8
|
1.0
|
2
|
93.0
|
same-strand
|
Enoyl-(Acyl carrier protein) reductase
|
6
|
PF00106.27
|
1.0
|
2
|
93.0
|
same-strand
|
short chain dehydrogenase
|
7
|
PF08659.12
|
1.0
|
2
|
93.0
|
same-strand
|
KR domain
|
8
|
PF01165.22
|
1.0
|
2
|
871.5
|
same-strand
|
Ribosomal protein S21
|
9
|
PF04224.14
|
1.0
|
2
|
2878.0
|
same-strand
|
Protein of unknown function, DUF417
|
++ More..