Result : P64546
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein YfgG |
| NCBI Accession ID | AE005174.2 |
| Organism | Escherichia coli O157:H7 |
| Left | 3415268 |
| Right | 3415459 |
| Strand | + |
| Nucleotide Sequence | GTGAGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCCGTTTTATCTACTCGTCCGTCGGTGCCTGGCAGCACCATCAGAGCAAAAAAGAAGCTCAGCAATCCACACTCTCCGTCGAATCACCGGTACAACGTTAG |
| Sequence | MSQATSMRKRHRFNSRMTRIVLLISFIFFFGRFIYSSVGAWQHHQSKKEAQQSTLSVESPVQR |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of pfam11119. Profile Description: Protein of unknown function (DUF2633). This family is conserved largely in the Bacillaceae family. Several members are named as YfgG. The function is not known. |
| Pubmed ID | 11206551 11258796 |
| Domain | CDD:402613 |
| Functional Category | Others |
| Uniprot ID | P64546 |
| ORF Length (Amino Acid) | 63 |
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| Conservation Analysis |
No. of Species: 61
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1117055 | 1117246 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 2 | 2618740 | 2618931 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 3 | 2629290 | 2629481 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 4 | 2582483 | 2582674 | + | NZ_AP014857.1 | Escherichia albertii |
| 5 | 3345567 | 3345758 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 6 | 3155005 | 3155196 | + | NZ_LR134340.1 | Escherichia marmotae |
| 7 | 4842206 | 4842397 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 8 | 595207 | 595398 | + | NZ_CP053416.1 | Salmonella bongori |
| 9 | 2573824 | 2574015 | + | NC_013716.1 | Citrobacter rodentium ICC168 |
| 10 | 1946211 | 1946402 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 11 | 276161 | 276352 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 12 | 2621210 | 2621401 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 13 | 4211631 | 4211822 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 14 | 2880331 | 2880522 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 15 | 1485513 | 1485722 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 16 | 3363317 | 3363508 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 17 | 1282279 | 1282488 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 18 | 1575951 | 1576160 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 19 | 1384564 | 1384755 | - | NZ_CP050508.1 | Raoultella terrigena |
| 20 | 358670 | 358861 | + | NZ_CP026047.1 | Raoultella planticola |
| 21 | 1334339 | 1334530 | - | NZ_CP041247.1 | Raoultella electrica |
| 22 | 3531251 | 3531439 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 23 | 1323172 | 1323363 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 24 | 1341888 | 1342079 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 25 | 1149093 | 1149293 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 26 | 4905099 | 4905299 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 27 | 3936511 | 3936702 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 28 | 4443998 | 4444189 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 29 | 1318089 | 1318280 | - | NZ_CP054254.1 | Klebsiella variicola |
| 30 | 3412595 | 3412783 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 31 | 2706404 | 2706592 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 32 | 1837665 | 1837856 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 33 | 540926 | 541117 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 34 | 3275216 | 3275416 | + | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 35 | 3201954 | 3202154 | + | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 36 | 799509 | 799709 | - | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 37 | 3839138 | 3839326 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 38 | 98372 | 98560 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 39 | 3433775 | 3433963 | + | NC_015968.1 | Enterobacter soli |
| 40 | 4746825 | 4747028 | - | NZ_CP038469.1 | Citrobacter tructae |
| 41 | 4487378 | 4487569 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 42 | 3519345 | 3519536 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 43 | 1436069 | 1436260 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 44 | 3727791 | 3727982 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 45 | 1199610 | 1199798 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 46 | 3741843 | 3742031 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 47 | 3420602 | 3420790 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 48 | 1304372 | 1304578 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 49 | 1255416 | 1255607 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 50 | 3444637 | 3444825 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 51 | 1303974 | 1304177 | + | NZ_CP033744.1 | Citrobacter freundii |
| 52 | 1171168 | 1171356 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 53 | 3138608 | 3138811 | + | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 54 | 247934 | 248137 | - | NZ_CP027107.1 | Cronobacter sakazakii |
| 55 | 977098 | 977301 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 56 | 2169564 | 2169752 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 57 | 1022126 | 1022317 | - | NZ_LR134201.1 | Cedecea lapagei |
| 58 | 1082290 | 1082445 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 59 | 1062492 | 1062683 | - | NZ_CP023525.1 | Cedecea neteri |
| 60 | 1247872 | 1248072 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 61 | 4960474 | 4960671 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 62 | 1022115 | 1022270 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LR134340.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF05231.16 | 0.98 | 60 | 352.0 | opposite-strand | MASE1 |
| 2 | PF00563.22 | 0.97 | 59 | 352 | opposite-strand | EAL domain |
| 3 | PF00551.21 | 0.92 | 56 | 6423 | same-strand | Formyl transferase |
| 4 | PF17941.3 | 0.95 | 58 | 4149 | same-strand | Polyphosphate kinase C-terminal domain 1 |
| 5 | PF13090.8 | 0.95 | 58 | 4149 | same-strand | Polyphosphate kinase C-terminal domain 2 |
| 6 | PF02503.19 | 0.95 | 58 | 4149 | same-strand | Polyphosphate kinase middle domain |
| 7 | PF13089.8 | 0.95 | 58 | 4149 | same-strand | Polyphosphate kinase N-terminal domain |
| 8 | PF13091.8 | 0.95 | 58 | 4149 | same-strand | PLD-like domain |
| 9 | PF02541.18 | 0.95 | 58 | 2603 | same-strand | Ppx/GppA phosphatase family |
| 10 | PF02769.24 | 0.8 | 49 | 7068 | same-strand | AIR synthase related protein, C-terminal domain |
| 11 | PF00586.26 | 0.8 | 49 | 7068 | same-strand | AIR synthase related protein, N-terminal domain |
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