Result : P64436

Protein Information

• Protein name: Uncharacterized protein YbcW
• NCBI Accession ID: AE005174.2
• Organism: Escherichia coli O157:H7
• Left: 1713104
• Right: 1713310
• Strand: +
• Nucleotide Sequence: ATGAATAAAGAACAATCTGCTGATGATCCCTCCGTGGATCTGATTCGTGTAAAAAATATGCTTAATAGCACCATTTCTATGAGTTACCCTGATGTTGTAATTGCATGTATAGAACATAAGGTGTCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGA
• Sequence: MNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLEAFRAIEAALVKHDNNMKDYSLVVD
• Source of smORF: Swiss-Prot
• Pubmed ID: 11206551 11258796
• Functional Category: Others
• Uniprot ID: P64436
• ORF Length (Amino Acid): 68

Conservation Analysis

No. of Species: 2

Sr.No.	Left Position	Right Position	Strand	NCBI Accession id	Species Name
1	38478	38684	+	NZ_CP068597.1	Paenibacillus sonchi
2	579880	580086	+	NC_000913.3	Escherichia coli str. K-12 substr. MG1655
3	1629267	1629473	+	NC_002695.2	Escherichia coli O157:H7 str. Sakai

Neighborhood Conservation Analysis

^* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
^* 'Small ORF' represents the entry/query analyzed.
^* Image generated using 'gggenes'(R-Package).

Neighborhood Representative Chosen(Species): NZ_CP068597.1

Sr.No.	Domain	Co-occurrence Frequency	No. of species in which domain occurs with smORF	Median distance b/w smORF and domain bearing ORFs	Orientation relative to smORF	PFAM Information
1	PF00959.21	1.0	2	1770	same-strand	Phage lysozyme
2	PF03245.15	1.0	2	1312	same-strand	Bacteriophage Rz lysis protein
3	PF07166.13	1.0	2	286	opposite-strand	Protein of unknown function (DUF1398)
4	PF07471.14	1.0	2	748	same-strand	Phage DNA packaging protein Nu1
5	PF05876.14	1.0	2	1268.0	same-strand	Phage terminase large subunit (GpA)
6	PF02831.17	1.0	2	3190.0	same-strand	gpW
7	PF05136.15	1.0	2	3393.0	same-strand	Phage portal protein, lambda family