* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP068597.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00959.21
|
1.0
|
2
|
1770
|
same-strand
|
Phage lysozyme
|
2
|
PF03245.15
|
1.0
|
2
|
1312
|
same-strand
|
Bacteriophage Rz lysis protein
|
3
|
PF07166.13
|
1.0
|
2
|
286
|
opposite-strand
|
Protein of unknown function (DUF1398)
|
4
|
PF07471.14
|
1.0
|
2
|
748
|
same-strand
|
Phage DNA packaging protein Nu1
|
5
|
PF05876.14
|
1.0
|
2
|
1268.0
|
same-strand
|
Phage terminase large subunit (GpA)
|
6
|
PF02831.17
|
1.0
|
2
|
3190.0
|
same-strand
|
gpW
|
7
|
PF05136.15
|
1.0
|
2
|
3393.0
|
same-strand
|
Phage portal protein, lambda family
|
++ More..